New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4306837120 (0.760)20 (0.150) 10/156 NT 15.2% intergenic (‑240/+33) yjcS/alsK metallo‑beta‑lactamase superfamily protein/D‑allose kinase
?NC_000913 = 4306852 119 (0.870)intergenic (‑255/+18) yjcS/alsK metallo‑beta‑lactamase superfamily protein/D‑allose kinase

ATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4306728‑4306837
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttggcacagTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAATT  <  NC_000913/4306852‑4306754
                                                                                                                                                                                                                 
ATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTC                                                                                                               <  1:2605708/100‑1
ATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTC                                                                                                               >  1:1282862/1‑100
 TTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGACGTTTTATGTGTTTATTATATATATTGTACCTGTCG                                                                                                              >  2:4406300/1‑100
   AGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTT                                                                                                            >  1:1692728/1‑100
   AGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTT                                                                                                            <  2:1019565/100‑1
   AGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATAGGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTT                                                                                                            >  1:3087691/1‑100
    GGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTG                                                                                                           >  2:2773164/1‑100
    GGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTG                                                                                                           >  2:4044033/1‑100
    GGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTG                                                                                                           >  2:3968041/1‑100
    GGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTT                                                                                                            >  1:1755753/1‑99
     GCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGG                                                                                                          <  1:1073237/100‑1
     GCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGG                                                                                                          <  1:1961966/100‑1
     GCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGG                                                                                                          <  2:3417005/100‑1
     GCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGG                                                                                                          <  1:3109323/100‑1
      CATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGC                                                                                                         >  2:758880/1‑100
      CATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGC                                                                                                         >  2:4095995/1‑100
      CATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGC                                                                                                         <  2:1754239/100‑1
        TTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCAC                                                                                                       >  2:2557290/1‑100
        TTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCAC                                                                                                       >  2:909212/1‑100
          TGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAG                                                                                                     <  2:1160632/100‑1
                           ATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCT                                                                                    >  1:2309117/1‑100
                              ACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTG                                                                                 <  1:3859871/100‑1
                                  TAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAA                                                                             <  2:3189109/100‑1
                                  TAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAA                                                                             <  1:22980/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  2:4204054/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  2:2934803/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  1:535230/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  2:288845/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  1:212880/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  2:4411902/100‑1
                                   AAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAAC                                                                            <  2:2309127/100‑1
                                    AAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACG                                                                           <  2:394702/100‑1
                                    AAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACG                                                                           <  2:573958/100‑1
                                    AAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACG                                                                           <  2:2354900/100‑1
                                    AAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACG                                                                           <  2:1176562/100‑1
                                     AACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATGATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGA                                                                          <  1:2512522/100‑1
                                       CTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGAC                                                                         <  1:2063407/99‑1
                                                    AAATAATATGAGTCTTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATA                                                           <  2:1463405/100‑1
                                                                  GTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGTAGAGTAATATCCCGCTGTGCTAACGACAGGTACAATATATATAATAAACACAT                                               <  1:601147/98‑1
                                                                                     TATATTGTACCTGTCGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTC                          <  2:3365791/100‑1
                                                                                                   CGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTT            >  1:1185925/1‑100
                                                                                                   CGTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTT            <  1:342203/100‑1
                                                                                                    GTTGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTT           >  2:4312094/1‑100
                                                                                                      TGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         <  2:2018244/100‑1
                                                                                                      TGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         <  2:2749483/100‑1
                                                                                                      TGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         <  1:560785/100‑1
                                                                                                      TGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         >  2:579162/1‑100
                                                                                                      TGGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         >  1:2660666/1‑100
                                                                                                       GGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACACTATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACT        <  1:3085671/100‑1
                                                                                                       GGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACT        >  1:2591607/1‑100
                                                                                                       GGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACT        >  1:3471973/1‑100
                                                                                                       GGCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         <  2:812415/99‑1
                                                                                                       GGCACAGTAGCGCAATGTCCCGCTCTGCCAACAACAGGTACAATATATATAATAATCACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTAC         <  1:1891215/99‑1
                                                                                                        GCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTG       >  2:3494726/1‑100
                                                                                                        GCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTG       >  1:3601594/1‑100
                                                                                                        GCACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTG       <  2:697752/100‑1
                                                                                                         CACAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGT      >  1:3774144/1‑100
                                                                                                           CAGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAA    >  2:4243747/1‑100
                                                                                                            AGTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAAT   <  1:1159714/100‑1
                                                                                                             GTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAATT  >  2:2080545/1‑100
                                                                                                             GTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAATT  >  1:1981621/1‑100
                                                                                                             GTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAATT  >  1:68036/1‑100
                                                                                                                                                                                                                 
ATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4306728‑4306837
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttggcacagTAGCGCAATGTCCCGCTGTGCCAACGACAGGTACAATATATATAATAAACACATAAAACGACTCATATTATTTTCTGCAATGATAGTTTTACTGTAATT  <  NC_000913/4306852‑4306754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.