Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,449,050 T→A 20.4% intergenic (+32/+26) feaB → / ← tynA phenylacetaldehyde dehydrogenase/tyramine oxidase, copper‑requiring

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,449,0500TA20.4% 300.6 / 67.5 141intergenic (+32/+26)feaB/tynAphenylacetaldehyde dehydrogenase/tyramine oxidase, copper‑requiring
Reads supporting (aligned to +/- strand):  ref base T (69/42);  new base A (14/15);  total (84/57)
Fisher's exact test for biased strand distribution p-value = 2.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01

Only 100 of 143 total aligned reads displayed.

CCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTA  >  NC_000913/1448952‑1449149
                                                                                                   |                                                                                                   
ccGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCACTCCTAAGTACAAAACGGCACCTg                                                                                                    >  2:2980116/1‑100 (MQ=255)
   tGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATATGTAAAAAACGGCACCTGGTg                                                                                                 <  2:2392971/100‑1 (MQ=255)
           gCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGttttt                                                                                         >  2:3435977/1‑100 (MQ=255)
           gCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGttttt                                                                                         <  1:2057762/100‑1 (MQ=255)
           gCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGttttt                                                                                         <  1:803089/100‑1 (MQ=255)
           gCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGttttt                                                                                         <  1:803352/100‑1 (MQ=255)
            ccccGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGtttttt                                                                                        <  2:3643085/100‑1 (MQ=255)
             cccGACTGGCTGGACGGTTGGTGTGAAACTAAGTTGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGtttttta                                                                                       <  2:2295721/100‑2 (MQ=255)
             cccGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGtttttta                                                                                       <  2:3873719/100‑2 (MQ=255)
               cGACTGGCTGGACGGTTGGTGTGAATCTAAGTCGGTGTGTGTACTGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGttttttacn                                                                                     <  1:622768/100‑4 (MQ=38)
               cGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAATCGGCACCAGGTGCCGttttttact                                                                                     <  2:631011/100‑4 (MQ=255)
                gACTGGCTGGACGGTTGGTGTGAAACTAAGTCTGTGTGTGTACGTTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTc                                                                                    <  1:1007901/100‑1 (MQ=255)
                gACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTTTGTACGGTATTAATCTGGTTCGCTCAGAAGTAAAAAAACGGCACCAGGTGCCGttttttact                                                                                     <  1:3103573/100‑4 (MQ=37)
                gACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGTTGCCGttttttact                                                                                     <  2:3653182/99‑4 (MQ=255)
                gACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGtttttt                                                                                        <  1:1735427/96‑1 (MQ=255)
                 aCTGGCTGGACGGTTGGTGTGAAATTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTg                                                                                      <  1:922577/97‑1 (MQ=255)
                 aCTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCt                                                                                   <  2:2625638/100‑1 (MQ=255)
                    ggctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCAGGTGCCGTTTTTTTGTCTGaa                                                                                >  1:3172671/1‑100 (MQ=255)
                     gctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGaaa                                                                               >  1:2679323/1‑100 (MQ=255)
                     gctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGaaa                                                                               <  1:3638960/100‑1 (MQ=255)
                      ctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGaaa                                                                               >  1:3062664/1‑99 (MQ=255)
                      ctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAAc                                                                              <  1:3702337/100‑1 (MQ=255)
                      ctggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAAc                                                                              <  1:2682285/100‑1 (MQ=255)
                       tggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACAACACCTGGTGCCGTTTTTTTGTCTGAAACa                                                                             >  1:2566082/1‑100 (MQ=255)
                        ggACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAACAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACa                                                                             >  2:1191303/1‑99 (MQ=255)
                          aCGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATc                                                                          <  1:2523815/100‑1 (MQ=255)
                           cGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCa                                                                         >  2:2973650/1‑100 (MQ=255)
                           cGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCa                                                                         >  1:1757594/1‑100 (MQ=255)
                            ggTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCAc                                                                        >  2:2215200/1‑100 (MQ=255)
                             gTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACt                                                                       >  1:2389173/1‑100 (MQ=255)
                             gTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACt                                                                       >  2:334149/1‑100 (MQ=255)
                                 gtgtGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtc                                                                   <  2:3448709/100‑1 (MQ=255)
                                 gtgtGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtc                                                                   <  1:431368/100‑1 (MQ=255)
                                  tgtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtct                                                                  >  1:1180855/1‑100 (MQ=255)
                                  tgtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtct                                                                  >  1:3889975/1‑100 (MQ=255)
                                   gtgAAACTAAGTCGTTGTGTGTACGATATTAATCTGATTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtctt                                                                 >  2:2146337/1‑100 (MQ=255)
                                   gtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtctt                                                                 >  2:315494/1‑100 (MQ=255)
                                   gtgAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtctt                                                                 >  1:1128513/1‑100 (MQ=255)
                                     gAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCAACTGATGCCGTATTTTTGTCTGAAAAAATCACTTAtctttc                                                               >  1:962003/1‑100 (MQ=255)
                                      aaaCTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtctttct                                                              <  1:1525296/100‑1 (MQ=255)
                                       aaCTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTAtctttctt                                                             >  2:106095/1‑100 (MQ=255)
                                        ttccgatctgtgtgtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTttcttc                                                            <  2:1901808/91‑1 (MQ=255)
                                        aCTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTttcttc                                                            <  2:2031868/100‑1 (MQ=255)
                                        aCTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTttcttc                                                            >  1:220769/1‑100 (MQ=255)
                                                 gtgtgtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAgatcggaa                                                   >  1:1901823/1‑93 (MQ=255)
                                                  tgtgtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTa                                                  >  1:2560678/1‑100 (MQ=255)
                                                     gtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCg                                               <  2:3919734/100‑1 (MQ=255)
                                                     gtgtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCg                                               >  2:1917056/1‑100 (MQ=255)
                                                       gtACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGtt                                             >  1:3395498/1‑100 (MQ=255)
                                                        tACGGTATTAATCTGGTTCGCTTATAAGTAAAAAACGGCATCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTg                                            <  1:1434752/100‑1 (MQ=255)
                                                         aCGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTgg                                           >  1:394600/1‑100 (MQ=255)
                                                           ggTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTATCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCg                                         >  1:3210281/1‑100 (MQ=255)
                                                           ggTATTAATCTGGTTCGCTCATAAGTAAAAAACCGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTATTCAGCGCAACTAGCGTAGGCg                                         >  1:1561426/1‑100 (MQ=255)
                                                           ggTATTAATCTGGTTAGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAAAAATACATTATCTTTGTTCATGGCACTTAGTGTTg                                            >  2:3586449/1‑97 (MQ=255)
                                                                tAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCg                                    >  2:297572/1‑100 (MQ=255)
                                                                tAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCg                                    >  1:1353301/1‑100 (MQ=255)
                                                                 aaTCTTGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAACCAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGttt                                      >  2:3444127/1‑97 (MQ=255)
                                                                 aaTCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGt                                   >  1:2428208/1‑100 (MQ=255)
                                                                 aaTCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGt                                   <  1:1355665/100‑1 (MQ=255)
                                                                   tCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCa                                 <  2:1240078/100‑1 (MQ=255)
                                                                      ggTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAaag                              >  1:3562604/1‑100 (MQ=255)
                                                                      ggTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCACCCCTAGCGTTGGCGTTTCGTCAaag                              >  1:1458440/1‑100 (MQ=255)
                                                                       gTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAaaga                             <  1:670864/100‑1 (MQ=255)
                                                                         tCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAaagaag                           <  2:2525788/100‑1 (MQ=255)
                                                                          cGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAACGCCCCTAGCGTTGGCGTATCGTCAaagaag                           >  1:2300953/1‑99 (MQ=255)
                                                                           gCTCATACGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGtt                         >  2:537564/1‑100 (MQ=255)
                                                                           gCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGAGTTTCGTAAAAGAAGt                          >  1:3699846/1‑99 (MQ=255)
                                                                            cTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTc                        >  1:3645060/1‑100 (MQ=255)
                                                                            cTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCATAGCGTTGGCGTTTCGTCAaagaag                           >  1:1561664/1‑97 (MQ=255)
                                                                             tCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTcc                       <  1:2277519/100‑1 (MQ=255)
                                                                               tcagacaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCa                      >  2:1114819/8‑100 (MQ=255)
                                                                                tAAGTAAAAAACGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGAGTTGGCGTTTCGTCAAAGAAGTTCCa                      >  2:3771531/1‑98 (MQ=255)
                                                                                cagacaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCAt                     >  2:2818255/7‑100 (MQ=255)
                                                                                 aaGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGATCCATg                    >  1:1883144/1‑99 (MQ=255)
                                                                                  gacaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATgg                   >  2:62525/5‑100 (MQ=255)
                                                                                  gacaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATgg                   >  1:679433/5‑100 (MQ=255)
                                                                                   gTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCCCTTATCTTTCTTAAGCGCCCCTAGCGTTAGCGTTTCGTCAAAGAAGTACCATgca                  >  1:320616/1‑97 (MQ=255)
                                                                                   gTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGtt                 >  1:3677495/1‑100 (MQ=255)
                                                                                   acaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGt                  >  2:3379203/4‑100 (MQ=255)
                                                                                   acaaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGt                  >  1:425668/4‑100 (MQ=255)
                                                                                    tAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGttt                >  2:1930339/1‑100 (MQ=255)
                                                                                    tAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGttt                >  2:3554808/1‑100 (MQ=255)
                                                                                    tAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTGCTTCAGAGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGttt                >  1:2408281/1‑100 (MQ=255)
                                                                                    caaaaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGtt                 >  2:1860353/3‑100 (MQ=255)
                                                                                      aaaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTc               >  1:986551/1‑100 (MQ=255)
                                                                                      aaaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTc               <  2:1766981/100‑1 (MQ=255)
                                                                                      aaaaaaCGGCACCAGGTGCCGTTGTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGAAATGGCGATTCGACAAAGAAAATCCATGGtt                 >  1:2411507/1‑98 (MQ=255)
                                                                                       aaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTca              >  1:1380778/1‑100 (MQ=255)
                                                                                       aaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTca              <  1:3169560/100‑1 (MQ=255)
                                                                                       aaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTca              >  2:3859155/1‑100 (MQ=255)
                                                                                       aaaaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTca              >  1:1892227/1‑100 (MQ=255)
                                                                                       aaaaaCGGCACCAGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTAGCGTTTCGTCAAAGAAGTTCCATGGTTTca              >  1:3229630/1‑100 (MQ=255)
                                                                                         aaaCGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTcagc            >  1:2684344/1‑100 (MQ=255)
                                                                                         aaaCGGCACCCGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTcagc            >  2:1546029/1‑100 (MQ=255)
                                                                                             ggCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCagag        <  2:2899789/100‑1 (MQ=255)
                                                                                             ggCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTGTCAGCagag        <  2:616398/100‑1 (MQ=255)
                                                                                              gCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGt       <  2:3096935/100‑1 (MQ=255)
                                                                                               cACCTGGTGCCGTTTTTTTTTTTTATATAATCACTTATATTTCTTACGCGCCCTTAGCGTTGGCGTTTCGTCAAAGTAGTTCCATGGTTTtagcag          >  2:403092/1‑96 (MQ=255)
                                                                                               cACCTGGTGCCGTTTTTTTGTTTTAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCagag        <  1:1515348/98‑1 (MQ=255)
                                                                                               cACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTa      <  2:2389151/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAATCTGGTTCGCTCATAAGTAAAAAACGGCACCTGGTGCCGTTTTTTTGTCTGAAACAATCACTTATCTTTCTTCAGCGCCCCTAGCGTTGGCGTTTCGTCAAAGAAGTTCCATGGTTTCAGCAGAGTATGTA  >  NC_000913/1448952‑1449149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: