| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 98.4% | 446.8 / 0.1 | 126 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (65/58); total (67/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 | aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑c > 2:1597735/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑cccc > 2:1812900/1‑100 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑ccccc < 2:643065/100‑2 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑ccccc < 1:2673600/100‑2 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑ccccctgc > 2:321039/1‑96 (MQ=255) tttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGt > 2:1776199/1‑100 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTg < 2:464219/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGc < 1:188006/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCa > 1:2756173/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAg > 1:1126064/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAg > 2:1365810/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAg > 2:2902837/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAg > 2:373508/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGa > 1:1814735/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGa > 1:2198719/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGAt > 1:1548185/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGAt < 2:2416746/100‑1 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGAt > 1:3015513/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGAt > 2:2136395/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTcg > 1:664320/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTcg > 2:2506915/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTcg > 2:524022/1‑100 (MQ=255) agaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTcg > 1:896176/3‑100 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTcgcg < 1:2892183/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCgcgc < 2:2902876/100‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCgcgc < 2:2640910/99‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCa < 2:896167/100‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCa > 1:2850551/1‑100 (MQ=255) ccAGCCTCGCTTGCGACTGGCCTTTCTGACAGATGCTTGCTTACTCGCGGAACAGTGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAAc > 2:1907616/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑GGCCCCCTGCGTTTGCAGGATTTCGCGCAAAc < 1:828782/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAAc < 2:2873004/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAAc > 1:135427/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAAc > 1:162726/1‑100 (MQ=255) ccAGCCTCGCTTCAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCTATTC‑AGCCCCCAGCGTTTGCAGGAGCTCGCGCAAAc > 2:2345312/1‑100 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACg > 1:1260220/1‑100 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACg > 2:1027392/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGgc > 1:1676279/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAAC‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:722060/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAAC‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 2:1685425/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:705157/100‑1 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:839356/100‑1 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:1335110/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt < 2:356525/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:365666/1‑100 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:2292007/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:1439090/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGCTTTCGCGCAAACGGCGCAGGCCTTCAAcc > 2:2498679/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:1243286/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:200474/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:2104048/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:3067130/1‑100 (MQ=255) cgCCTTTCCGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:1365822/98‑1 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:1319035/1‑98 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa < 2:1126054/100‑1 (MQ=255) gtttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCACACGGCGCAGGCCTTCAACCTGa > 2:2929417/2‑99 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AACCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt < 2:722056/100‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 1:1186977/100‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc > 1:1218128/1‑100 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 1:321041/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:2764761/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:713156/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:2808331/1‑100 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:1580205/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:1955582/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 1:1812919/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 1:343551/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:2198696/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:1651715/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:1586468/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:1513351/1‑100 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 2:533706/100‑1 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 1:1233457/100‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:1439920/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:1188501/1‑100 (MQ=255) ttacttacTCGCGGAACAGCGCTTCGATATTC‑AGTCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTTGCGAACACGtt < 2:1626457/100‑1 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 2:1019097/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:1873001/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:915305/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:443158/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:193815/1‑98 (MQ=255) cgcgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1087802/1‑100 (MQ=255) gcgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg < 1:1597752/100‑1 (MQ=255) gcgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg < 1:1768133/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:1892069/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCATTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:1651697/100‑1 (MQ=255) ggAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:1319060/100‑1 (MQ=255) ggAACAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:238482/100‑1 (MQ=255) aaCAGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAAAGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 2:1696752/98‑1 (MQ=255) aGCGCTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 1:2902867/100‑1 (MQ=255) gcgcTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:1696779/1‑100 (MQ=255) cTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:1267926/100‑1 (MQ=255) cTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:664317/100‑1 (MQ=255) cTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:496186/1‑100 (MQ=255) cTTCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:549988/1‑100 (MQ=255) ttCGATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg < 2:2237753/100‑1 (MQ=255) gATATTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:671516/1‑100 (MQ=255) atatTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt > 1:683627/1‑100 (MQ=255) atatTC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 2:2695268/100‑1 (MQ=255) ttC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:1370076/100‑1 (MQ=255) ttC‑AGCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:650673/1‑100 (MQ=255) | ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTC‑AG‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |