New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)44 (0.290) 17/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 160 total aligned reads displayed.

TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccc‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917
                                                                                                                                                                                                            
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCTGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  1:2295242/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:557821/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  1:3267440/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         >  2:404832/1‑100
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         >  2:1383980/1‑100
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:3775705/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:3561921/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         >  1:1803078/1‑100
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:1418347/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                        >  2:1770810/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:4408719/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  1:3665879/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  1:1433844/100‑1
  CGACAAACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:3089134/100‑1
   tccgatCTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:3544107/94‑1
   GACACACTATCATTAACTGAATCCATGGGTTAATGAGGCGAACCGGGGGAACTGAAACAGCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:508715/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:1196692/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:1758814/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  1:986721/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2583658/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:1885537/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:1970478/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2079572/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2080593/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:2272046/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:252469/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:1090027/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:3196918/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:4008947/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:4128159/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:4231555/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:698384/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:830986/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:1319596/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:406432/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:2069207/100‑1
   GACACACGATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:2734227/100‑1
     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCTGGGGAACTGAAACATATAAGTACAGCGAGGAAAAGAAATCAACCTAGATT‑CC                                                                                                         >  1:3899325/1‑95
       CACTATCACTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCCAGGAACAGAAATCAACCGAGCTA‑CCCCC                                                                                                      >  1:2529158/1‑96
                      AATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGG                                                                                  <  2:1400935/100‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGGACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGG                                                                                 <  1:800647/100‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGG                                                                                 <  2:128698/100‑1
                         CCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGG                                                                               <  2:434721/100‑1
                         CCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACAGCGAAGTTCGCCGAGTAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGG                                                                               <  1:415662/100‑1
                          CATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGA                                                                              <  2:1541368/100‑1
                           ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCC‑GTTCGCTCGCCGCTACTGGGGGA                                                                              <  1:2574742/100‑1
                             AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATC                                                                           <  2:645424/100‑1
                             AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCT                                                                          <  2:4400488/100‑1
                              GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCT                                                                          <  1:97099/100‑1
                              GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTC                                                                         <  2:1732791/100‑1
                                TTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCG                                                                        <  1:4146393/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGG                                                                       <  2:3380202/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGG                                                                       <  2:255350/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  2:2722240/100‑1
                                  AATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGG                                                                       <  1:1469478/100‑1
                                  AATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  2:84446/100‑1
                                  AATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  1:4281316/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGGAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  1:2828676/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCAGTTCGCTCGCCGCTACTGGGGCACTCTCGGT                                                                      <  1:3107489/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  2:2012411/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  2:2178716/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  1:1218028/100‑1
                                    TGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  2:3159976/100‑1
                                    TGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTG                                                                    <  2:3923802/100‑1
                                               GGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTn                                                          <  1:1665446/98‑2
                                                                                                tgcgCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC           <  1:1603780/94‑1
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGTCTTCTTTTCCTCTGGGTACTTAGATGTGTCAGTTCCGCCGGTTCGCCTCATAAACCTATG       >  1:1368907/1‑98
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:1571251/100‑1
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:1961659/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:1062763/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  2:2786314/100‑1
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1940441/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:856374/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:3553157/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  2:2873464/98‑1
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTGCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:3708026/1‑100
                                                                                                    CCCC‑GTTCGCTCCCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  1:3425070/98‑1
                                                                                                    CCCC‑GTGCGCTCGCCGCTACTGGCGGAATCTCGGTTGCTTTCTTGTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:1501276/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCTGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  1:4258386/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  1:1203653/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:3729345/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  2:2344924/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  2:3364258/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:2891431/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  1:4244610/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  2:1168064/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:1799499/99‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:742562/1‑99
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGG      >  2:4069721/1‑98
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGCGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGG      <  1:2364574/98‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTCCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  1:343736/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:3448325/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:937892/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  1:727789/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   <  1:2119743/100‑1
                                                                                                       C‑GTTGGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGAACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:2086497/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  2:1070530/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:3197/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  2:2054938/1‑100
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  1:4023525/1‑100
                                                                                                                                                                                                            
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccc‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.