Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,477,878 | 0 | T | A | 21.6% | 251.8 / 72.2 | 125 | intergenic (+20/+29) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
Reads supporting (aligned to +/- strand): ref base T (51/47); new base A (12/15); total (63/62) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.21e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.89e-01 |
Only 100 of 128 total aligned reads displayed.
TGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGAT > NC_000913/3477779‑3477977 | tgctgACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAt > 2:312181/1‑100 (MQ=255) gACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTccc < 2:222766/100‑1 (MQ=255) ccGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCg > 1:2321231/1‑100 (MQ=255) ccGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGAGTAAAAAAAGCGGGGAATCCCCg < 2:348169/100‑1 (MQ=255) cGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGc > 2:535051/1‑100 (MQ=255) agaAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tt < 1:1812651/100‑1 (MQ=255) aaGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttt < 1:1040342/100‑1 (MQ=255) aaGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttt < 1:2963669/100‑1 (MQ=255) aGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttt < 2:1721335/99‑1 (MQ=255) gTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttttt > 1:1104928/1‑100 (MQ=255) gTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttttt > 2:553762/1‑100 (MQ=255) gTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttt < 1:837949/100‑1 (MQ=255) gTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttt < 2:1878452/100‑1 (MQ=255) atctaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttttt < 2:1731987/96‑1 (MQ=255) tAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGt > 2:1322717/1‑100 (MQ=255) aaaaGCCAGCGAGCCGTCGAACAGCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑ttttttt < 2:2673552/98‑2 (MQ=255) aaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTc < 2:1745479/100‑1 (MQ=255) aaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTc > 2:2879195/1‑100 (MQ=255) aaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttttac < 1:2679826/100‑4 (MQ=255) aaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttttac < 1:181989/100‑4 (MQ=255) aaaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑ttttttta < 2:522122/99‑3 (MQ=255) aaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑ttttttagat > 1:1732006/1‑96 (MQ=255) aaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCa > 2:728338/1‑100 (MQ=255) aaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttttacg < 1:1078973/100‑5 (MQ=255) aaaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑tttttttacg < 2:1676824/100‑5 (MQ=255) aaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGCAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCAc < 1:884074/100‑1 (MQ=255) aaGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCAc > 2:526544/1‑100 (MQ=255) agccagccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACt > 1:2655876/1‑100 (MQ=255) agccagccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACt > 2:1209418/1‑100 (MQ=255) gccagccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACTCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACtt > 1:1247209/1‑100 (MQ=255) gccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTc < 1:1418171/100‑1 (MQ=255) ccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCg < 1:372239/100‑1 (MQ=255) cagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCgg > 2:2120378/1‑100 (MQ=255) cagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCgg < 2:2155296/100‑1 (MQ=255) cagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCgg < 1:2540794/100‑1 (MQ=255) agccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGt < 1:337965/100‑1 (MQ=255) agccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGt > 1:2470725/1‑100 (MQ=255) agccGCCGAACATCGCGTCGCAGACTGAAGAAGCGCCACCGCCACATTATTGAGGCGTAAAAAAGGCGGGGATTCCCCGC‑TTTTTTGTCGCTTTTTCgg < 2:878935/99‑1 (MQ=255) gccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTa < 2:2321208/100‑1 (MQ=255) ccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTAt > 2:1452567/1‑100 (MQ=255) cggcGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTAtt < 1:684172/97‑1 (MQ=255) gTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTa > 1:1258738/1‑100 (MQ=255) cGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAg < 2:1247198/99‑1 (MQ=255) aaCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTgg < 2:2060253/100‑1 (MQ=255) aaCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTgg < 2:154358/100‑1 (MQ=255) cATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgca > 2:306876/1‑100 (MQ=255) tCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaac < 1:720076/100‑1 (MQ=255) tCGCGTCGCAGGCTAAAGAAACGCCTCCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTGGTCACTTTTTCAGTATTAGTGgcaac < 2:2600439/100‑1 (MQ=255) cgcgTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaacc < 1:863444/100‑1 (MQ=255) cgcgTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaacc > 1:29144/1‑100 (MQ=255) cgTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTCGTCACTTTTTCGGTATTAGTGgcaaccgc < 1:1749336/100‑1 (MQ=255) tCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaa < 2:958267/100‑1 (MQ=255) cGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaac > 1:2704145/1‑100 (MQ=255) gCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc < 1:2549350/100‑1 (MQ=255) cAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:2071322/1‑100 (MQ=255) gCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgccg > 2:397932/1‑100 (MQ=255) gaagaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTg > 2:902259/1‑100 (MQ=255) gaagaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTg > 1:2799962/1‑100 (MQ=255) aaatgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCtt < 1:1242486/96‑1 (MQ=255) aaaCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCtt > 1:2392155/1‑100 (MQ=255) aaCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCttt > 1:884030/1‑100 (MQ=255) aCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTa < 2:1258727/100‑1 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTAc > 2:2514185/1‑100 (MQ=255) gccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTAcc < 2:1063470/100‑1 (MQ=255) ccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCg < 2:3014155/100‑1 (MQ=255) ccaccgccacATTATTGAGGCGTAAAAAAAGCGGGCATCCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCg < 1:1341876/100‑1 (MQ=255) caccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGc > 2:2924656/1‑100 (MQ=255) caccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGc > 2:715396/1‑100 (MQ=255) ccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCca < 1:315182/100‑1 (MQ=255) cgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCcac < 1:1669641/100‑1 (MQ=255) gccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCcaca < 1:57763/100‑1 (MQ=255) ccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCAcag < 1:1557373/100‑1 (MQ=255) caTTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCAcagcag < 2:1326387/100‑1 (MQ=255) ttattGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGcc < 1:346521/100‑1 (MQ=255) tattGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCt > 2:1398893/1‑100 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAAACGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGc > 2:162295/1‑100 (MQ=255) tgacaaaaaaGCGGGGAATCCCCGCTTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCAc > 1:2675850/5‑100 (MQ=38) tgacaaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCAcc > 2:2304535/5‑100 (MQ=255) gacaaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCg > 2:834082/4‑100 (MQ=255) gTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCg > 1:914083/1‑100 (MQ=255) tAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgt > 2:664420/1‑100 (MQ=255) naaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTTGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtg > 2:658508/2‑100 (MQ=255) naaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtg > 2:2026164/2‑100 (MQ=255) caaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtg > 1:712065/2‑100 (MQ=255) caaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtg > 1:1222988/2‑100 (MQ=255) caaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCATTTACTGCCACAGCAGCCTTCGCCACCgtg > 2:1831133/2‑100 (MQ=39) aaaaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtg > 2:1813801/1‑100 (MQ=255) aaaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCgtgt < 1:118131/100‑1 (MQ=255) aaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGtt < 1:470654/100‑1 (MQ=255) aaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGtt > 2:653631/1‑100 (MQ=255) aaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGtt > 1:2286961/1‑100 (MQ=255) aaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCTTTTCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTc > 2:253778/1‑100 (MQ=255) aaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTc > 1:491959/1‑100 (MQ=255) aaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCa < 2:2799935/100‑1 (MQ=255) gCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGa > 2:166883/1‑100 (MQ=255) gCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGa > 1:1817869/1‑100 (MQ=255) ggggATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCTTGTTCATGAcc > 1:1328265/1‑100 (MQ=255) gggATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCg > 2:1502219/1‑100 (MQ=255) gggATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCg > 2:1502319/1‑100 (MQ=255) ttCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTAACGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGAt < 1:2981943/100‑1 (MQ=255) | TGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGAT > NC_000913/3477779‑3477977 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |