New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =8 (0.060)90 (0.870) 64/166 0.5 94.4% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 4 (0.040)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 233 total aligned reads displayed.

CAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATC  >  NC_000913/1207693‑1207889
                                                                                                 |                                                                                                   
cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                   <  1:566255‑M1/100‑1 (MQ=255)
    tgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtttgttt                                                                                               <  2:118897‑M1/7‑1 (MQ=255)
    tgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                               <  2:2275395‑M1/7‑1 (MQ=255)
     gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatctcttcattttcataaacgTTGGTTTg                                                                                              >  1:1882881‑M1/93‑100 (MQ=255)
     acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                              >  1:2643633‑M1/1‑100 (MQ=255)
      cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                             <  2:1775419‑M1/100‑1 (MQ=255)
      cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                             >  1:492490‑M1/1‑100 (MQ=255)
       ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG                                                                                            <  2:2197172‑M1/100‑1 (MQ=255)
       tacgcgtacatagccaataagcatgttaaatccccctggtaatagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                            >  2:1543335‑M1/91‑100 (MQ=255)
       tacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                            >  1:1588216‑M1/91‑100 (MQ=255)
        tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                           <  1:2808452‑M1/100‑1 (MQ=255)
        tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                           <  2:2823511‑M1/100‑1 (MQ=255)
        tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                           <  1:743488‑M1/100‑1 (MQ=255)
        acgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                           >  1:614328‑M1/90‑100 (MQ=255)
         cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                          <  2:518366‑M1/12‑1 (MQ=255)
         cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                          <  1:2906429‑M1/12‑1 (MQ=255)
         cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                          <  2:1277001‑M1/12‑1 (MQ=255)
            gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                       <  2:1425413‑M1/15‑1 (MQ=255)
             cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                      <  1:849885‑M1/100‑1 (MQ=255)
              aCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGc                                                                                     >  2:2422165‑M1/1‑99 (MQ=255)
                 tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTATGGGAGAAGGAGCa                                                                                  <  2:2103055‑M1/20‑1 (MQ=255)
                  cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                 <  2:1441971‑M1/100‑6 (MQ=255)
                  agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaa                                                                                 <  1:2241434‑M1/21‑1 (MQ=255)
                    cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgca                                                                               <  2:2683769‑M1/100‑8 (MQ=255)
                    cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgca                                                                               <  2:2707784‑M1/100‑8 (MQ=255)
                         tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATAGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                          <  2:2166795‑M1/100‑13 (MQ=255)
                           gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                        <  1:138649‑M1/30‑1 (MQ=255)
                            tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                       >  2:1031775‑M1/1‑85 (MQ=255)
                            catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                       >  2:1845022‑M1/70‑100 (MQ=255)
                             tccgatctgcaagaatcCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                      <  2:1103823‑M1/92‑17 (MQ=255)
                             gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                      <  1:1750335‑M1/100‑17 (MQ=255)
                             atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                       >  2:2569607‑M1/69‑99 (MQ=255)
                              tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                     <  2:798327‑M1/33‑1 (MQ=255)
                               tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgg                                                                    >  1:2638629‑M1/1‑82 (MQ=255)
                               gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                    >  1:961911‑M1/67‑100 (MQ=255)
                               gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                    >  1:2027083‑M1/67‑100 (MQ=255)
                               gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                    >  1:2275418‑M1/67‑100 (MQ=255)
                                aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                   <  2:2876498‑M1/100‑20 (MQ=255)
                                aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                   >  1:1467128‑M1/1‑81 (MQ=255)
                                  gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                 >  2:1607358‑M1/1‑79 (MQ=255)
                                  gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                 >  1:639980‑M1/1‑79 (MQ=255)
                                  gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                 >  2:1410274‑M1/1‑79 (MQ=255)
                                       aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                            <  1:1501054‑M1/100‑27 (MQ=255)
                                        gcctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                           <  2:611724‑M1/43‑1 (MQ=255)
                                         gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                          >  1:2215935‑M1/1‑72 (MQ=255)
                                         cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                          <  1:1029573‑M1/44‑1 (MQ=255)
                                          aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                         <  1:145497‑M1/100‑30 (MQ=255)
                                          aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                         <  2:778491‑M1/100‑30 (MQ=255)
                                            tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                       <  2:848076‑M1/100‑32 (MQ=255)
                                            ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                       <  2:1434157‑M1/47‑1 (MQ=255)
                                              cGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                     <  1:1663453‑M1/100‑34 (MQ=255)
                                               aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                    >  1:118897‑M1/51‑100 (MQ=255)
                                                 ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                  <  1:1050932‑M1/100‑37 (MQ=255)
                                                 aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                  >  2:1661608‑M1/49‑100 (MQ=255)
                                                    gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                               <  1:1228521‑M1/100‑40 (MQ=255)
                                                    gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                               <  1:1877792‑M1/100‑40 (MQ=255)
                                                    caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                               >  2:2487058‑M1/46‑100 (MQ=255)
                                                    caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                               <  2:3052135‑M1/55‑1 (MQ=255)
                                                       atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                            >  1:2329029‑M1/1‑58 (MQ=255)
                                                        tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                           <  2:55887‑M1/100‑44 (MQ=255)
                                                           cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                        >  1:2474473‑M1/1‑54 (MQ=255)
                                                            atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                       >  1:235475‑M1/38‑100 (MQ=255)
                                                             tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                      >  2:373811‑M1/37‑100 (MQ=255)
                                                              gccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                     >  2:666332‑M1/36‑100 (MQ=255)
                                                               ccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                    >  1:965540‑M1/35‑100 (MQ=255)
                                                                catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                   >  1:712555‑M1/34‑100 (MQ=255)
                                                                 ggATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                  <  2:1134045‑M1/100‑53 (MQ=255)
                                                                 ggATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                  >  2:1704241‑M1/1‑48 (MQ=255)
                                                                 atttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                  <  1:3036323‑M1/68‑1 (MQ=255)
                                                                  gATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgtttgtgtcccggttccgtggccttcagccactccgccaa                                 >  1:1844259‑M1/1‑47 (MQ=255)
                                                                   aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac                                <  1:1168504‑M1/100‑55 (MQ=255)
                                                                     gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                              <  2:1376814‑M1/72‑1 (MQ=255)
                                                                      gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                             >  2:2402690‑M1/1‑43 (MQ=255)
                                                                       cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                            >  1:2515506/1‑100 (MQ=255)
                                                                            atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCggtttt                       >  1:2082951‑M1/22‑98 (MQ=255)
                                                                             tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                      >  1:1426125‑M1/21‑100 (MQ=255)
                                                                              cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                     >  1:2778418‑M1/1‑35 (MQ=255)
                                                                              cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                     >  2:2620519‑M1/1‑35 (MQ=255)
                                                                              cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                     >  2:2266976‑M1/1‑35 (MQ=255)
                                                                               tcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                    <  1:1682112‑M1/82‑1 (MQ=255)
                                                                               aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                    <  2:1792720‑M1/100‑67 (MQ=255)
                                                                                   ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgc                <  1:2266999‑M1/100‑71 (MQ=255)
                                                                                   ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgc                <  1:380856‑M1/100‑71 (MQ=255)
                                                                                    gCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca               <  2:1358172‑M1/100‑72 (MQ=255)
                                                                                    attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg               <  2:1403726‑M1/87‑1 (MQ=255)
                                                                                       ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg            >  2:1945066‑M1/1‑26 (MQ=255)
                                                                                        tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg           <  1:1741738‑M1/100‑76 (MQ=255)
                                                                                        tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg           >  1:1990617‑M1/1‑25 (MQ=255)
                                                                                        tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccaggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg           >  2:2028950‑M1/1‑25 (MQ=255)
                                                                                         cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt          <  2:2017872‑M1/92‑1 (MQ=255)
                                                                                         cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt          >  2:28526‑M1/1‑24 (MQ=255)
                                                                                          gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg         <  1:2700984‑M1/100‑78 (MQ=255)
                                                                                          gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg         >  1:2552485‑M1/1‑23 (MQ=255)
                                                                                          ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg         >  2:407508‑M1/8‑100 (MQ=255)
                                                                                          ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg         >  1:518367‑M1/8‑100 (MQ=255)
                                                                                           aaatCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg         <  2:2646848‑M1/99‑78 (MQ=255)
                                                                                             aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc      >  1:1909697‑M1/5‑100 (MQ=255)
                                                                                             aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc      >  2:2241411‑M1/5‑100 (MQ=255)
                                                                                               cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa    <  1:3008291‑M1/98‑1 (MQ=255)
                                                                                                gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt   <  1:2787663‑M1/99‑1 (MQ=255)
                                                                                                 |                                                                                                   
CAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATC  >  NC_000913/1207693‑1207889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.