| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,570,714:1 | +T | 15.2% | coding (606/1974 nt) | glgX ← | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,570,714 | 1 | . | T | 15.2% | 644.0 / 130.2 | 204 | coding (606/1974 nt) | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base . (91/82); new base T (18/13); total (109/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACC > NC_000913/3570615‑3570813 | naGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCACATGCGTTGCAGACGTGGTTCACTGGCAAACTgc‑g > 2:1385607/2‑100 (MQ=255) cAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTgc‑g < 1:947415/100‑1 (MQ=255) aGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTAACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGGAAGCTgc‑gc < 1:2806638/100‑1 (MQ=255) ggCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑Gcc < 2:203481/100‑1 (MQ=255) cATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑Gcc > 1:4241219/1‑98 (MQ=255) tACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTg < 2:932113/100‑1 (MQ=255) aCGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTgg > 2:1595342/1‑100 (MQ=255) aCGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTgg < 1:1221398/100‑1 (MQ=255) cGCCGGATGCAGCGCAAACATCGCCACCTGGTTGTAACCCCATTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgc < 1:760565/100‑1 (MQ=255) cGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTGACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgc < 2:3446465/100‑1 (MQ=255) ccGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgcag < 1:4398133/100‑1 (MQ=255) cGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgcagc < 2:3947653/100‑1 (MQ=255) gATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGcagcag < 1:258381/100‑1 (MQ=255) aTGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGt < 1:1035815/100‑1 (MQ=255) aTGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGt < 2:2903391/100‑1 (MQ=255) tGCAGCGCAAACATCCCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtt < 1:510157/100‑1 (MQ=255) cAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttg < 1:3939384/100‑3 (MQ=255) cAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttg < 2:1871197/100‑3 (MQ=255) cAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTcc > 1:2826448/1‑100 (MQ=255) aGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCa > 2:102483/1‑100 (MQ=255) gcgcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTTACTGGCAAACTGCTGCCAGTGGC‑GCAGtttgcc < 2:1559075/100‑5 (MQ=38) gcgcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttgcc < 2:3119347/100‑5 (MQ=38) gcgcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttgcc < 1:787382/100‑5 (MQ=38) acgcAAACATCGCCACCGGGTTGTAACCCCAGAAGTTACTTAGACCCATGCGTTGCAGACGAAGTTCAATGGCAAACTAC‑ACCACTGGCAGCAGTTCCa > 1:1383185/2‑99 (MQ=255) gcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAgcg > 2:3361574/1‑100 (MQ=255) aacaacGCCACCAGGTTGTAAACCCAGTAGTTACTTAGCCCCATGCGTTGCAGACTTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttgcca < 1:370350/96‑6 (MQ=25) aaCATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCgg < 1:4145089/100‑1 (MQ=255) cGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAACCTGC‑GCCACCGGCCGCAGTCCCAGCGCGGt > 1:3373388/1‑96 (MQ=255) gCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGc > 1:2422704/1‑100 (MQ=255) cACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGccc < 2:1736133/100‑1 (MQ=255) cACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGccc < 2:3376000/100‑1 (MQ=255) cACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGAAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGccc > 1:3349226/1‑100 (MQ=255) aCCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCa > 2:602961/1‑100 (MQ=255) ccGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCaa > 1:1361683/1‑100 (MQ=255) ccGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACGGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCaa > 1:2965352/1‑100 (MQ=255) gggTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAAtt > 2:4087954/1‑100 (MQ=255) ggTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTg < 1:1455584/100‑1 (MQ=255) tGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGttt < 1:3629738/100‑1 (MQ=255) tGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGttt < 2:2331905/100‑1 (MQ=255) tGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGttt < 1:1739435/100‑1 (MQ=255) tAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCa < 1:2742487/100‑1 (MQ=255) tAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCa > 1:1325816/1‑100 (MQ=255) tAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCa < 1:1548216/100‑1 (MQ=255) tAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCa > 2:404579/1‑100 (MQ=255) ccccAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCaact > 2:180854/1‑98 (MQ=255) ccAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGTTAGCAGTTCAAACTCGGTAATGCCCAATTGTTTCAAATa > 1:2151051/1‑99 (MQ=255) cAGTAGTTACTTAGCCCCATGCGTGGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGt < 1:1481326/100‑1 (MQ=255) cAGTAGTTACTTAGCCCCATGCGATCCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGTCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGt < 1:1211299/100‑1 (MQ=255) agtagtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGtt < 1:2225319/100‑1 (MQ=255) gtagtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTg < 2:1219801/100‑1 (MQ=255) gtagtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTg > 2:886613/1‑100 (MQ=255) agtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGat < 1:2090157/100‑1 (MQ=255) gtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGatc > 1:4165708/1‑100 (MQ=255) ttACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGatca < 2:2518517/100‑1 (MQ=255) acatAGCCCCATGCGTGGCAGACGTTGTTGAGTGGCAAACTGC‑GCCACTGGCAGCAGGTCCAGCGCGGTAATGCCCAATTATGTCAAATAGTTGat < 1:3534850/93‑1 (MQ=255) aCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGTGCGGTAATGCCCAATTGTTTCAAATAGTTGatcatc > 2:4200532/1‑100 (MQ=255) aCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGatcatc > 2:38655/1‑100 (MQ=255) aCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTAC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGat < 1:4377934/96‑1 (MQ=255) cTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGAtcatca > 1:293302/1‑100 (MQ=255) tAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCAcc > 2:3589980/1‑100 (MQ=255) aGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCg < 2:579561/100‑1 (MQ=255) aGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCg < 1:1149256/100‑1 (MQ=255) aGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCg > 2:832057/1‑100 (MQ=255) aGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCg < 1:404578/100‑1 (MQ=255) gCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCgg > 1:3649268/1‑100 (MQ=255) gCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCgg > 1:3411221/1‑100 (MQ=255) nccATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGAt > 1:4212501/2‑100 (MQ=255) cATGCGTTGCAGACGTGGTTCACTGGCAAGCTGC‑GGCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGc > 2:3028307/1‑100 (MQ=255) cATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGc < 2:1484707/100‑1 (MQ=255) cATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGc > 2:3258495/1‑100 (MQ=255) cATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGc > 2:2646709/1‑100 (MQ=255) cGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGa > 2:3322524/1‑100 (MQ=255) gCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGc > 2:3333186/1‑100 (MQ=255) aGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGACtt < 1:4066870/100‑1 (MQ=255) aCGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTta < 2:2793517/100‑1 (MQ=255) gTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGTGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTtata > 2:2410778/1‑100 (MQ=255) gTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTtata < 2:376878/100‑1 (MQ=255) ggTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAg > 1:2395027/1‑100 (MQ=255) ggTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAg > 2:1308916/1‑100 (MQ=255) ttCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTg > 2:3057660/1‑100 (MQ=255) ttCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTg < 1:1199973/100‑1 (MQ=255) cTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCAc > 2:314941/1‑100 (MQ=255) cTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCAc > 1:2785572/1‑100 (MQ=255) tGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACg > 2:1335809/1‑100 (MQ=255) tGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCAGTAATGCCCAAATGGTTCAAATAGTTGAACATCCCCCGATGCCCGACGGCTGTACAAGTGCCAc > 1:1111696/1‑99 (MQ=255) ggCAAACTGT‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACgg > 1:1842357/1‑100 (MQ=255) ctggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACgg > 1:681909/5‑100 (MQ=38) tggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGa > 1:1287597/4‑100 (MQ=255) tggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCGTTATAAGTGCCACGGa > 1:4035550/4‑100 (MQ=255) gCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGa < 2:4343999/100‑1 (MQ=255) ggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAt > 2:2839958/3‑100 (MQ=255) ggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAt > 2:467022/3‑100 (MQ=255) cAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAt > 1:550100/1‑100 (MQ=255) cAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAt > 1:1708646/1‑100 (MQ=255) gaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAtc > 2:2431474/2‑100 (MQ=255) aaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAtct > 1:3314384/1‑100 (MQ=255) aaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGCACGCCCGACGGCCTTATAAGTccccc > 1:3749552/1‑92 (MQ=255) gc‑gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGCTCTCGAc > 1:3178133/1‑100 (MQ=255) gc‑gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGAc > 2:40760/1‑100 (MQ=255) gc‑gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGAc > 1:1930243/1‑100 (MQ=255) | GCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACC > NC_000913/3570615‑3570813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |