| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,648,144 | (T)7→6 | 100% | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,138 | 0 | T | . | 95.4% | 686.0 / 21.7 | 172 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (1/6); new base . (88/76); total (89/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.59e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 192 total aligned reads displayed.
AGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTC > NC_000913/3648040‑3648228 | aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtt < 2:4042948/100‑1 (MQ=255) tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt < 2:2741510/100‑1 (MQ=255) tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt < 2:2295930/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:3841054/100‑1 (MQ=255) aggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt > 1:3250983/2‑100 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 2:3475583/100‑2 (MQ=255) gTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:1857536/1‑99 (MQ=255) aTTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttacat > 1:240965/1‑96 (MQ=255) tAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATcc < 1:2710550/100‑1 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 2:460273/1‑100 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 2:4192027/1‑100 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGATGGAAAGTAACAAACCGACGCAAAGTC‑GCTTTTTTACATCCg < 2:2978943/100‑1 (MQ=21) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 1:341460/1‑99 (MQ=255) ttGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAtt < 2:1386965/100‑1 (MQ=255) ttGATGCGTTAGATGATCACTATCTTAGTCCAGCCAGAACCACCAACTCATGGTTGTAAGGTAAAAATCCGACACAAAGTGGGTTTTTTTAcg < 1:3517921/93‑2 (MQ=255) aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 1:3156551/100‑1 (MQ=255) aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 2:301722/100‑1 (MQ=255) gCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGAc < 2:2197700/100‑1 (MQ=255) gCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGAc < 2:1683067/100‑1 (MQ=255) cGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACCTCCGGGTTCGGa > 1:3908841/1‑98 (MQ=18) cGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACa > 1:1174518/1‑100 (MQ=255) cGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACa > 2:3172217/1‑100 (MQ=255) cGTGAGATGATGGCTATCTCACTCCACTCAGAGCCACCAACTCAGTGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGAc < 1:4074767/99‑1 (MQ=18) ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 1:3664313/100‑1 (MQ=255) tAGATGTTGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 1:2169659/100‑1 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 2:1781762/100‑1 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 1:3765111/100‑1 (MQ=255) gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt > 2:1576839/1‑100 (MQ=255) gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt < 1:1334406/100‑1 (MQ=255) gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTAGG‑TTTTTTACATCCGGATTCGGAAAAAGCTTa > 2:750321/1‑99 (MQ=18) tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata < 2:374154/100‑1 (MQ=255) tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata < 1:2371455/100‑1 (MQ=255) tgGCAATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAATACCGACGCAAACTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:640905/99‑1 (MQ=18) gCTATCGCACGGCAGTCAGAGCCACCAACTCAGGGTTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAatat < 1:926787/99‑1 (MQ=18) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa < 1:753393/100‑1 (MQ=255) aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAANTC‑GNTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg < 2:565764/100‑1 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGGTTCGGACAACGCTTAATATGACg > 2:812646/1‑99 (MQ=18) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa > 2:3539036/1‑100 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa < 2:2828783/100‑1 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa < 1:3627239/100‑1 (MQ=255) ctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt > 2:3413602/1‑100 (MQ=255) tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 2:2371105/1‑100 (MQ=255) cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 2:2534180/1‑99 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGTGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc < 1:1397503/100‑1 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 1:1496870/1‑100 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 1:3196716/1‑100 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 2:152126/1‑100 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGGCCCa > 2:3334123/1‑100 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCa > 2:1624515/1‑100 (MQ=255) cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg > 2:4275108/1‑100 (MQ=255) cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg < 1:844978/100‑1 (MQ=255) aGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt > 2:3959656/1‑100 (MQ=255) aGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt > 2:270708/1‑100 (MQ=255) gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGGCCCAGTg < 2:2309010/100‑1 (MQ=255) cAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATTTGACGATGACCCAGTGaa > 2:3375763/1‑100 (MQ=255) cAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAAGATGACCCAGTGaa > 2:2252282/1‑100 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 1:375933/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1963665/100‑1 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 1:4291187/100‑1 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:500971/100‑1 (MQ=255) caACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa > 2:3296538/1‑100 (MQ=255) aaCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACAGCCGGAATCGGCCAAACCTTAAAAAGAAGATGAACGAGAGAGAGTATACaa > 1:1786146/1‑99 (MQ=9) cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAGGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc < 2:2207287/100‑1 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc > 1:3407314/1‑100 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACACAGTGAAAGTATATAAATc > 1:2916324/1‑100 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 2:3268859/1‑100 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 2:113760/1‑100 (MQ=255) gggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa > 2:3885374/1‑100 (MQ=255) gggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACAGCCGGAGTGGAACAAGGCTTAATATGGCGAAGCCTCAGGAAAAGTATATAAATCGACa > 1:3294855/1‑100 (MQ=16) ggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCAc < 1:460272/100‑1 (MQ=255) gCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt < 1:2825074/100‑1 (MQ=255) ggAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 2:2336832/1‑100 (MQ=255) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCTGGAAACGGAGAAGGCTTAATATGAAGTTGACCTATGGGTAGTTTATAAATGGTGACGGCGat > 1:2140574/1‑100 (MQ=12) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat > 1:3420960/1‑100 (MQ=255) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:3539011/100‑1 (MQ=255) ttccgatctaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 1:1018818/91‑1 (MQ=255) aaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATTCGTAATCCGAAAAGGCTTAATATGACGATGACCCAGTAAAAGTATATAAATTGTCACTCCGat > 1:600076/1‑99 (MQ=25) aaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 2:1526499/100‑1 (MQ=255) aaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 2:3737591/100‑1 (MQ=255) aaGTAAAAAACCGACGCAAAGTC‑GTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 1:4210297/100‑1 (MQ=255) tAAAAAACCGACGCAACGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat < 2:248522/100‑1 (MQ=255) tAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 2:299131/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAACTCGTCAATGCGAtatata > 2:1908722/1‑100 (MQ=39) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 1:2277013/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:2607528/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 1:3821550/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:1055907/1‑100 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc < 2:4351419/100‑1 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 2:2921519/1‑100 (MQ=255) aaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGa > 2:129753/1‑100 (MQ=255) aCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGataagatcggaa > 2:1018820/1‑91 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:3669685/100‑1 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:3468120/100‑1 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:1481164/100‑1 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:1576833/100‑1 (MQ=255) gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 1:2545002/1‑98 (MQ=255) gACGCAAAGTCGG‑TCTCTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 1:99318/1‑98 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct < 2:3231498/100‑1 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:1100424/1‑100 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 2:4407319/100‑1 (MQ=255) | AGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTC > NC_000913/3648040‑3648228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |