| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,472,522 | C→T | 57.1% | A120A (GCG→GCA) | yfdN ← | CPS‑53 (KpLE1) prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,472,522 | 0 | C | T | 57.1% | 63.0 / 194.7 | 166 | A120A (GCG→GCA) | yfdN | CPS‑53 (KpLE1) prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base C (38/33); new base T (49/45); total (87/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 174 total aligned reads displayed.
TTCACCTGATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCGTTAGTGC > NC_000913/2472423‑2472619 | ttCACCTGATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATgcc < 2:398404/100‑1 (MQ=255) ccTGATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCa > 1:214070/1‑100 (MQ=255) tGATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATc > 2:3909924/1‑100 (MQ=255) gATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATcc < 1:578391/100‑1 (MQ=255) gATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATcc < 2:3511328/100‑1 (MQ=255) gATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTAGCTGGGAGTGGCTTTCACGGAATGCCGCCATcc > 1:3750748/1‑100 (MQ=255) gATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTCCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATcc < 1:2751405/100‑1 (MQ=255) tGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCcac > 1:1410114/1‑100 (MQ=255) gCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCcaca < 2:1599145/100‑1 (MQ=255) cAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCacac > 1:2637338/1‑100 (MQ=255) cAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCacac > 2:2038746/1‑100 (MQ=255) aGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACACGCCAGAAAATTGTTTCGTTCTGGCTGCGAGTGGCTTTCACGGAATGCTGCCATCcaca > 2:2402488/1‑98 (MQ=255) ccGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGtt < 1:2299924/100‑1 (MQ=255) gCTTACTGCTTTTCCGTAAACTCCTTTCACGACGCGCTATAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTgc < 1:1674639/100‑1 (MQ=255) gCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTgc < 2:1413650/100‑1 (MQ=255) ttACTGCTTTTCCGTTAACACCGTTCACTACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGATTGGCTTTCACGTAATTCTGCCATCCACCGCGTTgca < 2:2787011/99‑1 (MQ=255) ttACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTgcag < 2:1951598/100‑1 (MQ=255) ttACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTgcag < 1:1394332/100‑1 (MQ=255) tACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCCCACCGTTgcagc > 2:540583/1‑100 (MQ=255) tACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTgcagc < 2:105312/100‑1 (MQ=255) cttcTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCAACACCGTTGCAGCac > 2:1694785/4‑100 (MQ=255) cTGCTTTTCCGTTTTCACTGTTCACGTAACTACAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCac < 1:1313539/100‑1 (MQ=255) cTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCac < 1:3256830/100‑1 (MQ=255) cTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCac < 1:482994/100‑1 (MQ=255) gCTTTTCCGTAAACACCGTTCACTACGCGCCAGAAAATTGTTTCGTTCTGGCTGGCAGTGGCTTTCACGGAATTCTGCCATCCACACCGTTgca < 2:2155203/94‑1 (MQ=255) gCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCacga > 1:3397714/1‑100 (MQ=255) gCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACAGAATGCTGCCATCCACACCGTTGCAGCacg > 1:1988294/1‑99 (MQ=255) cTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCacgac > 1:1089476/1‑100 (MQ=255) ttttCCGTAAACACCGTTCACGTCGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCacga < 1:1482636/98‑1 (MQ=255) tttCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACgg < 2:214065/100‑1 (MQ=255) tCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGta > 1:2746614/1‑100 (MQ=255) tCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGta > 2:1459900/1‑100 (MQ=255) gTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATaa > 2:2524828/1‑100 (MQ=255) tAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAg < 2:1495936/100‑1 (MQ=255) tAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAg > 2:3401176/1‑100 (MQ=255) aaaCACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGc > 1:2261392/1‑100 (MQ=255) aaCACCGTTCAGGACGCGCCAGAAAATTGTTTAGTTCTGGCTGCGAGTGGCTTTAACGGAATGCTGCCATCCAAACCGTTGTAGCACGACAGTACAAGcc > 2:2465829/1‑100 (MQ=255) aaCACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACTCCGTTGCAGCACGACGGTATAAGcc < 2:3447690/100‑1 (MQ=255) aaCACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGcc > 1:3436882/1‑100 (MQ=255) acacCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGccc > 1:2347660/1‑100 (MQ=255) cgacGTTCACGACGCGCCAGAGAATTGTTTCGTGCTGGCTGGGAGTGGCTTTGACGGAATGCTGGCGTGCACTCCGTTGGAGCACGCCGGTATAAg < 2:2859934/93‑1 (MQ=255) cacCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGcccc > 1:3881902/1‑100 (MQ=255) cacCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGcccc < 1:2232258/100‑1 (MQ=255) cGTTCACGACGCGCCAGAAAATTGTTTCGTTTTGTCTGGGAGTTGCTTTCATGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTgg < 1:1209277/100‑1 (MQ=255) ttCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGAc > 1:3055381/1‑100 (MQ=255) gacgTGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAg < 2:1236135/100‑1 (MQ=255) gacgCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAg < 1:2510281/100‑1 (MQ=255) cgcCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttct < 1:714771/100‑1 (MQ=255) cgcCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttct > 1:2813128/1‑100 (MQ=255) cgcCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttct < 2:1038287/100‑1 (MQ=255) gcCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttctt < 2:715953/100‑1 (MQ=255) ccAGAATATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCAATCCACACCGTTGCAGCAGGACGGTATAAGCCCCTGGACTCCAGttcttc < 1:2597842/100‑1 (MQ=255) ccAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttcttc > 1:3486346/1‑100 (MQ=255) ccAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttcttc < 1:2599387/100‑1 (MQ=255) ccAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGttcttc > 2:424615/1‑100 (MQ=255) aGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCg < 1:3669399/100‑1 (MQ=255) aGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCg < 2:1362917/100‑1 (MQ=255) aaaaTTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGTCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGcc < 1:3558838/100‑1 (MQ=255) aaaaTTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTTCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTGCGcc < 2:689111/100‑1 (MQ=255) aaaaTTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGcc < 1:52601/100‑1 (MQ=255) aaaTTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCt < 2:858712/100‑1 (MQ=255) aTTGTTTCGTTCTGGCTGGGAGTGGCTTTCGCGGAATGTTGCCATCCACGCTGTTGCAGCACGACGGTATAAGTCTCTGGACTCCAGTTCTTCCg < 2:507442/95‑1 (MQ=255) aTTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTgg < 2:3038928/100‑1 (MQ=255) gTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCgg > 1:1063756/1‑100 (MQ=255) gTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGAACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCgg > 1:1212072/1‑100 (MQ=255) tttCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCggg < 1:3836675/100‑1 (MQ=255) ttCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGt > 2:1556018/1‑100 (MQ=255) tggTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTc < 1:2126284/98‑1 (MQ=255) cGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCa < 2:1471087/100‑1 (MQ=255) gTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCTCATCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAg < 2:2746590/100‑1 (MQ=255) gTTCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAg < 1:2449654/100‑1 (MQ=255) ttCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTgacccgccagg < 1:1383907/100‑11 (MQ=255) tCTGGCTGGGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGc < 2:288127/100‑1 (MQ=255) tggctggGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGca < 1:769445/99‑1 (MQ=255) ggctggGAGTGGCTTTCACGGAATGGCGGCATCCACACTGTTGCAGCACGATGGTATGAGACCGTGGACTCCCGTGGTTGCGCCTGACGAGTAAg > 2:2746056/1‑95 (MQ=255) ggctggGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGTGTCAGGcaca > 2:694849/1‑100 (MQ=255) ggctggGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGcaca > 2:1320608/1‑100 (MQ=255) gctggGAGTGGCTTTCACGGAATGCTGCCATACACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGcaca > 2:3165142/1‑99 (MQ=255) ctggGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACaaa > 1:286402/1‑100 (MQ=255) ctggGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACaaa > 2:279330/1‑100 (MQ=255) tggGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACaaaa < 2:2915784/100‑1 (MQ=255) tggGAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACaaaa > 2:1988494/1‑100 (MQ=255) ggAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATc < 1:3510235/100‑1 (MQ=255) ggAGTGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATc > 1:2948345/1‑100 (MQ=255) tGGCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCAccc < 2:1085347/100‑1 (MQ=255) ggCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCcg > 1:73935/1‑100 (MQ=255) ggCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCcg > 1:75741/1‑100 (MQ=255) gCTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCcgc < 2:2261372/100‑1 (MQ=255) cTTTCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCcgcg > 1:1678775/1‑100 (MQ=255) cTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCcgcg > 1:803726/1‑100 (MQ=255) ttCACGGAATGCTGCACTCCACACCGTTGCAGCACGACGGTATAAGCTCTTTTACTCCAGTTCTTCCGCCTGGCGTGTCAGGTACAATATCACCCGCggg < 2:3031552/100‑1 (MQ=255) ttCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCggg < 1:3789810/100‑1 (MQ=255) tCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGt < 2:1991435/100‑1 (MQ=255) tCACGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAATTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGt > 1:1062523/1‑100 (MQ=255) cACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTAACGGGTCAGACACAAAATCACCCGCGGGTc > 1:1611346/1‑100 (MQ=255) aCGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCg > 2:37765/1‑100 (MQ=255) aCGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGATCTTCCGAATGGCGGGTCAGGCACAAAATCACCCGCGGGTCg > 1:298319/1‑100 (MQ=255) cGGAATGCTGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCGt > 1:2323363/1‑100 (MQ=255) ggAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCGtt < 2:3001093/100‑1 (MQ=255) gccgccATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCGTTAGTGc > 1:3407892/1‑100 (MQ=255) | TTCACCTGATGCAGCCCGCTTACTGCTTTTCCGTAAACACCGTTCACGACGCGCCAGAAAATTGTTTCGTTCTGGCTGGGAGTGGCTTTCACGGAATGCCGCCATCCACACCGTTGCAGCACGACGGTATAAGCCCCTGGACTCCAGTTCTTCCGCCTGGCGGGTCAGGCACAAAATCACCCGCGGGTCGTTAGTGC > NC_000913/2472423‑2472619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |