| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,053,516:1 | (G)6→7 | 100% | coding (2663/2745 nt) | torS ← | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,053,510 | 1 | . | G | 68.8% | 336.6 / 167.3 | 138 | coding (2669/2745 nt) | torS | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Reads supporting (aligned to +/- strand): ref base . (17/26); new base G (52/43); total (69/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGCGG > NC_000913/1053411‑1053606 | cTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑g > 2:123876/1‑100 (MQ=255) tatcTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGATTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑ggg < 1:443294/97‑1 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑ggg < 1:3298309/100‑1 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑ggg < 2:1630652/100‑1 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑ggg > 1:3405802/1‑100 (MQ=255) aaCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑gggg < 2:606133/100‑1 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑gggggc > 1:3135086/1‑98 (MQ=255) tGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑gggggca < 1:1392398/100‑4 (MQ=255) tGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑gggggc < 1:3041278/99‑3 (MQ=255) gtcTGAGATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑gg‑gggggcag < 1:2672076/98‑5 (MQ=255) atatTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATg < 1:4121867/100‑1 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgc > 1:555522/1‑100 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgc < 2:877889/100‑1 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGgct < 2:1547361/100‑1 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgctgc > 1:2251234/1‑100 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGgctgct < 2:2370545/100‑1 (MQ=255) ttCAAATCGCGTTCAGGTCTTTCTTATGCAACTATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgctgct < 1:2493050/100‑1 (MQ=255) ttCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgctgct > 1:4120637/1‑100 (MQ=255) cAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGgctgctgct > 1:3897283/1‑100 (MQ=255) aaaTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGgctgctgct > 2:2504458/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTcc > 1:4210464/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTcc < 2:4305761/100‑1 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTcc > 1:1122114/1‑100 (MQ=255) cgcgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGt < 1:514018/100‑1 (MQ=255) gcgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGt < 2:711827/100‑1 (MQ=255) cgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGtt > 1:1253527/1‑100 (MQ=255) gTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGGTCAGATAATGGCTGCTGCTCCAGtt > 1:111110/1‑99 (MQ=255) ttCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTtgt > 1:2196411/1‑100 (MQ=255) cAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTgc > 2:2733322/1‑100 (MQ=255) aGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTgcgc < 2:3551627/100‑1 (MQ=255) ggTCTTTCTTCTGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GTGG‑TAGATAATGGCTGCTGCTCCAGTTGTGCGCa < 1:2892830/100‑1 (MQ=255) ggTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GAGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCa > 1:1684816/1‑100 (MQ=255) gTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCa < 1:24322/100‑1 (MQ=255) tctttcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCAt < 2:890573/100‑1 (MQ=255) ctttcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATa < 1:840833/100‑1 (MQ=255) ctttcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATa > 2:2249981/1‑100 (MQ=255) tcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctg < 2:4102927/100‑1 (MQ=255) cttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctg > 2:3909366/1‑100 (MQ=255) cttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctg < 2:609465/100‑1 (MQ=255) ttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc < 1:2675812/100‑1 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 1:396575/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc < 2:2814175/100‑1 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc < 2:3262451/100‑1 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 2:4023264/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 2:4096492/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggc > 1:567368/1‑100 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggct > 1:825862/1‑100 (MQ=255) aTGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggct > 2:907441/1‑100 (MQ=255) tGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggctg < 2:818435/100‑1 (MQ=255) cAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAGTGGCTGCTGCTCCAGTTGTGCGCATAGCtggctggc < 2:1964776/100‑1 (MQ=255) aaCCATGCTTTCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCg < 1:998750/99‑1 (MQ=255) aCCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGat > 2:439756/1‑100 (MQ=255) cATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGatat < 1:4148256/100‑1 (MQ=255) aTGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATg < 2:238419/100‑1 (MQ=255) tGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATg < 2:3007003/100‑1 (MQ=255) cTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGTCTGCTGCTCCAGTTGTGCGCATAGATGGCTGCAGatatccc > 1:2583861/1‑97 (MQ=255) cTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCa > 2:1953982/1‑100 (MQ=255) tCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCAtt > 1:1693660/1‑100 (MQ=255) tCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCAtt > 1:2064026/1‑99 (MQ=255) agagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTccc > 1:4071371/1‑100 (MQ=255) agagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCa > 1:977851/1‑100 (MQ=255) agagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCa < 1:2833923/100‑1 (MQ=255) gagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAg < 1:4286231/100‑1 (MQ=255) gagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGGTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAg < 2:1683886/100‑1 (MQ=255) cGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACt < 2:3160044/100‑1 (MQ=255) ggCACCACTGCGTTCAATTTCTTCGTTTGGAA‑‑‑GGTGGGG‑AAGATAATGGTTGCTGCTCCAGTTGTGCGCATAGCTGGCTGACGATATGCATTCCCAGACt < 1:3846486/100‑1 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCCGTTGTGCGCCTAGCTGGCTGGCGCTATGCCTTCCCAGAc > 1:2998072/1‑99 (MQ=255) ggCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACt > 2:2250247/1‑100 (MQ=255) cAACACTGCGTGTAATTTCTTCGTGTGGAAGGGGG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACt > 1:1067443/1‑100 (MQ=255) aaCACTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGa < 2:66757/100‑1 (MQ=255) acacTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg > 1:1372569/1‑100 (MQ=255) acacTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg < 1:120573/100‑1 (MQ=255) acacTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg < 1:759067/100‑1 (MQ=255) cacTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGc < 1:4096462/100‑1 (MQ=255) cacTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGc < 2:1384217/100‑1 (MQ=255) acTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa < 2:1759508/100‑1 (MQ=255) acTGCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa > 1:3475697/1‑100 (MQ=255) cTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCTAGCAAc < 1:1126161/100‑1 (MQ=255) gCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACt > 2:2673697/1‑100 (MQ=255) gCGTGTAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACt > 2:3431741/1‑100 (MQ=255) tttAATTTTTGCGTGTGGAA‑‑‑TG‑GGGG‑CAGATAATGTCTGCTGCTCCAGTTGTGCGCATAGCTGCCTGGCGATATGCATTCCCAGACTCGAGCAACTg < 1:4318031/95‑1 (MQ=255) tgtAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCt > 1:689284/1‑100 (MQ=255) gtAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCtt > 1:3170163/1‑100 (MQ=255) tAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttt < 1:559359/100‑1 (MQ=255) tAATTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttt < 2:243432/100‑1 (MQ=255) aaTTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttt > 1:566321/1‑100 (MQ=255) aaTTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttt < 2:1856183/100‑1 (MQ=255) aTTTCTTCGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttn < 2:201239/100‑2 (MQ=255) cgatctcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGATGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttt < 2:820978/92‑1 (MQ=255) ttcttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAg < 2:4318177/100‑1 (MQ=255) ttcttcGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGc < 1:2033690/100‑1 (MQ=255) tcttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGc < 2:2837242/100‑1 (MQ=255) tcttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGc < 1:329628/100‑1 (MQ=255) cttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAggt < 2:2979334/100‑3 (MQ=255) cttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCt < 2:3163903/100‑1 (MQ=255) ttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg > 2:2581028/1‑100 (MQ=255) ttcGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg > 2:4050808/1‑100 (MQ=255) cGTGTGGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGAt < 2:2196421/100‑1 (MQ=255) tgtgGAAG‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgc < 2:3552322/100‑1 (MQ=255) ggAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGCgg > 2:4357022/1‑100 (MQ=255) | GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑‑GG‑GGGG‑CAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGCGG > NC_000913/1053411‑1053606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |