| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,795,228 | G→C | 15.1% | intergenic (‑76/+25) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,795,228 | 0 | G | C | 15.1% | 326.1 / 48.8 | 126 | intergenic (‑76/+25) | btuC/ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (54/53); new base C (8/11); total (62/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-03 | |||||||||||
Only 100 of 134 total aligned reads displayed.
TTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCG > NC_000913/1795129‑1795327 | tgttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCaga > 2:2650320/1‑100 (MQ=255) tgttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCaga > 2:3351820/1‑100 (MQ=255) gttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGTTGAAGTGTTATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagag < 1:1479078/100‑1 (MQ=255) gttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagag > 2:2147975/1‑100 (MQ=255) gttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCagag < 2:3692078/100‑1 (MQ=255) ttgTCGGGCAAGTGTCAGCATTGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGc < 1:722205/100‑1 (MQ=255) ttgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCAAAAGTGAAAAGAAAAAAGGCCGCAGAGc > 1:2605937/1‑100 (MQ=255) tgGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCg < 1:1048000/100‑1 (MQ=255) ggCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCgg < 1:123846/100‑1 (MQ=255) gggCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTCTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCt < 1:2746817/100‑1 (MQ=255) gCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCttt > 1:3178828/1‑100 (MQ=255) cgatctCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:3452402/95‑1 (MQ=255) aaGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:52527/100‑1 (MQ=255) aaGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:2909131/100‑1 (MQ=255) aaGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:2671679/100‑1 (MQ=255) aaGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttt < 1:1477155/100‑1 (MQ=255) aGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTAGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCATTTtta > 2:2236317/1‑100 (MQ=255) gtgtCAGTATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGTCTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttc < 1:3791786/100‑3 (MQ=38) tgtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttct < 1:3538027/100‑4 (MQ=38) tgtCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttct < 2:3328664/100‑4 (MQ=38) gtCAGCATGGTATCTGTTCTGCTGAAGTGACATGGCGTTGATTTTGAGATGACTCTTAGAACGGGAAAAGAAAAAAGGCAGCCGAGCAGCGTTCtgagt > 2:3813328/1‑99 (MQ=255) tctgCATGGTATCCGTTCTGCTGAAGTTTCATGGCGTTGATTTTACGGTGACTCTTCTACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagtta < 2:1259496/97‑1 (MQ=255) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCTCTGCGGCCttttttctttt < 1:3596505/100‑7 (MQ=37) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagttag > 2:2514602/1‑100 (MQ=255) cAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTttagttag < 2:340381/100‑1 (MQ=255) aGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGa > 1:1954588/1‑100 (MQ=255) cATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGCCTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGTCTTTTTAGTTAGATc < 2:428013/100‑1 (MQ=255) cATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATc < 2:3821888/100‑1 (MQ=255) aTGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCa < 2:677118/100‑1 (MQ=255) tGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAg > 1:2615114/1‑100 (MQ=255) tGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAg > 1:3247682/1‑100 (MQ=255) ggTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGAGGCCTTTTTAGTTAGATCAGa > 1:1828676/1‑100 (MQ=255) gTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGAt < 2:1860655/100‑1 (MQ=255) tATCTGTTCTTCTGAAGTGTGATGGTGTTGATTTTACGGTGTCTTTTCAACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATc < 2:3149298/95‑1 (MQ=255) tATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAg < 2:3082636/97‑1 (MQ=255) tATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGAtt > 2:850038/1‑100 (MQ=255) ccGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACATTGAAAAGAAAAAAAGCCACAGAGCGGCCTGTTTAGTTAGAGCATATTACt > 1:3127439/1‑100 (MQ=255) cGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGGGCGGCCTTTTTAGTTAGATCAGATTACTc > 2:3125646/1‑100 (MQ=255) gTTCTGGTGGAGGGTCATGGCGTTGATTGTACGGCGGCTCTTCCGCAGTGAAAAGAAAATAGGCCGCAGTGCGGCCTTTTTAGTTAGATCAGATTACTCg < 2:2501623/100‑1 (MQ=255) gTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTc > 2:844946/1‑99 (MQ=255) gTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCg > 1:780554/1‑100 (MQ=255) ttCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAACGGCCTTTTTAGTTAGATCAGATTAATCg > 1:344623/1‑99 (MQ=255) tgctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCtt > 2:3882822/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACTGTGACTCTTCGAAAGTGAAAAGAAAAAAGACCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCttt > 2:2684903/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCttt > 1:103959/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCttt > 1:1479560/1‑100 (MQ=255) gctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCttt < 2:3564753/100‑1 (MQ=255) ctgAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTg > 1:2151337/1‑100 (MQ=255) tgAAGTGTCATGGCGTTGATTTTACGGTGTCTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTCAGTTAGATCAGATTACTCGTCTTTgg < 1:2388123/100‑1 (MQ=255) gAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTggg > 2:1132110/1‑100 (MQ=255) aaGTGTCCTGGCGTTGATTTTACGGTGACTCTTCGAGAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGc < 2:2598512/100‑1 (MQ=255) aaGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGc < 2:1983878/100‑1 (MQ=255) gtCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCATTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAg > 2:1922418/1‑100 (MQ=255) gtCATGGCGTTGATGTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAg < 2:2236448/100‑1 (MQ=255) cATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCg > 1:2928100/1‑100 (MQ=255) aTGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTAGGCGAAGCg > 1:1324392/1‑99 (MQ=255) gCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGtttt > 1:904946/1‑100 (MQ=255) gCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGtttt < 2:1790454/100‑1 (MQ=255) cGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTc > 2:3917654/1‑100 (MQ=255) cGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTc < 2:780545/100‑1 (MQ=255) gTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCg < 1:3728370/100‑1 (MQ=255) tGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAc < 2:2631463/100‑1 (MQ=255) tGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGAc > 2:1215900/1‑100 (MQ=255) cgatctggTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCg < 2:1172500/94‑1 (MQ=255) ttACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGc < 1:492015/100‑1 (MQ=255) tACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGTCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCt < 1:30397/100‑1 (MQ=255) cGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCttt > 1:1611099/1‑100 (MQ=255) cGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCttt > 1:2008728/1‑100 (MQ=255) ggTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCgagatcg > 1:1172512/1‑94 (MQ=255) aCTCTTCGACAGTGAAAAGAAAAAAGTCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCTTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAAc < 2:3576509/100‑1 (MQ=255) ctctTCGACAGTGAAAAGAACAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCttttt > 2:2392260/1‑96 (MQ=255) ctctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTAGGCGAAGCGTTTTCGACCCGGCTTTTTAACt > 1:2227483/1‑100 (MQ=255) tctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATGAGATTACTCGTATTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACtt > 2:793105/1‑100 (MQ=255) ctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTc > 2:1578031/1‑100 (MQ=255) ctTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATAAGATTACTCGTATCTGGGCGACGCGTTTTCGACCCGGCTTTTTAACt > 2:1189313/1‑98 (MQ=255) ctTCGACAGAGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACtt > 2:492550/1‑99 (MQ=255) tCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTg > 2:3474074/1‑100 (MQ=255) cAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCg > 1:827331/1‑100 (MQ=255) gaaaagaaaaAAGGCCGCAGAGCGGCTTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTc < 1:3246357/100‑1 (MQ=255) aaaagaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCt > 1:1963931/1‑100 (MQ=255) aaagaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTg > 1:2455607/1‑100 (MQ=255) aagaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTTCTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGa < 1:3248629/100‑1 (MQ=255) aagaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGa < 1:2384972/100‑1 (MQ=255) agaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGaa < 1:3746114/100‑1 (MQ=255) actaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGTGCGAAGCATTTTAGACAAGGCTTTTTAACTTCTGTACGGATATGaa > 1:1788946/4‑100 (MQ=19) actaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTTGACCTTGCTTTTTAACTTCTGCCCGGGTCTGaa > 2:314153/4‑100 (MQ=37) gaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg < 1:1506419/100‑1 (MQ=255) gaaaaAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAg < 1:1126242/100‑1 (MQ=255) ctaaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCATTTTAGACACGGCTTTTTAACTTCTGCCCGGGTCTGAAg > 1:431567/3‑100 (MQ=37) taaaaaGGCCGCTCTGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg > 1:2285508/2‑100 (MQ=39) aaaaaaGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg < 2:2861523/100‑1 (MQ=255) aaaaaaGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAgg < 1:3365565/100‑1 (MQ=255) aaaGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGAGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTca > 2:64178/1‑100 (MQ=255) aGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcacc < 1:1589378/100‑1 (MQ=255) aGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcacc > 2:602723/1‑100 (MQ=255) ggCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTcacca > 1:3599000/1‑100 (MQ=255) ccGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcg < 1:1510472/100‑1 (MQ=255) cGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcgc < 1:811152/100‑1 (MQ=255) cAGCGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGACGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCAcgcg < 2:1292212/99‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCg < 2:2933622/100‑1 (MQ=255) | TTGTTGGCGGGCAAGTGTCAGCATGGTATCCGTTCTGCTGAAGTGTCATGGCGTTGATTTTACGGTGACTCTTCGACAGTGAAAAGAAAAAAGGCCGCAGAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAACTTCTGCCCGGGTCTGAAGGTCACCACGCGCCG > NC_000913/1795129‑1795327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |