| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 561,696:1 | (G)6→7 | 100% | coding (2000/2604 nt) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 561,690 | 1 | . | G | 65.1% | 343.9 / 208.1 | 152 | coding (1994/2604 nt) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base . (29/24); new base G (49/50); total (78/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 172 total aligned reads displayed.
GCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGC > NC_000913/561594‑561784 | ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gg > 1:4162862/1‑100 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gg > 1:1532599/1‑100 (MQ=255) cacaACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCACTTACGGTACGC‑T‑‑g‑g‑ggg < 2:2001551/100‑1 (MQ=255) caACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑ggggg > 1:3507555/1‑99 (MQ=255) aaCCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gggggc < 2:2659826/100‑3 (MQ=255) aCCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gggggc > 1:2412453/1‑97 (MQ=255) aCCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCgg < 2:4384914/100‑1 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gggggcgg < 2:859539/100‑5 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gggggcggg > 2:2933678/1‑95 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑gggggcggg < 1:4249760/100‑6 (MQ=255) tGAGTTATCACATAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGt < 2:3505330/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATaa > 1:4267308/1‑100 (MQ=255) ttATCACGTAAGCCAGGGTGATACCTCGAATCATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑g‑g‑ggggggcgggtct > 1:3517383/1‑90 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAAc > 2:1414646/1‑100 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAAc < 2:583703/100‑1 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAAc < 1:4016505/100‑1 (MQ=255) aTCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACt > 2:3717539/1‑100 (MQ=255) aTCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTa < 2:4401531/100‑1 (MQ=255) tCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTa < 2:373455/100‑1 (MQ=255) tCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTa < 2:62515/100‑1 (MQ=255) cACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTAc > 1:3402833/1‑100 (MQ=255) cACGTAAGCCACGGGGATACCTCGAATAATGGGTACACGGGGAGCGCCACGGCCAACGGGTAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACt < 1:586718/98‑1 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACg > 1:4252119/1‑100 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACg > 2:494468/1‑100 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGAACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACg > 2:4185294/1‑100 (MQ=255) gTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACg < 2:4218552/98‑1 (MQ=255) gTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGAcc > 2:3014181/1‑100 (MQ=255) tAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGAcc > 2:4107250/1‑100 (MQ=255) aaGCCATGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACcg > 1:786622/1‑100 (MQ=255) aaGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACcgc < 1:763202/100‑1 (MQ=255) aGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACcgcg < 2:2432630/100‑1 (MQ=255) gCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGa > 2:1538780/1‑100 (MQ=255) ccAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGa > 1:1089314/1‑100 (MQ=255) ccAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGa > 2:2185637/1‑100 (MQ=255) tGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACa > 1:2388761/1‑100 (MQ=255) tGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACa > 1:825221/1‑100 (MQ=255) tGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACa < 2:3215307/100‑1 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATg > 2:359747/1‑100 (MQ=255) aCCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:3613104/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 2:3070476/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg < 2:287457/100‑1 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:140357/1‑100 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGt < 2:1356347/100‑1 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt < 2:3556183/100‑1 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt > 2:3305922/1‑100 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTAAGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGGGATAAACATGACGt > 1:3955988/1‑100 (MQ=255) cGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGt < 2:2128678/98‑1 (MQ=255) aatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTgg < 2:2801473/100‑1 (MQ=255) aatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTgg > 2:4163773/1‑100 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa < 2:2277702/100‑1 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa < 1:2204448/100‑1 (MQ=255) tGGGTACACGGGCAGCGCCACGGCAAACGGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCa < 1:3015991/100‑1 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg < 2:238486/100‑1 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg > 1:3235720/1‑100 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc < 2:2705617/100‑1 (MQ=255) gggTACACGGGCAGCGCCACGGCAAACTGCCAGGCCGCTTACGGTACGCTT‑‑G‑G‑GGGGCGGTTATAACTACGACCGCGATCAACATGACGTTAACTGGCAg < 1:3304986/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCGGGCCGCTGACGGTACGC‑TG‑G‑G‑GGGGCGGGTAGAACGACGACCGCGATCAACATGACGTTAACTGGCa < 1:2870521/98‑1 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg < 2:1513147/100‑1 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg > 1:1276234/1‑100 (MQ=255) cGGGCAGCGCCACGGCAACCTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTAGCAg > 1:491075/1‑92 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg > 2:2048937/1‑100 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg < 1:2185630/100‑1 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg > 1:3136932/1‑100 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg > 1:1714437/1‑100 (MQ=255) cAGCGCCACAGCAAACGGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg < 2:1260601/99‑1 (MQ=255) aGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtg < 1:570600/100‑1 (MQ=255) cgcCACGGCAAACTTGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtg < 1:3950850/99‑1 (MQ=255) cgcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtgt < 2:4313759/100‑1 (MQ=255) gcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTCTCTGGCGGtgtg > 1:1640991/1‑100 (MQ=255) cACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGt < 1:292487/100‑1 (MQ=255) cACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑GCG‑GGGGCGTGTATAACTACGACCGCGATCAACAGGACGTTAACTGGCAGCTGGCTGGCGGggtgtt > 1:1730433/1‑98 (MQ=255) cACGGCAAACTGGCAGGCCGCTTACGCTACGC‑TG‑G‑G‑GGGGGGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGggtggt > 2:2688098/1‑100 (MQ=255) aCGGCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTc > 1:1141798/1‑100 (MQ=255) cGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCgg > 2:2493370/1‑100 (MQ=255) ggCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 1:3763413/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 2:3277376/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 2:1714444/100‑1 (MQ=255) cAAACTGGCAGGCCGCCTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGc < 1:1068447/100‑1 (MQ=255) aaaCTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCa > 2:2375052/1‑100 (MQ=255) aaaCTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCa > 1:1511636/1‑100 (MQ=255) aCTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATg > 2:3646848/1‑100 (MQ=255) aCTGGCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGACGGCGAGGTCGGGCATg > 1:3352044/1‑100 (MQ=255) aCTGGCAGGCCGATTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATTAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATg < 2:1918897/100‑1 (MQ=255) gCAGGCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaaaa < 2:746549/100‑1 (MQ=255) ggCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc > 1:1977489/1‑100 (MQ=255) gCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc < 2:1662609/100‑1 (MQ=255) gCCGCTTACGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc < 2:1845477/100‑1 (MQ=255) gCCGCTTACGGTACGC‑T‑‑G‑GTGGGGCGGGTATCACTACGACCGGGATCAACAGGACGTTGACTGGCTGCCGTCTGGGGGTGCGGTCGGGCCTGAAAATTGc > 1:1387569/1‑100 (MQ=255) ccGCTTACGGTACGC‑TGGG‑G‑GGGGCGAGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc > 2:2689950/1‑100 (MQ=255) cggttACGGTACGC‑T‑‑G‑G‑GGGGGGGGTATAACGGCGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATg < 1:2790648/92‑1 (MQ=255) cTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAAc > 2:2523640/1‑100 (MQ=255) tACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGc > 1:1609529/1‑100 (MQ=255) aCGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGc < 2:3620066/100‑1 (MQ=255) aCGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGc < 1:1149896/100‑1 (MQ=255) cGGTACGC‑TG‑G‑G‑GGGGCGGGTATAACTATGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCt < 1:1473455/100‑1 (MQ=255) ggTACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg > 1:110186/1‑100 (MQ=255) tACGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGCGTGGTCGGGCATGAAAATGGCATAACGCTGag < 2:4191611/100‑1 (MQ=255) tACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCTCGATCAACATGACTTTAACTGGCAGCTGTCTGGCGGTGTTGTCGCGCATGAAAATGGCATAACGCTGagc < 1:1432539/100‑1 (MQ=255) aCGC‑TG‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGagc < 2:2788916/100‑1 (MQ=255) aCGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCt > 1:3694175/1‑95 (MQ=255) | GCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGC > NC_000913/561594‑561784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |