| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 380,022:1 | (G)10→11 | 100% | intergenic (‑141/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,022 | 1 | . | G | 71.8% | 358.6 / 161.5 | 149 | intergenic (‑141/+47) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (25/17); new base G (55/52); total (80/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
Only 100 of 174 total aligned reads displayed.
ATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGG > NC_000913/379923‑380121 | ggtattctatatgtcaatgcatacccccctataggatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaag‑gggggg > 2:2499826‑M1/94‑100 (MQ=255) ctatatgtcaatgcatacccccctatagtatatcacaccggagaataaaatttctccggtgaatgtggtcggaaaacaaagaggaacg‑ggggggtgctaa < 1:2154683‑M1/13‑7 (MQ=255) tatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATc < 1:3060019‑M1/14‑1 (MQ=255) tatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATc < 1:1821584‑M1/14‑1 (MQ=255) atatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCg < 1:2620590‑M1/15‑1 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGG‑GGGGGG‑C‑TAATCGGCa > 2:1892633/1‑100 (MQ=255) tgtcaatggatacccgcgtatagtatataacactggagaataaaatttatccggtgaatgtggtaggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCgg < 1:3588544‑M1/16‑1 (MQ=255) tgtcaatgcatacccccctatagtctataacactggagaataaaatttatccggtgaatgtggtcggcaaacaaagaggaaaG‑GGGGGGGC‑TAATCgg < 1:4172348‑M1/16‑1 (MQ=255) tgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGc < 1:2904584‑M1/17‑1 (MQ=255) tgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCa < 2:928235‑M1/18‑1 (MQ=255) gtcattgcatccccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAg > 2:3723109‑M1/82‑99 (MQ=255) gtcaatgcatacccctctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAg > 2:4345366‑M1/82‑100 (MQ=255) catatagaatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAgg > 2:2011890‑M1/82‑100 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAACATTTTTCCGGTGAAAAAAAAAAAAAAACAAAGAGGAAA‑‑GG‑GGGGGG‑C‑TAATCGGCAgg < 1:1569930/98‑1 (MQ=255) tgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAg > 2:1504702‑M1/77‑100 (MQ=255) agaatacccccctataggatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAgg > 2:1024854‑M1/77‑100 (MQ=255) catacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGgc > 2:4118521‑M1/75‑100 (MQ=255) atacccccctatagtatataacactggagaataaaatttatccggtgaaggtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAGGgcc > 1:135591‑M1/74‑100 (MQ=255) tacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGgccg > 1:1600493‑M1/73‑100 (MQ=255) tacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGgccg < 1:751224‑M1/28‑1 (MQ=255) ctatagtatatAAAACTGGAGAATAAAATTTATCCGGTCAATGTGGTCGGAAAACAAAGAGGAAA‑GGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCgg > 1:2719123‑M2/12‑100 (MQ=255) ccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAgggaaggccagatcg < 2:1566445‑M1/33‑7 (MQ=255) ccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCgg > 1:1016391‑M1/68‑100 (MQ=255) tagtatatAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATa > 1:2072652‑M2/9‑100 (MQ=255) atagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATa > 1:1144926‑M1/64‑100 (MQ=255) atagtatataacactggagaaaaaaatttatccggggaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAAGCGGCAGGGAAGgc > 1:1699651‑M1/64‑89 (MQ=255) gtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 1:1034633‑M1/61‑100 (MQ=255) tatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgg < 2:1231238‑M1/41‑1 (MQ=255) atataacactggagaataaaatttatccggtgaatgtgggcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:1775608‑M1/59‑100 (MQ=255) tataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc > 1:293425‑M1/58‑100 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg > 1:2710734‑M1/57‑100 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg > 2:2620604‑M1/57‑100 (MQ=255) taacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg < 2:2521660‑M1/45‑1 (MQ=255) taacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAgcggg < 1:2540321‑M1/42‑1 (MQ=255) acactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 1:1236287‑M1/54‑100 (MQ=255) acactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 1:2063147‑M1/54‑100 (MQ=255) cactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGcgggcggcct > 2:4405901‑M1/53‑98 (MQ=255) cactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg < 2:799651‑M1/48‑1 (MQ=255) actggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 2:3874753‑M1/49‑1 (MQ=255) actggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:692232‑M1/49‑1 (MQ=255) gagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg > 1:968682‑M1/48‑99 (MQ=255) agaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGaa > 1:3747500‑M1/47‑100 (MQ=255) aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GA‑GGAGAA‑C‑TAATAGGCAAGGAAGGCAGCCCCGGGAAGCGGGCGGCAGAAGGAATCa > 1:1445389/1‑100 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATc > 1:1440641‑M1/46‑100 (MQ=255) aataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATc > 1:3368558‑M1/45‑100 (MQ=255) aataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATc > 2:3330522‑M1/45‑100 (MQ=255) ataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑GATAATCGGCAGGGAAGGCCTCACCGGATAGCGGGCGGCAGAAGGAATCa < 1:250421‑M1/57‑1 (MQ=255) ataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 2:2462389‑M1/44‑100 (MQ=255) taaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg < 2:846824‑M1/58‑1 (MQ=255) taaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 1:2136192‑M1/43‑100 (MQ=255) taaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg < 2:3193121‑M1/58‑1 (MQ=255) taaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg < 1:997196‑M1/58‑1 (MQ=255) atctatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 2:3157239‑M1/43‑100 (MQ=255) aaaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 1:1772253‑M1/42‑99 (MQ=255) aaatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGaa > 2:4165704‑M1/41‑100 (MQ=255) aatttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt < 2:4228926‑M1/61‑1 (MQ=255) atttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATcagagat < 1:3157221‑M1/62‑4 (MQ=255) atttatccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 2:4361130‑M1/39‑100 (MQ=255) tttatccggtgagtgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 1:3374277‑M1/38‑99 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCa > 1:3293009‑M1/35‑100 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 2:706854‑M1/35‑100 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 2:2759000‑M1/35‑100 (MQ=255) ccggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 1:561303‑M1/33‑100 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt < 1:4381083‑M1/69‑1 (MQ=255) gatgaatgtggtccgaaaacaaagaggaaaGTGGGGGG‑C‑TAAGCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc < 2:2979792‑M1/70‑1 (MQ=255) atgtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg > 2:2209290‑M1/26‑100 (MQ=255) atgtgggcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg > 1:877555‑M1/26‑100 (MQ=255) gtggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg < 2:2164310‑M1/77‑1 (MQ=255) tggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCagaatttccaggagatcggaag < 1:2470532‑M1/78‑11 (MQ=255) tggtcggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 1:4194432‑M1/23‑100 (MQ=255) ggAAAACAAAGAGGAAA‑‑AG‑GGGGGG‑C‑TAAACGGCAGGGAAGATCGCCCCGGAGAGCGGGCGGCAGAAGGAATTAGAATTTCCAGGTCAGGCGGGCTGCaa > 1:1910396/1‑100 (MQ=255) aaaaCAAAGAGGAAA‑GGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg > 2:3668173/1‑100 (MQ=255) ggaaaacaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa < 2:1397200‑M1/83‑1 (MQ=255) acaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc < 1:946849‑M1/88‑1 (MQ=255) acaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc < 1:494719‑M1/88‑1 (MQ=255) acaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 2:3453795‑M1/13‑100 (MQ=255) acaaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGACCGCCCCGGAGAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGACAGACGGGCTGCAAGTTGc < 1:1003096‑M1/88‑1 (MQ=255) caaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 2:2484210‑M1/89‑1 (MQ=255) caaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 2:2784218‑M1/89‑1 (MQ=255) caaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:1762986‑M1/12‑100 (MQ=255) caaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:741579‑M1/12‑100 (MQ=255) caaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGAaagttaca < 1:3978819‑M1/89‑4 (MQ=255) aaagaggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 2:2363757‑M1/11‑100 (MQ=255) aaagaggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 2:4308000‑M1/11‑100 (MQ=255) ggaaagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGt < 1:259938/95‑1 (MQ=255) ggaaagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcctt < 1:2764860/95‑3 (MQ=255) aggaaaG‑GGGGGGGC‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCg > 1:1120099‑M1/7‑100 (MQ=255) aggaaaG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt > 1:1861286‑M1/7‑100 (MQ=255) aaaGGGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt < 2:3976323/100‑1 (MQ=255) gaaagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAgcacgtc < 1:366566/96‑7 (MQ=255) gaaagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtc < 2:1848328/96‑2 (MQ=255) gaaagg‑gggggg‑C‑TAAGCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGtn < 1:3757773/96‑2 (MQ=255) aaaggg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtc < 2:2596794/97‑2 (MQ=255) aaagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtct < 2:3519273/97‑3 (MQ=255) aagg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaa < 1:4227132/98‑1 (MQ=255) gg‑gggggg‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaaa > 2:3929221/1‑100 (MQ=255) g‑gggggg‑C‑TAATCGGCAGGTAAGGCCGCCCCGGATAGCGGGCTGCAGAAGGAATCAGAATTTCCAGGTCAGACTGGCTGCAAGTTGCAGACCGTTaaa < 1:909872/98‑1 (MQ=255) G‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAat > 1:642932‑M1/1‑100 (MQ=255) GGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca < 2:373189‑M1/100‑1 (MQ=255) G‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCgg < 2:4080126‑M1/100‑1 (MQ=255) | ATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGG‑GGGGGG‑C‑TAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGG > NC_000913/379923‑380121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |