| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,810,062 | T→C | 15.1% | intergenic (+14/‑149) | yniC → / → ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,810,062 | 0 | T | C | 15.1% | 333.8 / 49.2 | 148 | intergenic (+14/‑149) | yniC/ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| Reads supporting (aligned to +/- strand): ref base T (64/61); new base C (12/10); total (77/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.36e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
AAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCAC > NC_000913/1809963‑1810161 | gcAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGAtc > 2:880128/1‑100 (MQ=255) cAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGAtct > 1:1151039/1‑100 (MQ=255) cAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGAtct > 1:94452/1‑100 (MQ=255) agaaTGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAAACATTCTCGATTAATG‑ACCAGGGGCAGTGAtct > 1:895153/3‑99 (MQ=255) tGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTg < 2:1544196/100‑1 (MQ=255) tGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTg < 1:3232309/100‑1 (MQ=255) gATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGc > 1:3678686/1‑100 (MQ=255) gATCCACGTTTTGTATTAGCAGACGTCAAACTTTCACCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGc < 1:2749044/100‑1 (MQ=255) tCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGccc > 1:3513650/1‑100 (MQ=255) tCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGccc > 2:1807484/1‑100 (MQ=255) ccACGTTTTTTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGcccc < 2:2982852/100‑1 (MQ=255) ccACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGcccc < 1:1807499/100‑1 (MQ=255) ccACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAAGGGCAGTGATCTCGATGcccc > 1:2456162/1‑100 (MQ=255) cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑TCCAGTGGCAGTGATCTCGCTGcccc < 2:2445254/99‑1 (MQ=255) cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCt > 2:419207/1‑100 (MQ=255) cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCt > 1:3795131/1‑100 (MQ=255) cACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAAAGAACCAGGGGCAGCGAGATCACTGcccc > 2:2116549/1‑100 (MQ=25) aCGTTTTGTATTAGCAGACGTCCCACTCTCATCGCTGATAGAACTCCCCGCAAAAGACGTTCTCGGTTACTG‑ACCAGGGGCAGCGCGATCACTGccccca < 2:2128178/100‑3 (MQ=255) aCGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTg > 2:2971694/1‑100 (MQ=255) aCGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGCGAGATCACTGCCCCTg < 1:1994608/100‑1 (MQ=38) gatcttGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTgn < 1:462391/96‑2 (MQ=255) cGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCTCACGACCTTCTCGGTTAATG‑ACCAGCGGCAGCGAGATCACTGCCCCTg < 2:784068/99‑1 (MQ=37) cGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTgg < 2:3679863/100‑1 (MQ=255) cGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAAAGAACCAGGGGCAGCGAGATCACTGCCCCTg < 1:2116568/100‑1 (MQ=25) tttttGTATTATCATACGTCAACCTGTTATCGTTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑TCCAGGGGCAGCGAGATCACTGCCCCt < 2:3198082/96‑1 (MQ=21) ttttGTGTTAGAAGAAGTCAAACTTTCATCGCTGGCAGAACTCACCGCAAAAGTCCTTCTCGGTTATTG‑ACCAGGGTTAGCGATATCACTGCCCCTgg < 2:385174/98‑1 (MQ=255) ttttGTATTAGCAGACTTCAAATTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGCGAGATCACTGCCCCTGGtc < 1:694566/100‑2 (MQ=37) tGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCtt < 2:2016621/100‑1 (MQ=255) gTATTAGCAGACGTCAAACTTTCATCGCTGCCAGTACTCACCTCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTTATCTCGCTGCCCCTGGTTCttt < 2:2937649/100‑1 (MQ=255) tATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTa < 1:880662/100‑1 (MQ=255) aTTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAt < 2:3570472/100‑1 (MQ=255) aTTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTAt > 2:3790289/1‑100 (MQ=255) gCAGACGTCAAACTTTAATCGATAAAAGAAAACACAGCAAAAGACATTATCGATTAATG‑ACCAAGGGAAGAGATTTAGATGCTCATGATTATTAATCt > 2:922547/1‑98 (MQ=255) cAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAATACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGa < 1:2681504/99‑1 (MQ=255) gACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAAt > 2:1012012/1‑100 (MQ=255) aCGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTCTCTGAAAtt > 2:1884039/1‑100 (MQ=255) cGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTg < 1:1678540/100‑1 (MQ=255) cAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTTTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCAt < 1:2365878/100‑1 (MQ=255) cAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGGTCTTTATCTGAAATTGCa < 2:1465653/99‑1 (MQ=255) aCTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCa < 2:1813643/100‑1 (MQ=255) cTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCaa > 2:477945/1‑100 (MQ=255) cTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCACTGGTTCTTTATCTGAAATTGCATTCaa > 1:1938477/1‑100 (MQ=255) tttCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAAc < 2:1603564/100‑1 (MQ=255) tttCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGATTAATG‑ACAAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAAc > 2:2516126/1‑100 (MQ=255) ttCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACt > 1:2261477/1‑100 (MQ=255) cATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGa > 2:512864/1‑100 (MQ=255) cATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGa > 1:2487022/1‑100 (MQ=255) cATCGCTGACAGAACTCACCGCAAAAGACCTTCCCGGTTAATG‑ACCAGGGCCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGACATTACATTCAACtca > 1:2894341/1‑98 (MQ=255) gACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTa > 2:267640/1‑100 (MQ=255) cAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAt < 2:1684455/100‑1 (MQ=255) aGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATc < 1:3429426/100‑1 (MQ=255) cTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTc > 1:1744776/1‑99 (MQ=255) cTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCa > 2:2871894/1‑100 (MQ=255) cTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCa > 2:1769243/1‑100 (MQ=255) cTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCa > 2:1101323/1‑100 (MQ=255) aCCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCTTGGTTCTTTATCTGAAATTGCATTCAACTGAC‑GATTAATccgtcagtt < 1:107519/100‑9 (MQ=255) cGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTa < 2:3678647/100‑1 (MQ=255) cAAAAGACCGTGTCGGTTCATG‑GCTAGGGGCAGTGATCTCGCTGCTCTTGTTTCTTTATCTGAAATTGCATTCAACTGATGGATTAATCGTCAAttt < 2:3386603/97‑1 (MQ=255) aaaaGTCCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAaga < 1:2772907/100‑1 (MQ=255) aaaaGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAaga > 2:2718489/1‑100 (MQ=255) aaaGACCTTCTCTGTTAATT‑ACCAGGGGCAGTTATCTCGCTTCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAaga < 1:2275324/99‑1 (MQ=255) aaaGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAagag < 1:2321263/100‑1 (MQ=255) ccTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTTAAAATGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAag < 2:2609550/99‑1 (MQ=255) ccTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAaga > 2:400819/1‑100 (MQ=255) ccTTCTCGGTTAATG‑ACCAGGGGAAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGAATTCAACTGACGGATTAATCGTCAATTTAAGAGAAaga > 2:937969/1‑100 (MQ=255) cTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAagag < 1:2987234/100‑1 (MQ=255) cTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAagag < 1:2742291/100‑1 (MQ=255) ctcGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTa > 2:3488415/1‑100 (MQ=255) ggTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTacac > 2:821692/1‑100 (MQ=255) ggTTAATG‑ACCAGGGACAGTGATCTCGCTGCCCATGGTTCTTTATCTGAAATTGCATTCAACTGACGGATAACTCGTCAATTTAAGAGAAAGAGTTaca > 2:2353649/1‑99 (MQ=255) tttAATT‑ATCAGGTGCACTGATCTCTCTGCCCCTTGTTCTTTATCTGAAATTACATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTacac < 1:937980/98‑1 (MQ=255) gTTAATG‑ACCAGGGGCAGTGATCTCGCTGTCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAAGCGTCAATTTAAGAGAAAGAGTTACAcc < 1:1354389/100‑1 (MQ=255) gTTAATG‑ACCAGGGGCAGTGATCTCGCTGCTCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACAcc < 1:1287080/100‑1 (MQ=255) gTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACAcc > 2:3059756/1‑100 (MQ=255) ttAATG‑ACCAGTGTCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCg < 2:3298064/100‑1 (MQ=255) aagaaCCAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTc > 2:2025710/5‑100 (MQ=37) aTG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTca > 2:3115011/1‑100 (MQ=255) tG‑ACCAGGGGCAGTGATCTCGCTACCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcac > 2:1554809/1‑100 (MQ=255) g‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcacc < 2:3746140/100‑1 (MQ=255) g‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcacc < 2:3196818/100‑1 (MQ=255) aCCAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcacca > 1:3280093/1‑100 (MQ=38) aCCAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTAAATTTAAGAGAAAGAGTTACACCGTcacca > 1:2681320/1‑100 (MQ=37) ccAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcaccac > 2:3855939/1‑100 (MQ=255) ccAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcaccac > 2:1238407/1‑100 (MQ=255) ccAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTAAATTTAAAAGAAAGAGTTACACCGTcaccac > 1:334118/1‑100 (MQ=38) cAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATTTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTcacca < 2:966981/98‑1 (MQ=255) cAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt < 2:2492775/100‑1 (MQ=255) cAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt < 1:2773330/100‑1 (MQ=255) cAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGTATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt > 1:1812173/1‑100 (MQ=38) cAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt > 1:828104/1‑100 (MQ=38) cAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt > 1:2960072/1‑100 (MQ=38) cAGGGGCAGCGAGATCACTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt > 1:2867553/1‑100 (MQ=38) cAGGGGCAGCGAGATCACTGCCCCTGGATCTATATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACt > 2:178787/1‑100 (MQ=38) ggggCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTc < 1:2075586/100‑1 (MQ=255) ggCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCg > 2:1869653/1‑100 (MQ=255) ggCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCg < 1:813499/100‑1 (MQ=255) cAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTg < 1:3469098/100‑1 (MQ=255) aGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGc < 2:2780207/100‑1 (MQ=255) gTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCa < 2:1447097/100‑1 (MQ=255) gTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCa > 2:1325082/1‑100 (MQ=255) | AAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAATG‑ACCAGGGGCAGTGATCTCGCTGCCCCTGGTTCTTTATCTGAAATTGCATTCAACTGACGGATTAATCGTCAATTTAAGAGAAAGAGTTACACCGTCACCACTTCCGTGCAC > NC_000913/1809963‑1810161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |