| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 98.9% | 666.0 / ‑1.5 | 184 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (96/86); total (97/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 | aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTTA‑G‑c > 2:1651598/1‑100 (MQ=255)aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c < 2:3439650/100‑1 (MQ=255) tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑cc < 1:3878163/100‑1 (MQ=255) tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑cc > 1:1950316/1‑100 (MQ=255) cGGAACTTTTATTGTGCACAGAAAAGGCCAGCCGCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c < 1:3963162/98‑1 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑cccc > 1:2089688/1‑100 (MQ=255) aCCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccccct > 1:4223864/1‑98 (MQ=255) ccTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccccctg > 2:1487392/1‑97 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccccctgcg < 2:4163984/100‑6 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGtt > 2:1417414/1‑100 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGtt > 2:2665720/1‑100 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGt > 2:176450/1‑99 (MQ=255) tATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGttt < 2:2430304/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTg < 2:3297811/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTg < 1:2788353/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg < 1:2314636/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg > 2:178689/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg > 1:352569/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg < 1:3022159/100‑1 (MQ=255) gggCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg < 1:653311/98‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAgg < 2:1576477/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAgg < 2:3939974/100‑1 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGa < 1:3735269/100‑1 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGa > 1:1061316/1‑99 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAt > 1:1608718/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAtt > 1:1259766/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAttt > 1:2495975/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcg > 2:1375214/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcg > 2:1690841/1‑100 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCgcgc < 2:2540631/100‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCa < 1:4289594/100‑1 (MQ=255) gCCAGCCTCGCTTGACACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCaaa < 2:4346276/100‑1 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGgc < 2:431722/100‑1 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc > 2:2516050/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 2:3637267/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 2:2145141/1‑100 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:2113434/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATACTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:2252760/100‑1 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 2:3883782/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:816017/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGCACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc > 1:2892412/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACACCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:3103520/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 2:533318/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:1335583/100‑1 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa < 2:146328/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 2:1496363/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:1805345/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:2472265/1‑100 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt > 1:474928/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 1:918496/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCCCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 1:2515749/98‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg < 2:3429943/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:4011687/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:3185167/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:2146577/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 2:2396286/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:3758689/100‑1 (MQ=255) aCAGATGGTGACTTACTCGCGAAACAGCGCTTCGATAGTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:413918/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:448629/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:515568/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 1:3441816/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:1958216/100‑1 (MQ=255) aTGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAaca > 2:516442/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 2:1025089/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:2223387/1‑100 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa > 2:2599053/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:1539568/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 2:685227/1‑100 (MQ=255) nactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 1:324575/2‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg > 2:4255201/1‑99 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg > 2:3206858/1‑99 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:4111046/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:245087/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:1933747/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:352570/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCGACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1077178/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:2810554/99‑1 (MQ=255) gcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg > 1:4176992/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:2391929/100‑1 (MQ=255) gtaCAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc > 2:2988166/3‑100 (MQ=255) aCAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa < 2:2616576/100‑1 (MQ=255) aGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 1:731452/1‑100 (MQ=255) gcgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAGCACGTTCACGGGTGAGGCCAAttt > 2:3081929/1‑100 (MQ=255) gcgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:2673448/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc < 2:1875528/100‑1 (MQ=255) cgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 1:1815610/1‑100 (MQ=255) gcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:1003778/100‑1 (MQ=255) cTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:1316935/100‑1 (MQ=255) cTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:1144750/1‑100 (MQ=255) ttCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg < 1:3688294/100‑1 (MQ=255) tCGATATTCATC‑CCCCTGCGTTTGCAGAATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa < 1:1508899/100‑1 (MQ=255) tCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa < 1:626124/100‑1 (MQ=255) gATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGccc > 2:4094740/1‑100 (MQ=255) atatTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 1:3214355/100‑1 (MQ=255) tatTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt > 1:1378116/1‑99 (MQ=255) tatTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 1:2814587/100‑1 (MQ=255) atTCA‑GCCCCCTGCGTTTGCAGGGTTTCGCGCAAACGGCGCAGGCCTTGAACCTGAATCTGGCGAACACGTTCACGGTTGCGGCCAATTTCACGACCTAc > 1:2627784/1‑100 (MQ=255) atTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc < 2:883778/100‑1 (MQ=255) ttCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:3370756/1‑100 (MQ=255) ttCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:1198350/1‑100 (MQ=255) | ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |