Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,286,046 C→G N557K (AAC→AAG yejM → essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,286,0460CG99.3% 538.9 / NA 149N557K (AAC→AAGyejMessential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (86/62);  total (86/63)
Fisher's exact test for biased strand distribution p-value = 4.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 149 total aligned reads displayed.

TTACTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAACTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAA  >  NC_000913/2285950‑2286140
                                                                                                |                                                                                              
ttACTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTa                                                                                             <  1:532681/100‑1 (MQ=255)
  aCTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACg                                                                                           <  1:506133/100‑1 (MQ=255)
   cTGGGTTACCGCAGCGGATAACGATACGCTGGCAAGTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACgt                                                                                          >  2:1026930/1‑100 (MQ=255)
    tGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACgtg                                                                                         >  2:406756/1‑100 (MQ=255)
    tGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACgtg                                                                                         <  2:2783087/100‑1 (MQ=255)
       gTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACgtgg                                                                                        <  2:2308976/98‑1 (MQ=255)
          aacGCAGCGGATAACGATACTCTGGCAAAAAAAAAAAAAAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACgtggtg                                                                                      <  2:1053010/95‑1 (MQ=255)
          aCCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGGGgtgaaa                                                                                   >  1:308193/1‑100 (MQ=255)
           ccGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaag                                                                                  >  2:2207516/1‑100 (MQ=255)
           ccGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGGAAATACCGCACTTACAAGTTACGTGgtgaaag                                                                                  <  2:767193/100‑1 (MQ=255)
             gCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagag                                                                                >  1:1739151/1‑100 (MQ=255)
             gCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagag                                                                                >  2:1485389/1‑100 (MQ=255)
                gatcttAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagagtgt                                                                             <  2:958212/95‑2 (MQ=255)
                gCGGATAACGATACGCTGGCAATTACCACCCCGTAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgagaaagagtga                                                                             >  2:2027220/1‑100 (MQ=255)
                  ggATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagagtgaaa                                                                           <  1:1518181/100‑1 (MQ=255)
                  ggATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagagtgaaa                                                                           >  2:1018789/1‑100 (MQ=255)
                   gATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagagtgaaag                                                                          <  2:1415323/100‑1 (MQ=255)
                    aTAACCATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGgtgaaagagtga                                                                             <  2:2799461/96‑1 (MQ=255)
                     tAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGAt                                                                        <  1:688905/100‑1 (MQ=255)
                         gATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGaaa                                                                    >  1:291408/1‑100 (MQ=255)
                          aTACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGaaaa                                                                   <  1:798063/100‑1 (MQ=255)
                            aCGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTTAACAATAACGGTAAATACCTCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAAc                                                                 <  2:1682071/100‑1 (MQ=255)
                            aCGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAAc                                                                 <  1:1883967/100‑1 (MQ=255)
                             cGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAAcc                                                                >  2:1308807/1‑100 (MQ=255)
                             cGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAAcc                                                                >  1:2337837/1‑100 (MQ=255)
                             cGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAAcc                                                                >  1:1784240/1‑100 (MQ=255)
                              gCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACca                                                               >  2:60178/1‑100 (MQ=255)
                               cTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACcac                                                              >  1:1771175/1‑100 (MQ=255)
                                 ggCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAg                                                            >  1:1662946/1‑100 (MQ=255)
                                  gCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGt                                                           >  1:201624/1‑100 (MQ=255)
                                  gCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGt                                                           <  1:2548135/100‑1 (MQ=255)
                                      ttACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAg                                                       <  1:1416106/100‑1 (MQ=255)
                                       tACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGt                                                      >  1:1037422/1‑100 (MQ=255)
                                       tACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGt                                                      >  1:2648547/1‑100 (MQ=255)
                                        accaccCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGtt                                                     >  1:2628859/1‑100 (MQ=255)
                                         ccaccCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGttt                                                    >  2:851393/1‑100 (MQ=255)
                                          caccCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTg                                                   <  2:2857437/100‑1 (MQ=255)
                                          caccCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTg                                                   >  2:1862007/1‑100 (MQ=255)
                                           accCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTgn                                                  <  1:1940598/100‑2 (MQ=255)
                                             cccGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTa                                                >  1:2494702/1‑100 (MQ=255)
                                              ccaaaaaaaACGCAGAAACAGAACAATAACGATAAATACCGCAGTGACAACTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGtt                                                 <  1:1336844/95‑1 (MQ=255)
                                              ccGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTAt                                               >  1:440846/1‑100 (MQ=255)
                                              ccGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTAt                                               >  1:491148/1‑100 (MQ=255)
                                              ccGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTAt                                               >  1:2420814/1‑100 (MQ=255)
                                              ccGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTAt                                               >  1:1989438/1‑100 (MQ=255)
                                                gAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTg                                             >  1:1830168/1‑100 (MQ=255)
                                                 aaaaaGACGCTGGTACTGAACAATAACGGTAAAAACCGAACTTACAAGTTACGTGGTGAAAGAAAAAAAAAAAAAAAACCACAGTTAAGTTTGTTATTGc                                            <  2:240553/100‑1 (MQ=255)
                                                  aaaaGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTACGTTTGTTATTGCa                                           >  2:2595603/1‑100 (MQ=255)
                                                  aaaaGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCa                                           <  2:1753644/100‑1 (MQ=255)
                                                  aaaaGACGCTAGTACTGAACAATAACGGTAAATACCGAATTTACAAGTTACGTGGTTAAAGAATAAAAAAAAAAAAACCACAGTTAAGTTTGTTATTGc                                            <  2:1160399/99‑1 (MQ=255)
                                                     aGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGt                                        >  2:1531810/1‑100 (MQ=255)
                                                      gACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTg                                       >  2:2464659/1‑100 (MQ=255)
                                                      gACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTg                                       <  2:1300312/100‑1 (MQ=255)
                                                       aCGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGc                                      <  1:1255247/100‑1 (MQ=255)
                                                           tGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGAc                                  <  2:2634944/100‑1 (MQ=255)
                                                           tGGTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGAc                                  <  1:663004/100‑1 (MQ=255)
                                                           tGGTACTGAACAATAACGGTAAATACCACACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGAc                                  <  1:3043483/100‑1 (MQ=255)
                                                            ggTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACa                                 >  1:249566/1‑100 (MQ=255)
                                                            ggTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACa                                 >  2:2665454/1‑100 (MQ=255)
                                                            ggTACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAATAAAAAAAAAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGAc                                  <  2:431101/99‑1 (MQ=255)
                                                              tACTGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGa                               >  2:259041/1‑100 (MQ=255)
                                                                 tGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACga                            <  2:523321/100‑1 (MQ=255)
                                                                 tGAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACga                            >  1:2600307/1‑100 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAATCCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACg                             <  2:1644120/98‑1 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           >  1:2955189/1‑100 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           <  2:1771156/100‑1 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           >  1:534089/1‑100 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           <  1:2344104/100‑1 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           >  1:1280552/1‑100 (MQ=255)
                                                                  gAACAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgag                           >  1:933965/1‑100 (MQ=255)
                                                                   aaCAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgaga                          >  2:812783/1‑100 (MQ=255)
                                                                   aaCAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACgaga                          <  2:3084681/100‑1 (MQ=255)
                                                                    aCAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGaa                         >  1:1554097/1‑100 (MQ=255)
                                                                     cAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAg                        <  2:1073362/100‑1 (MQ=255)
                                                                     cAATAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAg                        <  1:2382301/100‑1 (MQ=255)
                                                                      aaTAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGTAAAACCACAGTTAAGATTGTTATTGCAAGTGCTGACAGACGAGAAGc                       >  2:2082779/1‑100 (MQ=255)
                                                                      aaTAACGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGc                       <  1:225810/100‑1 (MQ=255)
                                                                          aCGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGttt                   >  1:838047/1‑100 (MQ=255)
                                                                           cGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGtttt                  <  1:747769/100‑1 (MQ=255)
                                                                           cGGTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGtttt                  <  1:1816253/100‑1 (MQ=255)
                                                                            ggTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTa                 >  1:1446236/1‑100 (MQ=255)
                                                                            ggTAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTa                 >  1:2140157/1‑100 (MQ=255)
                                                                              tAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATc               <  2:530426/100‑1 (MQ=255)
                                                                              tAAATACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATc               <  2:3029979/100‑1 (MQ=255)
                                                                               atctACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCg              <  2:139725/97‑1 (MQ=255)
                                                                                 aTACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCt            >  1:2068369/1‑100 (MQ=255)
                                                                                  tACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTa           <  2:2493087/100‑1 (MQ=255)
                                                                                  tACCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTa           >  2:2104126/1‑100 (MQ=255)
                                                                                   aCCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCgagat          >  1:139725/1‑96 (MQ=255)
                                                                                   aCCGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTaa          >  1:118272/1‑100 (MQ=255)
                                                                                    ccGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAAc         >  2:479440/1‑100 (MQ=255)
                                                                                    ccGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAAc         >  1:1123907/1‑100 (MQ=255)
                                                                                    ccGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAAc         >  2:2961192/1‑100 (MQ=255)
                                                                                     cGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACt        >  2:2390420/1‑100 (MQ=255)
                                                                                     cGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACt        <  1:902522/100‑1 (MQ=255)
                                                                                     cGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACt        >  1:354725/1‑100 (MQ=255)
                                                                                     cGCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACt        >  1:2059284/1‑100 (MQ=255)
                                                                                      gCACTTACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTg       <  2:2007118/100‑1 (MQ=255)
                                                                                          ttACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGatt  <  2:1830148/100‑2 (MQ=255)
                                                                                           tACAAGTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGattaa  >  2:1190443/1‑100 (MQ=255)
                                                                                                |                                                                                              
TTACTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAACTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGATTAA  >  NC_000913/2285950‑2286140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: