| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,286,145 | A→T | 15.6% | intergenic (+9/‑66) | yejM → / → proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,286,145 | 0 | A | T | 15.6% | 312.2 / 41.8 | 125 | intergenic (+9/‑66) | yejM/proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base A (51/54); new base T (7/13); total (58/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
CTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCAT > NC_000913/2286046‑2286244 | cTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATtata > 2:70631/1‑100 (MQ=255)cTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATtata > 1:3326336/1‑100 (MQ=255) tACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATaaa < 1:957767/100‑1 (MQ=255) tACGTGGTGAAAGAGTGAAACATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATaaa > 2:2396197/1‑100 (MQ=255) cGTGTTGAAAGAGTGAAAGATGAAAATCCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATc < 1:3122881/100‑1 (MQ=255) cGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTACTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATc < 1:575912/100‑1 (MQ=255) ttgtgaaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAg < 1:422542/98‑1 (MQ=39) tggtgAAATAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAg < 2:1884931/100‑1 (MQ=255) tggtgAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAg < 2:976719/100‑1 (MQ=255) tggtgAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATAGCTAACTGATTAATTATAAATCAg > 1:1252222/1‑100 (MQ=255) ggtgAAAGAGTGGAGGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATc < 2:1305012/97‑1 (MQ=255) gtgaaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGtt < 2:655668/100‑1 (MQ=39) gtgaaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAg < 2:2368015/98‑1 (MQ=255) tgaaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGATGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTa < 1:777440/100‑1 (MQ=255) aaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGTTAGc < 1:2905873/100‑1 (MQ=38) aaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGTTAGc < 1:3502702/100‑1 (MQ=38) aaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGTTAGc < 2:3823069/100‑1 (MQ=38) aaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGc < 1:1216473/100‑1 (MQ=255) aaagagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCATTTTATCTCTAACTGATTAATTATAAATCAGTTAGc < 2:258818/100‑1 (MQ=255) aagagtgaaagaTGAAAAACAACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGc > 2:1722267/1‑99 (MQ=255) agattgaaagaTCAAACACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGTTAGCg < 2:3452109/99‑1 (MQ=37) agagtgaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTTATAATTAATCAGTTAGCGa < 2:197427/100‑1 (MQ=38) tgaaagaTGAAAATCCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAata < 1:1483098/100‑1 (MQ=255) tgaaagaTGAAAAACCACGGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAata < 2:1395784/100‑1 (MQ=255) gaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAatat > 2:1451501/1‑100 (MQ=255) gaaagaTGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAatat > 2:1639205/1‑100 (MQ=255) tGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACt > 1:10366/1‑100 (MQ=255) tGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAAAAGCGTTTTATCGCTAACTGAATAATTATAAATCAGTTAGCGAAATATCTTACt > 1:3115998/1‑100 (MQ=255) aaaaaCCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTg > 2:1514616/1‑100 (MQ=255) aaaaCCACAGTTAAGTTTGTTATTGCAAGTGCTGACATACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGc < 1:128475/100‑1 (MQ=255) aaaCCACAGTTAAGTTTATTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCCAAATATCTTACTTGCa > 2:2280012/1‑100 (MQ=255) aCCACAGTTAAGTTTGTTATTGCAAGTGTTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAAt < 1:1646921/100‑1 (MQ=255) ccACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATc > 2:117660/1‑100 (MQ=255) attgaaGTTGGTTATTACAAGTGCTGAGAGACGAGAAGCGTTTTATCGATAACTGATTAATTATAAATCAGTTATCGAAATATCTTACTTGCAATCGgtg < 2:1850421/96‑1 (MQ=255) gTTAAGTTTGTTATTGCAAGTGCTGATAGACGAGTTGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCACTCGgtgt < 1:2047545/100‑1 (MQ=255) gTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGgtgt > 2:3577212/1‑100 (MQ=255) gTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGgtgt < 2:2672815/100‑1 (MQ=255) gTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGgtgt < 1:1870149/100‑1 (MQ=255) ttAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGtgtg < 1:3182007/100‑1 (MQ=255) aGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGaa > 2:3294294/1‑100 (MQ=255) gTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGaaa > 2:77512/1‑100 (MQ=255) tttGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGaaaa > 2:1339175/1‑100 (MQ=255) gTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACgg < 2:2443259/100‑1 (MQ=255) tATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGgta > 2:1690827/1‑100 (MQ=255) tATTGCAAGTGCTGACAGACGAGAAGCCTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGgt > 2:3900753/1‑99 (MQ=255) nttGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGgtag > 1:1363989/2‑100 (MQ=255) aTTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGgtag < 1:3535741/100‑1 (MQ=255) aTTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTGGCAATCGGTGTGGAAAACGgtag < 1:3375296/100‑1 (MQ=255) aTTGCAAGTGATGACAGACGAGAAGCGTTTTATCGCTAACTGATGAATTATAAAGCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACgg > 2:2775022/1‑97 (MQ=255) tGCAAGTGATGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGgtagta < 1:1916665/100‑1 (MQ=255) gCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTAt > 1:2422275/1‑100 (MQ=255) gCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTAt > 2:347409/1‑100 (MQ=255) gCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTAt > 2:3797430/1‑100 (MQ=255) gCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTAt > 1:3012828/1‑100 (MQ=255) cAAGTCCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTAtt > 2:1768464/1‑100 (MQ=255) aaGTGCTGACAGACGAAAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTATCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTa < 2:1855105/100‑1 (MQ=255) gTGCTGCCAGACAAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGTTGTGTAAAACGGTAGTATTagc < 2:1093005/100‑1 (MQ=255) tGCTGACAGACGATAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTagca < 1:1806635/100‑1 (MQ=255) tGCTGACAGACGAGAAGCGTTTTATCGCTAACTCATTAATTATAAATCAGTTAGCGAAATATCTTACTTACAATCGGAGTGGCAAATGGCAGTAt > 2:2575665/1‑95 (MQ=255) gCTGACAGACGAGAAGCGTTTTATCGGTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTACAATCGGTGTGGAAAACGGTAGTATTagcag > 1:2377685/1‑100 (MQ=255) gCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTagca > 1:2397770/1‑99 (MQ=255) tGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGTAAAACGGTAGTATTAGCAGcc < 2:474537/100‑1 (MQ=255) aCAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCAc < 1:2336134/100‑1 (MQ=255) cAGACGAGAATCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCATTCAGTGTGGAAAACGGTAGTATTAGCAGCCACg < 2:2569674/100‑1 (MQ=255) cAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCAc < 1:2695584/99‑1 (MQ=255) cAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACg > 1:2274412/1‑100 (MQ=255) cAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACg < 2:2805887/100‑1 (MQ=255) gACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAg > 1:1420887/1‑100 (MQ=255) gACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAg > 2:3932571/1‑100 (MQ=255) gACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGATGTGGAAAACGGTAGTATTAGCAGCCACGAg > 2:92218/1‑100 (MQ=255) aCGAGAAGCGTTTTATCGCTAACTGATTAATTATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAg < 1:221445/99‑1 (MQ=255) agaAGCGTTTTATCGCTAACTTATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCg < 1:1451516/99‑1 (MQ=255) agaAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCgg > 2:497827/1‑100 (MQ=255) gaAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGc > 1:3554760/1‑100 (MQ=255) aaGCTTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCa < 2:3427379/100‑1 (MQ=255) ttttATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAg < 2:1758167/100‑1 (MQ=255) ttATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTAATTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAgcg < 1:569459/100‑1 (MQ=255) tATCGCTAACTGATTAATTATAAATCAGTTAGCGCAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAgcgc > 1:167004/1‑100 (MQ=255) ttCGCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCa > 1:2529357/2‑100 (MQ=38) gCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGcc > 2:2610092/1‑100 (MQ=38) gCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGAAGCCACGAGTCGGCACGTAGCGCAGcc > 2:3492221/1‑100 (MQ=38) gCTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGATGTGGAAAACGGTAATATTAGCAGCCACGAGTCGGCaa > 2:2848772/1‑88 (MQ=37) gCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGcc > 1:1031938/1‑100 (MQ=255) ccaaCTGATTTATAATTAATCAGTTAGCGAAGTATCTTACTTACAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGc > 1:2648216/3‑98 (MQ=37) cTAACTGATTTATAATTAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAATAGGCACGTAGCGCAGcc > 1:1690520/1‑99 (MQ=37) cTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCt < 2:2253458/100‑1 (MQ=255) aCTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGt < 2:1031927/100‑1 (MQ=255) tGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAg > 2:3276811/1‑100 (MQ=255) tGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAg > 2:2960635/1‑100 (MQ=255) tGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAg > 1:1071934/1‑100 (MQ=255) gATTAATTATAAATCAGTTAGCGAATTATCTTACTTGCAACCGTTGTGGAAAACGGTATTATTAGCAGCTACGAGTCTTCACGTAGTGCAGCCTGGTAgc < 2:2420254/100‑1 (MQ=255) aattaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCAc < 2:2827946/100‑1 (MQ=255) aattaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCAc < 1:2221749/100‑1 (MQ=255) aattaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCAc > 2:2512166/1‑100 (MQ=255) attaTAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAATCGGCACGTAGCGCAGCCTGGTAgcgc > 2:3472286/1‑97 (MQ=255) tataAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGt > 2:430765/1‑100 (MQ=255) ataAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTc > 1:2936361/1‑100 (MQ=255) ataAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTc < 1:1797603/100‑1 (MQ=255) taAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCa < 2:419240/100‑1 (MQ=255) taAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCa > 1:1402033/1‑100 (MQ=255) | CTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAATTATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCAT > NC_000913/2286046‑2286244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |