| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3827429 | NA (NA) | 16 (0.110) | 8/164 | NT | NA | intergenic (+138/+31) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | NC_000913 | = 3827451 | NA (NA) | intergenic (+160/+9) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
CCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcggcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3827331‑3827429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < NC_000913/3827451‑3827346 CCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTG > 1:2230020/1‑100CCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTG > 2:3529690/1‑100 CTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGC < 2:1907301/100‑1 TTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCG < 1:739633/100‑1 CCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGC < 2:1562426/100‑1 CCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGC < 2:3631450/100‑1 CTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCG > 2:2103967/1‑100 CTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCG < 1:3613957/100‑1 CTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCG > 1:2640923/1‑100 CTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCG < 2:4383676/100‑1 CTGCCGGATGCGATTCATCACCCTACAAATCCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGCCTTTGTTGCGGCG > 1:422798/1‑100 TGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGG > 2:604288/1‑100 CGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGC > 2:2398015/1‑100 ATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGC < 2:3476817/100‑1 TCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGGAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCA < 1:2077753/100‑1 ACCCTACTAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCGTTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 1:2368717/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGTTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 1:2398005/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 1:1163149/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 2:44943/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 2:1138283/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 1:2312271/100‑1 ACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAAC < 1:3516352/100‑1 CCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAACA < 1:1766674/100‑1 TACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAACAAAG < 2:1290524/100‑1 CAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGCCGCAACAAAGAC < 2:2801286/100‑1 AAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGTAGAAGTGCCGACGCAACAAAGAC < 1:1528108/99‑1 TGTCTTTGTTGCGGCGGCACTTCTACCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAA > 1:68051/1‑97 CTTTGTTGCGGCGGCACTTCTACCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTA > 1:732996/1‑100 GCGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGAT < 1:1675806/100‑1 GCGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGAT < 2:1386305/100‑1 GCGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATAAGCTTCGCTTATCAAACCTGCGCATTGATCAATAATTTATTGTATTTGTAGGGCGAT > 1:520193/1‑100 CGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATG > 2:742242/1‑100 GGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTTATAATTTATTGAATTTGTAGGGTGATGA > 2:350139/1‑100 GCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAA < 2:101154/100‑1 GCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAA < 1:2574599/100‑1 CGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAAT > 1:1509705/1‑100 GGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATC > 2:3658763/1‑100 GGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATC < 1:2808118/100‑1 GGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATC > 1:261902/1‑100 GGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATC < 2:650579/100‑1 GGTAGAAGTGCCGCCGAAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATC < 2:401518/100‑1 GTAGAAGTGCCGCTGCAACAAAGACTAATGCTTGATACTCTTCGCTTATCAAGTCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < 1:3024627/100‑1 GTAGAAGTGCCGCCGCCACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATCTATTGAATACGTAGGGTGATGCATCG > 2:1317766/1‑100 GTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < 1:621419/100‑1 GTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < 1:2955690/100‑1 GTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < 2:4370469/100‑1 GTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGAGTATTGATTCATAATTTATTGTATTTGTAGGGTGATGAATCG < 1:3503851/100‑1 CCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcggcgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3827331‑3827429‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGGCGGTAGAAGTGCCGCCGCAACAAAGACAAATGCCTGATACGCTTCGCTTATCAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCG < NC_000913/3827451‑3827346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |