Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,644,2890AC29.7% 237.8 / 154.2 166intergenic (‑6/+144)rlmN/ndkdual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent/multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'‑phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base A (69/47);  new base C (0/49);  total (69/97)
Fisher's exact test for biased strand distribution p-value = 2.50e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01

Only 100 of 166 total aligned reads displayed.

CCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAAT  >  NC_000913/2644196‑2644387
                                                                                             |                                                                                                  
cccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCgg                                                                                              <  2:550682/100‑1 (MQ=255)
 ccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGc                                                                                             >  1:950384/1‑100 (MQ=255)
  cGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGcc                                                                                            <  2:30715/100‑1 (MQ=255)
   gCATCTGCTGACGGTTGAGATCCAGCAGGTTGGTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCt                                                                                           >  2:336222/1‑100 (MQ=255)
   gCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCt                                                                                           <  2:2932459/100‑1 (MQ=255)
       ctgctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGtt                                                                                       >  2:394228/1‑100 (MQ=255)
         gctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttat                                                                                     >  1:238914/1‑100 (MQ=255)
            gACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTac                                                                                  >  2:2997229/1‑100 (MQ=255)
             aCGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTaca                                                                                 <  1:1479433/100‑1 (MQ=255)
              cGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTacac                                                                                >  1:2052554/1‑100 (MQ=255)
                gTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGt                                                                              <  2:2512751/100‑1 (MQ=255)
                gTTGAGATCCAGCAAGTTGATTTTTCCTTTTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGt                                                                              >  2:2736432/1‑100 (MQ=255)
                   gagaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTAt                                                                           >  2:56933/1‑100 (MQ=255)
                    agaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATg                                                                          >  1:347719/1‑100 (MQ=255)
                     gaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATgg                                                                         <  2:1491589/100‑1 (MQ=255)
                     gaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTAATgg                                                                         >  1:105145/1‑100 (MQ=255)
                        ccAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACCAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcc                                                                       >  1:61932/1‑99 (MQ=255)
                         cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                     >  1:1654653/1‑100 (MQ=255)
                         cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                     >  1:142732/1‑100 (MQ=255)
                           ggagGTTGATTTGTTCTGCTTTCGGGTTGAGTTTTTCAGGTGTGAGTAATTGTTCAGACATATGCTATGCCGGCCTCTTTATTATACGTTATGGcc                                                                       <  2:2798069/94‑1 (MQ=255)
                           gcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTg                                                                   <  1:195341/100‑1 (MQ=255)
                             agGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGa                                                                 >  1:1469184/1‑100 (MQ=255)
                              ggTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAg                                                                >  1:1642076/1‑100 (MQ=255)
                              ggTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAg                                                                >  2:928820/1‑100 (MQ=255)
                              ggTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAg                                                                >  1:1341018/1‑100 (MQ=255)
                               gTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAgg                                                               >  1:973588/1‑100 (MQ=255)
                               gTTGATTTTTCCATCTTGCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAgg                                                               <  2:244644/100‑1 (MQ=255)
                                 tGATTTTTCGATCTTTCGTTGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAgg                                                               <  2:2868648/98‑1 (MQ=255)
                                 tGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGt                                                             <  2:1774738/100‑1 (MQ=255)
                                  gATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCTGGCCTCGTTATTACACGTTATGGCCCCTGGCGGGtt                                                            >  2:180735/1‑100 (MQ=255)
                                      tttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaa                                                        >  1:2219989/1‑100 (MQ=255)
                                      tttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaa                                                        <  1:549902/100‑1 (MQ=255)
                                       ttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaa                                                       >  2:138990/1‑100 (MQ=255)
                                        tCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaaa                                                      <  1:2324301/100‑1 (MQ=255)
                                         ccATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaaaa                                                     <  1:264883/100‑1 (MQ=255)
                                          cATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAg                                                    >  1:2315390/1‑100 (MQ=255)
                                           aTCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGAATTGAAAAAAGa                                                   <  2:487437/100‑1 (MQ=255)
                                             cTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGaaa                                                 <  1:1860060/100‑1 (MQ=255)
                                              tttCGTGGTGACGTTTTCAGGTGTGACTAACTGTTCAGACTTATGCTATTACGACTTCGTTATTACACGTTATGTCCCCTGGAGGGTTAAAAAAAGAAAc                                                <  2:1186480/100‑1 (MQ=255)
                                               ttCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACg                                               >  2:835761/1‑100 (MQ=255)
                                                   tggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccc                                           >  1:826329/1‑100 (MQ=255)
                                                     gtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCgg                                         >  1:2217067/1‑100 (MQ=255)
                                                       gACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTg                                       >  2:1954955/1‑100 (MQ=255)
                                                       gACGTTTTCAGGTGTAACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTg                                       <  1:2513695/100‑1 (MQ=255)
                                                            tttCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCgg                                  >  2:1345901/1‑100 (MQ=255)
                                                            tttCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCgg                                  >  2:2145138/1‑100 (MQ=255)
                                                                aGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgc                              <  2:1534847/100‑1 (MQ=255)
                                                                aGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgc                              <  2:107316/100‑1 (MQ=255)
                                                                 ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                             >  1:1764205/1‑100 (MQ=255)
                                                                 ggTGTGACTAATTGTTCAGACATACGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                             <  1:2112943/100‑1 (MQ=255)
                                                                   tgtgACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCg                           <  1:2827888/100‑1 (MQ=255)
                                                                   tgtgACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCg                           <  1:1948960/100‑1 (MQ=255)
                                                                     tgACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTc                         <  1:928829/100‑1 (MQ=255)
                                                                      tgactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                        <  1:654759/92‑1 (MQ=255)
                                                                      tgactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                        <  1:548457/92‑1 (MQ=255)
                                                                      gACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                        >  2:965037/1‑100 (MQ=255)
                                                                      gACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                        >  1:770673/1‑100 (MQ=255)
                                                                      gACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                        >  1:1180765/1‑100 (MQ=255)
                                                                       gactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCg                       <  1:3017826/93‑1 (MQ=255)
                                                                        actggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGGTATGGCCCCTGGATGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgg                      <  1:2577201/94‑1 (MQ=255)
                                                                         ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                     <  1:1158011/95‑1 (MQ=255)
                                                                         ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                     <  1:2787018/95‑1 (MQ=255)
                                                                          tggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                    <  1:590694/96‑1 (MQ=255)
                                                                          tggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                    <  1:2552989/96‑1 (MQ=255)
                                                                           ggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggggg                   <  1:2308703/97‑1 (MQ=255)
                                                                            ttGTTCAGACATATGCTGTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                  <  1:576172/100‑1 (MQ=255)
                                                                            gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                  <  1:2951098/98‑1 (MQ=255)
                                                                             agTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcg                 <  1:1217056/99‑1 (MQ=255)
                                                                              gTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                <  1:1222485/100‑1 (MQ=255)
                                                                              gTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                <  1:820972/100‑1 (MQ=255)
                                                                               ttCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCt               <  1:1534531/100‑1 (MQ=255)
                                                                                tCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTg              <  1:881924/100‑1 (MQ=255)
                                                                                 cagacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc             <  1:412671/92‑1 (MQ=255)
                                                                                 cagacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc             <  1:451642/92‑1 (MQ=255)
                                                                                 cagacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc             <  1:1083884/92‑1 (MQ=255)
                                                                                 cAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc             >  1:1986317/1‑100 (MQ=255)
                                                                                 cAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGCTGAAAAAAGAAAAGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc             >  1:2719731/1‑100 (MQ=255)
                                                                                  agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa            <  1:1123783/93‑1 (MQ=255)
                                                                                  agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa            <  1:2207361/93‑1 (MQ=255)
                                                                                  agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa            <  1:403369/93‑1 (MQ=255)
                                                                                  aGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa            >  1:102329/1‑100 (MQ=255)
                                                                                   gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa            >  1:1344265/1‑99 (MQ=255)
                                                                                   gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt           >  2:3020495/1‑100 (MQ=255)
                                                                                    acgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAtt          <  1:661927/95‑1 (MQ=255)
                                                                                    acgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAtt          <  1:1860088/95‑1 (MQ=255)
                                                                                     cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg         <  1:273419/96‑1 (MQ=255)
                                                                                     cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg         <  1:868592/96‑1 (MQ=255)
                                                                                      gtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt        <  1:2112253/97‑1 (MQ=255)
                                                                                      atatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt        >  2:1932244/1‑100 (MQ=255)
                                                                                       tgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa       <  1:761249/98‑1 (MQ=255)
                                                                                       tatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAGAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa       >  1:1665735/1‑100 (MQ=255)
                                                                                       tatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa       >  2:1832015/1‑100 (MQ=255)
                                                                                       tatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa       <  2:1764186/100‑1 (MQ=255)
                                                                                        gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc      <  1:2976098/99‑1 (MQ=255)
                                                                                        atGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc      <  1:138990/100‑1 (MQ=255)
                                                                                         tGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACa     <  1:1559642/100‑1 (MQ=255)
                                                                                          gCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaa    <  2:238913/100‑1 (MQ=255)
                                                                                           cTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaaa   >  2:1713544/1‑100 (MQ=255)
                                                                                           cTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaaa   >  2:879983/1‑100 (MQ=255)
                                                                                            tATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAAt  >  2:2191399/1‑100 (MQ=255)
                                                                                             |                                                                                                  
CCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAAT  >  NC_000913/2644196‑2644387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑