Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,255,991 A→T 19.6% K213* (AAA→TAA) ‡ yeiL → putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,255,9910AT19.6% 371.1 / 83.8 168K213* (AAA→TAA) yeiLputative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (70/64);  new base T (18/15);  total (89/79)
Fisher's exact test for biased strand distribution p-value = 8.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.50e-01

Only 100 of 171 total aligned reads displayed.

TCATTCACGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCGAGCATTACGC  >  NC_000913/2255893‑2256090
                                                                                                  |                                                                                                   
 cattcaCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATaaa                                                                                                   <  2:1626308/100‑1 (MQ=255)
  attcaCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAAt                                                                                                  >  1:3736059/1‑100 (MQ=255)
  attcaCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAAt                                                                                                  <  1:1729076/100‑1 (MQ=255)
   ttcaCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTTATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAAtt                                                                                                 <  1:3326923/100‑1 (MQ=255)
     caCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATtct                                                                                               <  1:3423269/100‑1 (MQ=255)
     caCGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTAGCGATGAAGATGAACCCGGAGAATAAATtct                                                                                               >  1:706800/1‑100 (MQ=255)
      actacgGTTTATTAATTAAAAGCAAGTAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATtctc                                                                                              <  1:2423382/97‑1 (MQ=255)
       caacgGATTATTAATTAAAAGCAAGAAAGGACATCTCATTAAAAACAGAAAGCAGTTATCAGGACTGGCGCTGGAGATAGACTCGGAGAATAAAATCTcc                                                                                             >  2:2314137/3‑100 (MQ=255)
        gacgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCg                                                                                            <  1:763517/100‑1 (MQ=255)
        gacgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCg                                                                                            <  1:1841096/100‑1 (MQ=255)
         acgGTTTATTAATTAAAAGTAAGAAAGGGTATCTCATTAAATACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCgg                                                                                           <  1:220548/100‑1 (MQ=255)
         acgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCgg                                                                                           <  2:2898074/100‑1 (MQ=255)
         acgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCgg                                                                                           <  1:274311/100‑1 (MQ=255)
          cgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  1:3271707/100‑1 (MQ=255)
          cgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  1:3416158/100‑1 (MQ=255)
          cgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  2:1951654/100‑1 (MQ=255)
          cgGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  2:1372718/100‑1 (MQ=255)
           ggTTTATTAATTAAAATCAAGAAAGGGTATCTCATTAAAATCAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  1:1434144/99‑1 (MQ=255)
           ggTTTATTAATTAAAAGCTAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGTCCCGGAGAATTTATTCTCCgggt                                                                                         <  2:2601985/100‑2 (MQ=255)
           ggTTTATTAATTAAAAGCCAGAAAGGGTATCACATTAAAAACAGTAAGCGGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCgggg                                                                                          <  2:416087/99‑1 (MQ=255)
           ggTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCgggt                                                                                         <  2:2837711/100‑2 (MQ=255)
           ggTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGga                                                                                         <  1:2548243/100‑1 (MQ=255)
           ggTCTATTAGTTAAAAGCAAGAATGGATATCTAAATAAAAACAGAAAGCAGTTATCAGGCCTGTCGCTGGGGATGGACTGGGAGAATAAATTCTCCGGga                                                                                         <  2:1724541/100‑1 (MQ=255)
            gTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAATACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATTTATTCTCCggg                                                                                          <  1:1074409/98‑1 (MQ=255)
            gTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGgat                                                                                        >  1:1192983/1‑100 (MQ=255)
            gTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGgat                                                                                        <  1:3925899/100‑1 (MQ=255)
            gTTTATTAATTAAAAGAAAGAAAGGTTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCTGAGAATAAATTCTCCGGgat                                                                                        <  2:2389143/100‑1 (MQ=255)
             tttATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAATCAGTTGTCATGACTGGCGCTGGAGATGGACCCTGAGAATAAATTCTCCGGgatg                                                                                       <  2:3928468/100‑1 (MQ=255)
               tattaATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGgatgat                                                                                     >  2:245908/1‑100 (MQ=255)
               tattaATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGgatgat                                                                                     >  1:602843/1‑100 (MQ=255)
               tattaATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGgacgat                                                                                     <  1:3006678/100‑1 (MQ=255)
                attaattaAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGatgatg                                                                                    >  1:1203469/1‑100 (MQ=255)
                   aattaaAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAg                                                                                 <  2:313765/100‑1 (MQ=255)
                    attaaAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGt                                                                                >  1:217051/1‑100 (MQ=255)
                      taaAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGAAAAAAAACAAGAAAAATAAAATCTCCAGAATGATACAGaaa                                                                              >  1:1570713/1‑100 (MQ=255)
                        aaaGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTaaaa                                                                            >  1:2545383/1‑100 (MQ=255)
                        aaaGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACACGGAGAATAAATTCTCCGGGATGATGCAGTaaaa                                                                            >  2:3230126/1‑100 (MQ=255)
                        aaaGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGATGGAGATGGAAACGAAGAATAAATTCTCCGGAATGATGCAGTaaaa                                                                            >  1:872245/1‑100 (MQ=255)
                           gCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTAGCGCGGGAGATGGACACGGAGAATAAATACTCCGGGATGATGCAGTAGAAatt                                                                         >  2:1346422/1‑100 (MQ=255)
                            cAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGATGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAatta                                                                        >  1:1580473/1‑100 (MQ=255)
                              aGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAattatt                                                                      <  1:3381372/100‑1 (MQ=255)
                              aGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCAGAGAATAAATTCTCCGGGATGATGCAGTAAAAattatt                                                                      <  2:2400740/100‑1 (MQ=255)
                                 aaGGGTATCTCATTAAAAACAGATAGCTGTTGTCAAGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTc                                                                   <  1:2065343/100‑1 (MQ=255)
                                      tATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAg                                                              <  2:2784470/100‑1 (MQ=255)
                                          tcATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGcgcg                                                          >  2:3454498/1‑100 (MQ=255)
                                          tcATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGcgcg                                                          >  2:2861287/1‑100 (MQ=255)
                                          tcATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGAAGTAAAAATTATTTTCAATAGcgcg                                                          >  1:1106204/1‑100 (MQ=255)
                                           cATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGa                                                         >  1:2948235/1‑100 (MQ=255)
                                            aTTAACAACAGAAAGCAGTTGTCAAGAATGGCGCAGGAGATGGACCCGGAGAATCAATTCCCCGGGCTGATGCAGTAAACATTATTTTCAATAccgacat                                                        >  2:2326012/1‑96 (MQ=255)
                                            aTTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGa                                                         <  1:1868307/99‑1 (MQ=255)
                                            aTTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGAt                                                        >  2:2948529/1‑100 (MQ=255)
                                            aTTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGAt                                                        >  1:3627605/1‑100 (MQ=255)
                                             ttAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGAtt                                                       <  2:1513523/100‑1 (MQ=255)
                                               aaaaaCAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGc                                                     >  2:3836177/1‑100 (MQ=255)
                                               aaaaaCAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGc                                                     >  2:2177273/1‑100 (MQ=255)
                                                aaaaCAGAAAGCAGTTGTCAGGACTGACGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGcc                                                    >  2:764274/1‑100 (MQ=255)
                                                 aaaCAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCg                                                   <  2:1160364/100‑1 (MQ=255)
                                                       aaaTCAGTTTTCAGGACGTGCGCTGTTGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATg                                               <  1:1687695/98‑1 (MQ=255)
                                                         aGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAAc                                           >  2:3099547/1‑100 (MQ=255)
                                                          gCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACg                                          >  2:3506408/1‑100 (MQ=255)
                                                           taGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGc                                         <  2:3365842/99‑1 (MQ=255)
                                                            aGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGATTAAATTCTCTGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGc                                         <  1:115905/99‑1 (MQ=255)
                                                             gTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCtt                                       >  1:2104057/1‑100 (MQ=255)
                                                             gTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCAGAtcggaagagc                                       >  2:488824/1‑91 (MQ=255)
                                                                  cAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATAc                                  >  2:161654/1‑100 (MQ=255)
                                                                    ggACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGt                                >  2:1993059/1‑100 (MQ=255)
                                                                     gACTGGCGTTGGAGATTTACCCGGATAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGt                                <  1:2725546/99‑1 (MQ=255)
                                                                     gACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGtt                               <  2:2795773/100‑1 (MQ=255)
                                                                       cTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGtttt                             >  1:3773723/1‑100 (MQ=255)
                                                                          gcgcTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATc                          <  1:2978789/100‑1 (MQ=255)
                                                                          gcgcTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATc                          <  2:1660108/100‑1 (MQ=255)
                                                                          gcgcTGGAGATGGACCCGGAGAATAAATTCTCCGGAATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATc                          <  2:1455806/100‑1 (MQ=255)
                                                                          gcgcTGGAGATGGACCCGGAGAATAAATTCTCAGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGtttt                             <  2:1755928/97‑1 (MQ=255)
                                                                           cgcTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATcc                         <  1:245913/100‑1 (MQ=255)
                                                                            gcTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCg                        <  1:3567580/100‑1 (MQ=255)
                                                                             cTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCgg                       <  2:3435132/100‑1 (MQ=255)
                                                                              tGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGt                      <  1:1579575/100‑1 (MQ=255)
                                                                              tGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGt                      <  2:1556594/100‑1 (MQ=255)
                                                                                 ataTGGATCCGGAGAATAAATTCTCCGGGATGATGTAGTAAAATTTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTc                     <  1:1278536/96‑1 (MQ=255)
                                                                                  gaTGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGACGGATGCAACGCTTAATACGTTTTATCCGGTCTAc                  >  1:1346078/1‑100 (MQ=255)
                                                                                  catcatcccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATAAGTTTTATCAGGTATAc                  >  1:3800857/7‑100 (MQ=37)
                                                                                    ttgACCCGGAGAATAAATTCTCCGGTATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGAAACGCTTAATACGTTTTATCCGGTCTACa                 <  1:176996/97‑1 (MQ=255)
                                                                                    tGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACaa                >  2:2734160/1‑100 (MQ=255)
                                                                                    tGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACaa                >  2:1013715/1‑100 (MQ=255)
                                                                                      gACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAAt              >  2:1060936/1‑100 (MQ=255)
                                                                                      atcccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGACTACAAAt              >  2:1361587/3‑100 (MQ=255)
                                                                                      atcccGGAGAATATATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAAt              >  1:2573956/3‑100 (MQ=255)
                                                                                       tcccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACaaa               >  2:3596968/2‑98 (MQ=255)
                                                                                       tcccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTACCGGATGCAACGCTTAATACGTTTTATACGGTCTACAAATc             >  1:1300938/2‑100 (MQ=255)
                                                                                        cccGGAGAATTTATTCTCCGGGATGCTGCAGTAAACATTCTTTTCAATAGCGCGATTGCCGAATGCAACGCTTAATACGATTTATCAGGTCTACaaa               >  1:681415/1‑97 (MQ=255)
                                                                                        cccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCg            >  2:1845619/1‑100 (MQ=255)
                                                                                        cccGGAGAATTTATTCTCCGGGATGATGCAGAAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATc             >  2:3765874/1‑99 (MQ=255)
                                                                                        cccGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCg            >  2:1030435/1‑100 (MQ=255)
                                                                                        cccGGAGAATAAACTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCg            <  2:3736020/100‑1 (MQ=255)
                                                                                         ccGGAGAATTTATTCTCCGGGCTGATGCAGTAAAAATTATTTTCAATATCGCGATTGCCAGATACAACGCATAATACGTTTTATCCGGTCTACAAATCGa           >  1:7490/1‑100 (MQ=255)
                                                                                         ccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCGa           >  2:2123033/1‑100 (MQ=255)
                                                                                         ccGGAGAATTTATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGAAACGCTTAATACGTTTTATCCGGTCTACAAATCGa           >  1:2607756/1‑100 (MQ=255)
                                                                                         ccGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCGa           >  1:50219/1‑100 (MQ=255)
                                                                                           ggAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCGAGc         <  1:2063749/100‑1 (MQ=255)
                                                                                                aTAAATTCTCCGGGATGAAACAGTAAAAAATATTTTCAATAACGCGATTGCCGGATGCAACACTTAATACGATTTATCCGGTCTACAAATCGAgactta     >  2:1444222/1‑94 (MQ=255)
                                                                                                  |                                                                                                   
TCATTCACGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAAAAATTATTTTCAATAGCGCGATTGCCGGATGCAACGCTTAATACGTTTTATCCGGTCTACAAATCGAGCATTACGC  >  NC_000913/2255893‑2256090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: