| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,765,794 | (C)7→8 | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 97.1% | 348.8 / ‑4.6 | 107 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (3/0); major base C (48/53); minor base T (1/2); total (52/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑CC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765689‑2765881 | tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAACCGCTGGCCATCATCCCACATTT‑TGTGAAATG‑c > 1:1026384/1‑100 (MQ=255)tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑c > 1:423163/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCAAGTT‑TGTGGACTG‑cc‑c > 2:498974/1‑99 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cc > 1:2020749/1‑100 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cc > 2:2917311/1‑100 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c > 2:2821251/1‑98 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACTTCATCCCCCATTT‑TGTGGACTG‑cc‑c‑ccccc > 2:2258510/1‑99 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑ccccc < 1:936181/100‑2 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCTCCATTT‑TGTGGACTG‑cc‑c‑cccccgg > 2:2752308/1‑96 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cccccggt > 1:2552394/1‑96 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cccccggt < 2:503954/100‑5 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cccccggt < 1:1180973/100‑5 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAg < 1:892120/100‑1 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAg < 2:1695354/100‑1 (MQ=255) ataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGa < 1:953331/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGAc < 2:2703237/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGAc < 1:2885216/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGAc < 1:1057784/100‑1 (MQ=255) atTACTAAGTATCGAGTTGTTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑cc‑c‑cccccggtacccga > 1:259949/1‑90 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGAt < 2:375222/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATcc < 2:372191/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATcc < 1:2544609/100‑1 (MQ=255) tAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTg < 2:292116/100‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGc < 2:233082/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGccc > 2:2454716/1‑100 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGccc > 2:2725486/1‑100 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGccc < 2:2776217/100‑1 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTTGACGATCCTGcc > 1:1837347/1‑98 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGTCC‑C‑CCCCGGTAGACGATCCTGCCCta > 1:726607/1‑100 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCt > 2:113962/1‑99 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCACCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAg < 1:767036/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGtt > 1:1291643/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTgg < 2:423161/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTgg > 1:1971614/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTgg > 1:2712582/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTgg < 1:2821278/100‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGa < 2:2995326/100‑1 (MQ=255) gctactTGGCGAGATCAGGATGAGGGTACCGAAACGATGGAC‑TCCACCCCCATTTCTGGGGACTGTCC‑G‑CCCCGGTAGACGATCCTGCCCTATAGTTgg < 2:2741191/99‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAg > 1:2192973/1‑100 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAg < 1:609422/100‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAg < 2:1595146/100‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAg < 2:1609565/100‑1 (MQ=255) gctTGGTGAGATCGGGAAGAGGTTACCGAAACGATGGAAATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTg > 2:1904313/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCACATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:2014673/1‑100 (MQ=255) ctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGc < 2:1647769/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGGGTGcc > 1:1291649/1‑99 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 2:3036605/1‑100 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 1:1208195/1‑100 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑CC‑CACCCCGGTAGACGATCCTGCCATATAGTTGGAGTGccc > 1:2894438/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑CC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc > 2:918068/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATAT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTCCCCTATAGTTGGAGTGcccg > 2:758007/1‑99 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑CCAC‑CCCCGGTAGACGATCCTGCCGTATAGTTGGAGTGccccc > 1:759537/1‑100 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCATATAGTTGGAGTGCCCCCt < 2:522707/100‑1 (MQ=255) gggaTCAAGAAAAGGTTAACGAAACGATGGACAACATCCCCCCTTT‑TGTGGAATGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:257428/96‑1 (MQ=255) gagaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCAGTAGACGATCCTGCCCTATAGATGCCGAGccccc > 2:898530/1‑98 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAt < 1:2362245/100‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCACCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAt < 1:851314/100‑1 (MQ=255) aTCAGAAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt < 1:741532/99‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 2:1336519/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAg < 2:1466405/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 1:1202442/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 1:1776643/1‑100 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGGGTGCCCCCTATTCAgg > 1:1268580/1‑98 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 2:1971592/100‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 1:2975886/1‑100 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaaa < 1:113962/100‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtt < 1:968103/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCGCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:205748/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 1:2558454/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 2:2064529/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:2874984/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 2:1291638/100‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 2:1506435/100‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 1:108913/1‑100 (MQ=255) gAAACGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCGGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:1072652/100‑1 (MQ=255) cGATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt > 2:1767074/1‑100 (MQ=255) gATGGACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc > 2:264700/1‑100 (MQ=255) ggACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:1223075/100‑1 (MQ=255) ggACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:2917341/100‑1 (MQ=255) ggACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt > 1:442253/1‑100 (MQ=255) gACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa > 2:1533336/1‑100 (MQ=255) gACATCATCCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa > 2:819893/1‑100 (MQ=255) catcatCCGCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTTGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca < 2:1385744/100‑1 (MQ=255) tcatcCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATTCTGCCCTATGGTTGGAGTGGCCCCGTTTTAGGGGGGTAAATTTAGCAAATCAAtttc > 1:2175333/1‑95 (MQ=255) tcatcCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 1:644141/1‑100 (MQ=255) tcatcCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 2:1813814/1‑100 (MQ=255) tcatcCCCCATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 1:2191666/1‑100 (MQ=255) cccccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 1:1437178/1‑100 (MQ=255) cccccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 1:3081592/1‑100 (MQ=255) tcccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg < 2:2948956/99‑1 (MQ=255) ccccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 1:2098082/1‑100 (MQ=255) ccccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTACTCAGGCGGCTAAATCTAGCAAATCACTACACTTCAgg > 2:2085628/1‑100 (MQ=255) ccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:2742529/1‑100 (MQ=255) ccATTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:1074726/1‑100 (MQ=255) aTTT‑TGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:2729124/100‑1 (MQ=255) t‑tGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat > 2:1537681/1‑100 (MQ=255) t‑tGTGGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat < 1:835486/100‑1 (MQ=255) tgtgGACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatt > 1:2344419/1‑100 (MQ=255) gACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:1813834/100‑1 (MQ=255) gACTGCCC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:2652503/100‑1 (MQ=255) | TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTT‑TGTGGACTG‑CC‑C‑CCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765689‑2765881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |