| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,589,122 | G→A | 15.3% | G510S (GGC→AGC) | acrD → | aminoglycoside/multidrug efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,589,122 | 0 | G | A | 15.3% | 312.0 / 37.9 | 130 | G510S (GGC→AGC) | acrD | aminoglycoside/multidrug efflux system |
| Reads supporting (aligned to +/- strand): ref base G (68/41); new base A (14/6); total (82/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
GCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGA > NC_000913/2589023‑2589221 | gcgATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAg < 1:3915161/100‑1 (MQ=255) cgATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGGGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAgg < 2:3222267/100‑1 (MQ=255) cgATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGGGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAg < 1:3915089/99‑1 (MQ=255) tGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCtt > 1:2158490/1‑100 (MQ=255) ggTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTACCACTCTACTTAAGCCGTTGAAAAAAGATGAGCATCATGGGCAAAAAGGCttt > 2:3053135/1‑100 (MQ=255) gCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCtttttt < 1:743377/100‑1 (MQ=255) gCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGATGAGCATCATGGGCAAAAAGGCttttt > 1:3443609/1‑99 (MQ=255) cTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTATGACACAATACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCtttttt > 2:2019552/1‑99 (MQ=255) tGTCAGTACTGGTAGCGATGATCCTCTCTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTg < 1:2490792/99‑1 (MQ=255) tGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGc < 2:94471/100‑1 (MQ=255) tGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGc < 1:3012951/100‑1 (MQ=255) gTCAGTACTGGTAGCGATGTTCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAAGCCTTTTTGcc < 1:2321340/100‑1 (MQ=255) tCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCt > 1:1853305/1‑100 (MQ=255) tCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAAGCCTTTTTGccc < 2:3540289/100‑2 (MQ=255) cAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTg > 1:2464231/1‑100 (MQ=255) cAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAAGCCTTTTTGccca < 2:945844/100‑3 (MQ=255) cAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATAGGCAAAAAAGCCTTTTTGccca < 1:1864509/100‑3 (MQ=255) aGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTgg > 1:1778747/1‑100 (MQ=255) aGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTg < 2:383448/99‑1 (MQ=255) tACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGtt < 1:3455386/100‑1 (MQ=255) tACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGt > 2:3714150/1‑99 (MQ=255) aCTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGttt < 2:3558350/100‑1 (MQ=255) cTGGTCGCGATGATCCTAACTCCGGCTCTGTGTACCAGACTCCTTAAGCCACTGAAAAAAGGTGAGCCTCATGGGCAAAAAGGCTTTTTTGCCTGGTTTa > 2:2087767/1‑100 (MQ=255) ggTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAAGTGAACATCATAAGCAAAAAGGCTTTTTTGCCTGGTTTAAc > 1:187733/1‑100 (MQ=255) ggTAGCGATGATCCGCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTGTTTTGCCTGGTTTAAc > 2:2279277/1‑100 (MQ=255) tAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCa > 2:530657/1‑100 (MQ=255) cGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGAt > 2:3854550/1‑100 (MQ=255) cGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGAt > 1:2918720/1‑100 (MQ=255) cGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCAACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGAt > 2:216446/1‑100 (MQ=255) gatgatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGAt > 1:1851557/1‑99 (MQ=255) gatgatACTTACTCCGGATCTGTGTGCCACACTAATTAAGCCACTGAAAAAAGGTGAGCATCAGAGGCAAAAAGGCTTGGTTGCCTAGGTTAACCACAt > 2:1688010/1‑99 (MQ=255) gatCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGttt > 1:2529261/1‑100 (MQ=255) atCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTa > 2:3650160/1‑100 (MQ=255) atCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGACAAAAAGGCTTTTTTGCCTGGTTGAAACAGATGTTTa > 1:2275024/1‑100 (MQ=255) cTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAAcc > 1:1366787/1‑100 (MQ=255) tCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCg < 2:3821727/100‑1 (MQ=255) cACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGACAAAAAGGCTTTTTTGCCTGGTTTAACAAGATGTTTAACCGc > 1:100731/1‑100 (MQ=255) cACTCCGGCTCTGTGTGCCACACTACGTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGACTTTTTTGCCTGGTTTAACCAGATGTTTAACCGc > 2:3702898/1‑100 (MQ=255) cTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCaa > 1:2449603/1‑100 (MQ=255) ccGGCTCTGTGTGCCACACTACTTAAGCCACAGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACg > 2:413278/1‑100 (MQ=255) ggCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGcc < 1:640548/100‑1 (MQ=255) gCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCg > 2:2662360/1‑100 (MQ=255) gCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCg < 2:3511594/100‑1 (MQ=255) ctGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACACCGaa > 1:653342/1‑99 (MQ=255) tgtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCt > 2:559876/1‑100 (MQ=255) gtgCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTa < 2:50937/100‑1 (MQ=255) tggcacaCTACTTAAGGCACTGAAAAAATGTTATCATCATTTGCAAAAAGTCTGGTTTGCCTGGTTTAACCATATGTTTAACCGCAACGCCTAACGCTAc < 1:2739478/97‑1 (MQ=255) gCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACg > 1:3266428/1‑100 (MQ=255) cacaCTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAAACAGATGTTTAACCGCAACGCAGAACGATACGaa > 1:2563132/1‑100 (MQ=255) cacTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGaaaa > 2:2394604/1‑100 (MQ=255) ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAgggg > 2:3254097/1‑100 (MQ=255) ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAgggg > 2:251151/1‑100 (MQ=255) ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAgggg > 2:876175/1‑100 (MQ=255) ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAgggg < 2:2052475/100‑1 (MQ=255) ctTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAggg > 1:2591766/1‑99 (MQ=255) ttAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGt < 2:3888725/100‑1 (MQ=255) ttAAGCCACTGAAAAAAGGTGAGAATCATGGACAACAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCATCTCCGAACGATACGAAAAAGGGGt < 2:389357/100‑1 (MQ=255) tAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTg > 2:10270/1‑100 (MQ=255) tAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTg > 1:2596769/1‑100 (MQ=255) aaGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTgg < 2:2527315/100‑1 (MQ=255) gCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCg > 1:1029073/1‑100 (MQ=255) cTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaaaa < 2:2811704/100‑1 (MQ=255) cTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaaaa > 1:494624/1‑100 (MQ=255) tGAAAAAAGGTGATTATCATGGTGTAAATGGTTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGaaaa < 1:3543988/99‑1 (MQ=255) tGAAAAAAGGTGAGCATAATAAGAAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAAt < 2:1103533/100‑1 (MQ=255) gAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAGGGGGTGGCGAAAAtt > 2:543906/1‑100 (MQ=255) gAAAAAAGGTGAGCATCATGGGAAAAAAGGCTTTTTTGCATAGTTTAACCAAATGTTTAACAGAAACGACAAACACTAAGAAAAAAAGGTGGCGaaaa > 2:3599381/1‑98 (MQ=255) aaaaaaGGTGAGCATCATCGGGAAAAACGCCTTTTTGCCTGGTTTAACCATATGTTTATCCGCATTGAAAAAAAAAAAAAAAAAGGGGTGGCGAAAATtc < 2:165712/100‑1 (MQ=255) aaaaaGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtct < 1:1829258/100‑1 (MQ=255) aaaaGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATtctc < 2:1198797/100‑1 (MQ=255) aaaGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTcc < 2:784680/100‑1 (MQ=255) aaaGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCAAAAAGATAAAAAAAAGGGGTGGCGAAAATTCTcc < 2:1481787/100‑1 (MQ=255) aaaGGTGAGCATCACGAGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGTAAAAAAAAAAAAAAAAGGGGTGGCGAAAATTCTcc < 2:1480667/100‑1 (MQ=255) caGGTGAGCATCATGGACAAAAAGGCTTTTTTGCCTGGTTTAACCAGCGGTTTAACCGCAACGCCGAACGCTACGAAAAATGTGTGGCGACAATtct > 2:3660698/2‑97 (MQ=255) tGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGt > 2:584415/1‑100 (MQ=255) gAGCATCATGGGCAAAAAGGTTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAAAAAAAAAAGAAAAGAAAAAGGGGTGGCGAAAATTCTCCACCGt < 1:817758/99‑1 (MQ=255) taaaccaggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGcc > 1:1599683/8‑100 (MQ=38) atcatGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCt > 1:2960774/1‑100 (MQ=255) tcatGGGCAAAAAGGCTTTTTTGCCTGGTTTAATCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTg < 1:963356/100‑1 (MQ=255) aaccaggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTg > 2:2886158/6‑100 (MQ=255) accaggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgc > 2:833999/5‑100 (MQ=255) accaggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgc > 2:3233611/5‑100 (MQ=255) ccaggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGAGGTGGCGAAAATTCTCCACCGTAGCCTgcg > 1:2861821/4‑100 (MQ=255) caggCAAAAAAGCCTTTTTGTTTTTTTTTAACAGATGTTTAACCGCAACGTCGAACGCTATGAAAAAGGTGTTGCGAAAATTCTTCACCATAGCCt > 2:2273319/3‑96 (MQ=255) caggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTgcgc > 1:308805/3‑100 (MQ=255) caggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGCAGAGAAAATGCTCAACCGTAGCCTgcgc > 2:2484411/3‑100 (MQ=255) caggCAAAAAAGCCTTTTTGCCTGCTTTAACCAGATGTTTAACCGCAACGCCGAACGCTCCGAAAAAGGGCGGGCGAAAATTCTCCACCGTAGCCTgc > 2:1506267/3‑98 (MQ=255) gggCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt > 1:3562125/1‑100 (MQ=255) gggCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt < 1:3203512/100‑1 (MQ=255) gggCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt < 2:3443979/100‑1 (MQ=255) aggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt > 2:2198489/2‑100 (MQ=255) aggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt > 1:1178419/2‑100 (MQ=255) aggCAAAAAAGCCTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCt > 1:2291042/2‑100 (MQ=255) ggCAAAAAGGCTTTTTTGCCTTGTTTAACCAAATGTTTAACCGCAATGCCGTATGCTACGAAAAAGTGGTGGCGAAAATTCTCTACTGTAGTCttcact > 2:634226/1‑94 (MQ=255) ggCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTATCCACCGTAGCCTGCGCTg > 1:2311236/1‑100 (MQ=255) aaaaGGCTTTTTTGCCTGGTTTAACCGGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGAt < 2:3048210/99‑1 (MQ=255) aGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATtgtg < 1:10270/100‑1 (MQ=255) ggCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGa < 1:965300/100‑1 (MQ=255) ggCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCAACCGTAGCCTGCGCTGGATTGTGa > 1:1910890/1‑100 (MQ=255) ggCTTTTTTGCCTGGTTTAAACAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCCCCGTAGCCTGCGCTGGATtgtg < 2:2534863/99‑1 (MQ=255) | GCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGA > NC_000913/2589023‑2589221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |