Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,516,689 T→C T382A (ACG→GCG)  yfeA ← putative diguanylate cyclase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,516,6890TC100.0% 438.5 / NA 124T382A (ACG→GCG) yfeAputative diguanylate cyclase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (57/67);  total (57/67)

Only 100 of 125 total aligned reads displayed.

GTCGCCCTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGTACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAACTCTT  >  NC_000913/2516593‑2516785
                                                                                                |                                                                                                
gTCGCCCTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATCGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACg                                                                                               >  2:1977973/1‑100 (MQ=255)
  cGCCCTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTTCATCAACGGCAGCAGCGCACGGc                                                                                             >  2:2842623/1‑100 (MQ=255)
    cccTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCaa                                                                                           >  1:1448440/1‑100 (MQ=255)
     ccTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCaaa                                                                                          <  2:2714671/100‑1 (MQ=255)
     ccTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCaaa                                                                                          >  2:1306952/1‑100 (MQ=255)
      cTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAAt                                                                                         <  2:1089703/100‑1 (MQ=255)
        tCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTg                                                                                       <  2:185879/100‑1 (MQ=255)
        tCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTg                                                                                       >  2:56834/1‑100 (MQ=255)
         ccGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCACCGGCAGCAGCGCACGGCAAATTGa                                                                                      >  2:2634654/1‑100 (MQ=255)
          cGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAg                                                                                     <  1:2851436/100‑1 (MQ=255)
           gTTTCCGGCCCGCTCAGCACTAACAGCAGTTCCCTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGc                                                                                    >  1:2928213/1‑100 (MQ=255)
           gTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGc                                                                                    <  2:593135/100‑1 (MQ=255)
           gTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGc                                                                                    >  1:2472569/1‑100 (MQ=255)
            tttCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCg                                                                                   <  1:56834/100‑1 (MQ=255)
              tCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGa                                                                                 >  2:1492398/1‑100 (MQ=255)
               ccGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGAt                                                                                <  1:531694/100‑1 (MQ=255)
               ccGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAAGTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGAt                                                                                <  2:3075091/100‑1 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  1:817941/1‑100 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  1:840233/1‑100 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  1:311644/1‑100 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  1:2475255/1‑100 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  2:107355/1‑100 (MQ=255)
                 ggCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATAc                                                                              >  2:1090395/1‑100 (MQ=255)
                   cccGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAg                                                                            >  1:1365270/1‑100 (MQ=255)
                    ccGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGt                                                                           <  1:1585797/100‑1 (MQ=255)
                    ccGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGt                                                                           <  2:710988/100‑1 (MQ=255)
                     cGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTg                                                                          <  1:971501/100‑1 (MQ=255)
                     cGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTg                                                                          <  2:2151611/100‑1 (MQ=255)
                         cAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAAcg                                                                      <  1:989684/100‑1 (MQ=255)
                         cAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAAcg                                                                      <  2:2179302/100‑1 (MQ=255)
                         cAGCACTAACAGCAGTCCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAAcg                                                                      >  1:2338279/1‑100 (MQ=255)
                           gCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAAcgcg                                                                    >  1:891349/1‑100 (MQ=255)
                             agtAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGca                                                                  <  2:1872131/98‑1 (MQ=255)
                             aCTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGca                                                                  <  1:2634678/100‑1 (MQ=255)
                              cTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcat                                                                 >  1:355714/1‑100 (MQ=255)
                              cTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcat                                                                 >  2:357811/1‑100 (MQ=255)
                               tAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcatc                                                                >  1:1221462/1‑100 (MQ=255)
                               tAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcatc                                                                <  2:2045772/100‑1 (MQ=255)
                               tAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcatc                                                                <  1:2806104/100‑1 (MQ=255)
                                aaCAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGcatca                                                               >  2:2806077/1‑100 (MQ=255)
                                  cagcagTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCAtt                                                             >  2:2935148/1‑100 (MQ=255)
                                  cagcagTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCAtt                                                             >  1:999283/1‑100 (MQ=255)
                                     cagTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAg                                                          <  1:2620328/100‑1 (MQ=255)
                                      agTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGc                                                         <  2:748093/100‑1 (MQ=255)
                                      agTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGc                                                         <  2:2706813/100‑1 (MQ=255)
                                       gTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGcc                                                        >  2:2849698/1‑100 (MQ=255)
                                       gTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGcc                                                        <  2:1956166/100‑1 (MQ=255)
                                          cACTACCCGGCAATTGATACAACTTTTCTTTTTTTTGCATCAACGGCAGCAGCGCACGGCAAATTTAGCGGATACAGTGAACGCGCATCATTAAGCCGTa                                                     >  2:2972405/1‑100 (MQ=255)
                                          cACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTa                                                     >  1:58088/1‑100 (MQ=255)
                                          cACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTa                                                     >  2:242172/1‑100 (MQ=255)
                                          cACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTa                                                     >  1:1776362/1‑100 (MQ=255)
                                           aCTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTaa                                                    <  1:2511487/100‑1 (MQ=255)
                                           aCTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTaa                                                    <  1:940062/100‑1 (MQ=255)
                                           aCTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTaa                                                    >  1:1822008/1‑100 (MQ=255)
                                               cccGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgac                                                >  1:2793734/1‑100 (MQ=255)
                                               cccGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgac                                                <  1:1532584/100‑1 (MQ=255)
                                               cccGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgac                                                >  2:681772/1‑100 (MQ=255)
                                                ccGGCAATTGATACAACTTTGCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgacg                                               <  2:1430107/100‑1 (MQ=255)
                                                 cGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgacga                                              <  1:1645862/100‑1 (MQ=255)
                                                  ggCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATgacgac                                             <  2:1233466/100‑1 (MQ=255)
                                                    cAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTc                                           <  2:1814151/100‑1 (MQ=255)
                                                     aaTTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCa                                          >  2:2943028/1‑100 (MQ=255)
                                                       ttGATACAACTTTTCGTTTTCCTGCATCAACGGAAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGAGCATCATTAAGCCGTAATGACGACTCATa                                        >  2:1860764/1‑100 (MQ=255)
                                                        tGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCTATTTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATaa                                       <  2:1233980/100‑1 (MQ=255)
                                                        tGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGCGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATaa                                       >  2:391431/1‑100 (MQ=255)
                                                         gATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATaaa                                      >  1:2894184/1‑100 (MQ=255)
                                                          aTACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAAc                                     <  1:1089707/100‑1 (MQ=255)
                                                          aTACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAAc                                     <  1:2976946/100‑1 (MQ=255)
                                                           tACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACt                                    >  1:2684585/1‑100 (MQ=255)
                                                           tACAACTTTTCGATTTCCTCAATCAAAGGCAGGAGCGCACGCCAAATTGAGCGGATACAGTAAACGCGTATCATTAAGCCGTAATGACGACTCATAAACt                                    <  2:2617101/100‑1 (MQ=255)
                                                            aCAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTc                                   >  2:1357500/1‑100 (MQ=255)
                                                             cAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCa                                  >  2:2043700/1‑100 (MQ=255)
                                                             cAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCa                                  >  2:577989/1‑100 (MQ=255)
                                                               aCTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAg                                <  1:1977995/100‑1 (MQ=255)
                                                               aCTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAg                                <  1:2643800/100‑1 (MQ=255)
                                                                cTTTTCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGa                               <  1:1094371/100‑1 (MQ=255)
                                                                 ttttCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGAt                              <  2:1357390/100‑1 (MQ=255)
                                                                 ttttCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGAt                              >  1:42042/1‑100 (MQ=255)
                                                                  tttCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGAtt                             >  2:1983044/1‑100 (MQ=255)
                                                                    tCGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTAt                           <  2:2854623/100‑1 (MQ=255)
                                                                     cGTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATc                          >  1:2563259/1‑100 (MQ=255)
                                                                      gTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCa                         <  2:817936/100‑1 (MQ=255)
                                                                      gTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCa                         >  1:1456018/1‑100 (MQ=255)
                                                                      gTTTTCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCa                         >  1:2294303/1‑100 (MQ=255)
                                                                        tttCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAAt                       <  1:1061949/100‑1 (MQ=255)
                                                                         ttCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGCCGACTCATAAACTCGAGATTATCAATg                      <  1:2291839/100‑1 (MQ=255)
                                                                         ttCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATg                      <  1:2779410/100‑1 (MQ=255)
                                                                         ttCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATg                      <  2:311642/100‑1 (MQ=255)
                                                                          tCCTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATgc                     >  2:2609570/1‑100 (MQ=255)
                                                                            cTGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATgcgc                   >  2:1557880/1‑100 (MQ=255)
                                                                             tGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCgca                  >  1:2784765/1‑100 (MQ=255)
                                                                             tGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCgca                  <  2:1589032/100‑1 (MQ=255)
                                                                             tGCATCAACGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCgca                  <  2:2800015/100‑1 (MQ=255)
                                                                                agcAACGGCAGCAGCGCACGGCTAATTGAGCGGATACAGTGACCGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCgcaggc               <  2:2451389/98‑1 (MQ=255)
                                                                                    aCGGCAGCAGCGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGgcagca           <  2:1474926/100‑1 (MQ=255)
                                                                                         agcagcGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAAc      <  1:357813/100‑1 (MQ=255)
                                                                                            agcGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAActct   <  2:58088/100‑1 (MQ=255)
                                                                                            agcGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAActct   <  1:582108/100‑1 (MQ=255)
                                                                                            agcGCACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAActct   <  2:2472546/100‑1 (MQ=255)
                                                                                             gcgcACGGCAAATTGAGCGGCTACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAACTCtt  >  2:1883048/1‑100 (MQ=255)
                                                                                                |                                                                                                
GTCGCCCTTCCGTTTCCGGCCCGCTCAGCACTAACAGCAGTTCACTACCCGGCAATTGATACAACTTTTCGTTTTCCTGCATCAACGGCAGCAGCGTACGGCAAATTGAGCGGATACAGTGAACGCGCATCATTAAGCCGTAATGACGACTCATAAACTCAAGATTATCAATGCGCAGGCAGCAAAAACTCTT  >  NC_000913/2516593‑2516785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: