| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,809,774 | (T)7→8 | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 96.2% | 357.3 / 5.1 | 106 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base T (43/59); total (44/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 130 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑TTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGT > NC_000913/2809668‑2809864 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑g > 1:2303158/1‑100 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t < 1:2583876/100‑1 (MQ=255) aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑tt > 2:2583862/1‑100 (MQ=255) ggagagagagTTTGCCGGTTGTGATTAGTTATATTCCGGTGGCCTTTGCGTGCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑tt < 2:2459145/94‑1 (MQ=255) gCAAAGACAGTTTACCCATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑tttt < 2:1805520/100‑1 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttt > 1:1643431/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttt > 2:2064296/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttt > 2:3033511/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttt > 2:589791/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑tttttt < 1:2330965/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttt < 1:2808065/100‑1 (MQ=255) gACAGTTTACGGATTGTTATTAGTTATATTCCGGGGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAATC‑G‑tgttttttc < 2:1628670/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttttc < 2:1975400/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttttc < 2:1096497/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttttc < 1:2193606/100‑3 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttttctc < 2:657954/100‑5 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑ttttttttctcc < 2:2121098/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCt > 2:974877/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCt > 1:747108/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTg < 1:1230968/100‑1 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGc < 1:2064320/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGTCCTTGGCGTTCGGTCTGAATGCGACCCGTCTTTGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGca < 2:1400229/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGca < 1:1828016/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGca < 2:2677308/100‑1 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGcat > 2:2863451/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGcatcat > 2:189541/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGcatcat > 2:1183908/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGcatcat > 2:2743877/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGATCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGcatcat > 2:1899879/1‑100 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTa < 1:2653247/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATg < 1:1309048/100‑1 (MQ=255) tattaGTTATATTCCGGTTGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGc < 2:2580502/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGc < 1:1567006/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAgg > 1:281425/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGgcg > 1:2810483/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGAGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATAAATGATGCAggag < 1:775996/100‑3 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGcgcg < 1:2687811/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATAAATGATGCAggagaa < 1:2004468/100‑5 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAg < 2:2092756/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCTTTATTTATGCAGGcgcg > 2:1655822/1‑97 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGc > 1:973610/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:705265/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:2526300/100‑1 (MQ=255) ccGGTGGCCTGTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg < 2:2020077/100‑1 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:1595875/100‑1 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:524224/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGCCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:65479/100‑1 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 2:903473/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:2978655/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:414292/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:1268857/1‑100 (MQ=255) cGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGAt > 1:979872/1‑100 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 1:1811770/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCGCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 1:589793/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 1:913371/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 1:1420770/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 2:921847/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑TTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:531694/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTTTTTTTTTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 2:1205334/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:3025805/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 1:2552841/1‑99 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:637384/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:904085/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:364454/100‑1 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg > 1:1232206/1‑100 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg < 2:2334188/100‑1 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGG‑TTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg < 1:1310959/100‑1 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg < 1:1310965/100‑1 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 2:2399659/1‑100 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:36913/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1211167/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1277554/100‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg > 2:2726644/1‑99 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:3073897/99‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:913362/100‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:1420758/100‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag > 1:363681/1‑100 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag > 2:3075508/1‑100 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt > 1:1603737/1‑100 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 1:1166309/1‑100 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 1:894562/100‑1 (MQ=255) nggATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 1:1969469/2‑100 (MQ=255) gggATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 2:477486/1‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTTTTTTTTTTTCTGTATCATTTATGCAGGTGCGTGCCAGTTCGTCATTACCTCGATGCTGGCCGCCGGGCATACTTtg > 2:693850/1‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 1:3033543/100‑1 (MQ=255) gATTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 2:747104/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTTCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg > 2:2847405/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:696276/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2399682/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2510209/100‑1 (MQ=255) tctctcCTCTCGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa < 2:1550957/100‑1 (MQ=255) ctctcctctcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt < 2:2196047/100‑1 (MQ=255) cctctcGAAAGC‑GTTTTTTTTTTTTTTTTTTATTTATGAAAGCGCGAGCCAGTTTGTTTTTAGCGCGGTGATGGACTCCGGGGGTATTTTGTtgcttgct > 2:2151815/1‑100 (MQ=255) ctctcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:155956/1‑100 (MQ=255) ctcgcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:767149/98‑1 (MQ=255) tctcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:1384995/1‑100 (MQ=255) ctcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 2:2568782/99‑1 (MQ=255) tcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:1573827/100‑1 (MQ=255) tcGAAAGC‑GTTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:2583885/100‑1 (MQ=255) gC‑G‑TTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGt > 2:828151/1‑100 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑TTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGT > NC_000913/2809668‑2809864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |