Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,441,837 G→C 15.7% intergenic (‑94/+17) hslJ ← / ← ldhA heat‑inducible lipoprotein involved in novobiocin resistance/fermentative D‑lactate dehydrogenase, NAD‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,441,8370GC15.7% 365.2 / 58.4 141intergenic (‑94/+17)hslJ/ldhAheat‑inducible lipoprotein involved in novobiocin resistance/fermentative D‑lactate dehydrogenase, NAD‑dependent
Reads supporting (aligned to +/- strand):  ref base G (56/62);  new base C (8/14);  total (64/77)
Fisher's exact test for biased strand distribution p-value = 3.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-04

Only 100 of 143 total aligned reads displayed.

CTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAG  >  NC_000913/1441738‑1441936
                                                                                                   |                                                                                                   
cttcATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATg                                                                                                     >  2:849344/1‑100 (MQ=255)
 ttcATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGc                                                                                                    >  1:1700288/1‑100 (MQ=255)
 gtcATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGc                                                                                                    >  1:3460470/2‑100 (MQ=255)
    aTTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAgg                                                                                                 <  1:3404594/100‑1 (MQ=255)
    aTTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAgg                                                                                                 <  1:248473/100‑1 (MQ=255)
      tttgtgtcttAATTACAGTTTCTGGTTCAGGACTATTTTAAGCATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAgggg                                                                                               <  2:3834650/94‑1 (MQ=255)
       gtgGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGa                                                                                              >  1:771735/1‑100 (MQ=255)
        tgGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAg                                                                                             <  1:3699637/100‑1 (MQ=255)
        tgGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAg                                                                                             <  1:1501280/100‑1 (MQ=255)
         ggTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGc                                                                                            <  2:108685/100‑1 (MQ=255)
          gTTCTCAATTTAAGTTTCTCACTCAGTTCTATTTTACGAATTGTGGATGAAAGGTCATTGGGGATTATCTGAACCAGCTCCCCTGCATTCCAGGGGAGct                                                                                           <  1:2280261/100‑2 (MQ=255)
          gTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGc                                                                                            <  1:830079/99‑1 (MQ=255)
           ttCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGctg                                                                                          <  1:629254/100‑3 (MQ=255)
           ttCTCAATTACAGTTTCTGACTCAGGACTATTATAAGAATAGAGGCTGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCgg                                                                                          >  2:1143320/1‑100 (MQ=255)
            tctcAATTACAGTTTCTGACTCAGGACTATTTTAATAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTTCCCTGCATTCCAGGGGAGctga                                                                                         <  2:672643/100‑4 (MQ=255)
              tcAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCTGGGGAGc                                                                                            >  2:3707223/1‑95 (MQ=255)
              tcAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTAGGGATTATCTGAATCAGCTCACCTGGAATGCAGGGGAGCGGCaa                                                                                       >  1:1600123/1‑100 (MQ=255)
               cAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCa                                                                                        >  2:3610614/1‑98 (MQ=255)
                aaTTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGa                                                                                     <  1:1198113/100‑1 (MQ=255)
                aaTTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGctgattca                                                                                     <  2:2955368/100‑8 (MQ=38)
                   tACAGTTTCTGTCTCATGACTATTTTAAGAATAGAGTATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGCATTCCAGGGGAGctgattcagat                                                                                  <  1:3569862/100‑11 (MQ=21)
                   tACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGAGATTATCTGAATCAGCTCCACTGGAATGCAGGGGAGCGGCAAGATTa                                                                                  >  2:407556/1‑100 (MQ=255)
                    aCAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTACCCTGGAATGCAGGGGAGCGGCAAGATTaa                                                                                 >  1:2703369/1‑100 (MQ=255)
                    aCAGTGTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAg                                                                                      <  2:2344883/95‑1 (MQ=255)
                     cAGTTTCTGACTCAGGACTATTTTAAGAATAGAGTATGATAGGTTATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTaaa                                                                                <  1:1223077/100‑1 (MQ=255)
                       gTTTCTGACTCAGGTTTATTTTTTTATTAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAAcc                                                                              <  1:975005/100‑1 (MQ=255)
                       gTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAAcc                                                                              <  1:2193572/100‑1 (MQ=255)
                       gTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAAcc                                                                              <  1:737312/100‑1 (MQ=255)
                         ttCTGACTCATGACTATTTTAAGAATAGAGGATGAAAGTTCATTGGGTATTATCTGAATCAGCTCCCCTTGAATTCAGGTTAGCGGCAAGATTAAACCAg                                                                            <  2:1886095/100‑1 (MQ=255)
                           cTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAgtt                                                                          <  1:3013611/100‑1 (MQ=255)
                                 cAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGttcgttcg                                                                    <  1:1963811/100‑1 (MQ=255)
                                        aTTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGt                                                             >  1:3212089/1‑100 (MQ=255)
                                         ttttAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCACCACTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGt                                                             >  2:3436378/1‑99 (MQ=255)
                                          tttAAGAATAGAGGATGAAAGGTCATTGAGGATTATATGAATCAGCTCACCTGGAATGCAGGGGATAGGCAAGATTAAACCAATTCGTTCGGGCa                                                                >  2:1935122/1‑95 (MQ=255)
                                            tAAGAATAGAGGATGAAAGGTTATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCg                                                         <  1:353784/100‑1 (MQ=255)
                                            tAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCg                                                         >  2:581430/1‑100 (MQ=255)
                                            tAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCg                                                         <  2:3701127/100‑1 (MQ=255)
                                            tAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCg                                                         <  2:453236/100‑1 (MQ=255)
                                              aGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGcc                                                       <  1:3116378/100‑1 (MQ=255)
                                              aGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGcc                                                       <  1:1516276/100‑1 (MQ=255)
                                              aGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGcc                                                       >  2:3354802/1‑100 (MQ=255)
                                               gAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCt                                                      <  1:1623964/100‑1 (MQ=255)
                                                    gagGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTc                                                 >  2:1589310/1‑100 (MQ=255)
                                                     agGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTcc                                                <  2:515566/100‑1 (MQ=255)
                                                      ggATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTc                                                 >  2:142804/1‑98 (MQ=255)
                                                      ggATGAAAGGTCATTGGAGATTATCTAAATCAACTCCCCTGGAATGCAAGAAAACGACAAAATTAAACCAGTTCGTTCGAGCAAATTTAGCCTTTTTCCa                                               >  2:2305686/1‑100 (MQ=255)
                                                       gATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAg                                              <  1:3707911/100‑1 (MQ=255)
                                                        attaaaGGTCATTGGGTATTATCTGAATTAGCTTCTCTGGTATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCa                                               <  1:1724202/95‑1 (MQ=255)
                                                         tGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGAt                                            >  2:3513409/1‑100 (MQ=255)
                                                         tGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGAt                                            >  1:955044/1‑100 (MQ=255)
                                                           aaaGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTg                                          >  2:760573/1‑100 (MQ=255)
                                                           aaaGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTg                                          >  2:1900399/1‑100 (MQ=255)
                                                            aaGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGAttcc                                         <  1:2650040/100‑3 (MQ=255)
                                                             aGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGCGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCt                                        <  2:2507845/100‑1 (MQ=255)
                                                                tCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTaa                                     >  1:3227046/1‑100 (MQ=255)
                                                                  aTTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGt                                   >  1:1015629/1‑100 (MQ=255)
                                                                    tGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGttt                                 <  2:3831977/100‑1 (MQ=255)
                                                                    tGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGttt                                 <  1:3513448/100‑1 (MQ=255)
                                                                     ggggATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAg                                    >  1:3347888/1‑96 (MQ=255)
                                                                     ggggATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGtttt                                <  1:2556629/100‑1 (MQ=255)
                                                                     ggggATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAAAAAGTTAGTTAGGGAAGGTTTAGCCTTTTTAAAGATTGCTTAAGtttt                                >  1:2250352/1‑100 (MQ=255)
                                                                      gggATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTg                               >  1:2874854/1‑100 (MQ=255)
                                                                         aTTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAg                            <  1:3327154/100‑1 (MQ=255)
                                                                          ttATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGc                           >  2:3383833/1‑100 (MQ=255)
                                                                           tATCTGAATCAGCTCCCCTGGAATGTAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCg                          <  1:3520648/100‑1 (MQ=255)
                                                                           tATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCg                          <  1:1260270/100‑1 (MQ=255)
                                                                            taatcttgccgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGt                         >  1:724979/11‑100 (MQ=37)
                                                                            aTCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGt                         >  1:2690256/1‑100 (MQ=255)
                                                                            aTCTGAATCAGCGCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGt                         <  2:1315079/100‑1 (MQ=255)
                                                                              cTGAATCAGCTCCCCTGGAATGCAGGGGAGCTGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAg                       <  1:2207750/100‑1 (MQ=255)
                                                                              cTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAg                       >  2:2417321/1‑100 (MQ=255)
                                                                               tGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGt                      >  1:191246/1‑100 (MQ=255)
                                                                                  aTCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTg                   <  2:1290077/100‑1 (MQ=255)
                                                                                   tCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTga                  <  1:1589325/100‑1 (MQ=255)
                                                                                    ctgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 <  1:2420411/98‑1 (MQ=255)
                                                                                    ccgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 >  1:3578662/3‑100 (MQ=255)
                                                                                    ccgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 >  1:625322/3‑100 (MQ=255)
                                                                                    ccgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 >  1:1733682/3‑100 (MQ=255)
                                                                                    cAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCTGGCATGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 <  1:1011908/100‑1 (MQ=255)
                                                                                    cAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 <  2:2973689/100‑1 (MQ=255)
                                                                                    cAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgag                 <  1:3894187/100‑1 (MQ=255)
                                                                                     cgCTCCCCTGCATTCCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTgaga                >  1:1200336/2‑100 (MQ=255)
                                                                                      gCTCCCCTGGAATGCAGTGGAGCGGCAAGATTAAACAAGTTCGTTCGGGCAGGTTTCGCCTTTTTACAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGaa               >  2:716515/1‑100 (MQ=255)
                                                                                       cTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGaaa              >  2:2601696/1‑100 (MQ=255)
                                                                                       cTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGaaa              <  2:3147521/100‑1 (MQ=255)
                                                                                       cTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGaaa              >  1:445548/1‑100 (MQ=255)
                                                                                        tgcccggtaaTGGAGGGGTTCGGCAGGTTTAAAGGAGTTCGTTTGGGCAGGTTTCGCCTTGTTAAAGATTGCTTAAGTGTTGCAGCGTAGTCTgaga                <  2:1949265/89‑1 (MQ=255)
                                                                                        tCCTCTGGAGTGCAGGGGAGCGACAATATTAAACCAGTACCTTCGTGCATGTCTCGCCTTTTTCCAGGTTGCTTAAGTTTTGCAGCGTAGTCTGAGAAAt             <  2:3176595/100‑1 (MQ=255)
                                                                                        tCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAAt             <  1:1444905/100‑1 (MQ=255)
                                                                                        tCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTCCCAGACAGATTAAGTTTTGCAGCGTAGTCTGAGAAAt             >  1:661244/1‑100 (MQ=255)
                                                                                         ccccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCATGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATa            >  1:960032/1‑100 (MQ=255)
                                                                                          cccTGGAATGCAGGGGGGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCACATTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTATGAGAAATAc           >  1:1077750/1‑100 (MQ=255)
                                                                                           ccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACt          <  2:2972995/100‑1 (MQ=255)
                                                                                           ccTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACt          <  2:2690232/100‑1 (MQ=255)
                                                                                             tGGAATGCAGGTGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTgg        <  1:2335728/100‑1 (MQ=255)
                                                                                              ggAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGt       >  2:2475936/1‑100 (MQ=255)
                                                                                                aaTGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTACGTTTTGCAGCGTAGTCTGAGAAATACTGGTCa     <  2:422419/100‑1 (MQ=255)
                                                                                                 aTGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCag    >  2:1477525/1‑100 (MQ=255)
                                                                                                 aTGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCag    <  1:1659785/100‑1 (MQ=255)
                                                                                                  tGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGTGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCaga   <  1:3170094/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTTCATTGTGGTTCTCAATTACAGTTTCTGACTCAGGACTATTTTAAGAATAGAGGATGAAAGGTCATTGGGGATTATCTGAATCAGCTCCCCTGGAATGCAGGGGAGCGGCAAGATTAAACCAGTTCGTTCGGGCAGGTTTCGCCTTTTTCCAGATTGCTTAAGTTTTGCAGCGTAGTCTGAGAAATACTGGTCAGAG  >  NC_000913/1441738‑1441936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: