New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258602NA (NA)43 (0.290) 11/168 NT NA noncoding (74/768 nt) IS1 repeat region
?NC_000913 = 279836 NA (NA)noncoding (95/768 nt) IS1 repeat region

AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258499‑258602
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  <  NC_000913/279836‑279738
                                                                                                                                                                                                           
AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGAC                                                                                                         <  1:2294064/100‑1
AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGAC                                                                                                         >  2:1706656/1‑100
AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGAC                                                                                                         >  2:115131/1‑100
 GTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCTCGTCAGTAGCTGAACAGGAGGGACA                                                                                                        >  1:509263/1‑100
 GTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACA                                                                                                        >  2:125895/1‑100
  TTGCCATGTTTTACGGCAGTGATAGCAGAGATAGCGCTGATGTCCGGTGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGAC                                                                                                         <  1:304462/98‑1
   TGCCATGTTTTACGGCAGTTAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      <  2:2158177/100‑1
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTAGGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      >  2:4184649/1‑100
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      >  2:3988210/1‑100
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      <  2:2354213/100‑1
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      <  2:1614638/100‑1
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      <  2:809631/100‑1
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCAACCCGTCAGTAGCTGAACAGGAGGGACAG                                                                                                       >  1:3713214/1‑99
   TGCCATGTTTTACGGCAGTGAGAGCAGAGATACCGCTGATGTCCGGCGGGGCTGTTGCCGTTACGCACCACGCCGTCAGTAGCTGAACAGGAGGGACAGC                                                                                                      >  1:3127177/1‑100
    GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCTGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT                                                                                                     >  1:2566285/1‑100
    GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT                                                                                                     <  2:376789/100‑1
    GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT                                                                                                     >  1:1020476/1‑100
    GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT                                                                                                     >  2:5530/1‑100
    GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCAGTTACGCACAAACCCGTCAGTAGCTGAACAGGAGGGACAGCT                                                                                                     >  1:1813057/1‑100
                                                            CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTG                                             >  2:2117988/1‑100
                                                             CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGC                                            >  1:2048914/1‑100
                                                                  CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCA                                       >  2:1845262/1‑100
                                                                      CCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGC                                   >  2:1289146/1‑100
                                                                        ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCG                                 >  2:512945/1‑100
                                                                         CCCCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGT                                >  2:4203298/1‑100
                                                                          nCCGTCAGTAGCTGAACAGGAGGGACAGCTACGGAAGGGGTGGTGCGTAACGGCAAAAGCACTGCTGGACATCAGCGCTATCTCTGCTCTCACTGCCGTA                               >  1:324539/2‑100
                                                                           CCGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTA                               >  1:3618388/1‑99
                                                                            CGTCAGTAGCTGAACAGTAGGGACAGCTACCGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAA                             >  1:1998515/1‑100
                                                                            CGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAA                             >  1:2677363/1‑100
                                                                            CGTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCCCTACCGTAA                              >  1:3968656/1‑99
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTCACGGCAAAAGCCCTGCCAGACATCAGCGCTATCTCccc                                            >  1:3783296/1‑81
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGGCATCAGCGCTATCCTTGCTCTCACTGCCGTAAAA                            >  1:929452/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA                            >  1:109761/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA                            >  1:2239325/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA                            >  2:600407/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA                            >  1:1476707/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA                            >  1:2336443/1‑100
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGGAACGGCAAAAGCACTGCCGGACATCAGCGCCATCTCTGCCCTCACTGCCGGAAA                             >  1:3545540/1‑99
                                                                             GTCAGTAGCTGAACAGGAGGGACAGCTACTGACGGCGTAGTGCGTCACGGCAAAAGCACCGCCGCACATCCGCGCTATCTCTGCTCTCCCTGCCGTAAA                             >  1:1390174/1‑99
                                                                              TCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCCTGCCGTAAAAC                           >  2:1156007/1‑100
                                                                              TCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAAC                           >  1:201676/1‑100
                                                                              TCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTACCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAAC                           >  2:1791484/1‑100
                                                                              TCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTACCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAAC                           >  2:1791438/1‑100
                                                                              TCAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAAC                           >  2:2668516/1‑100
                                                                               CAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTCTCTCTGCTCTCACTGCCGTAAAACA                          >  1:3695060/1‑100
                                                                               CAGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGACGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACA                          >  1:2514485/1‑100
                                                                                AGTAGCTGAACAGGAGGGACTGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:2700849/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:411161/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:3798187/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:3614508/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  2:2757922/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:1362129/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  1:3627295/1‑100
                                                                                AGTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACAT                         >  2:4030251/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGGACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  1:4370234/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  2:2396478/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  1:2665153/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  2:2487536/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  2:974099/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  2:3800396/1‑100
                                                                                 GTAGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATG                        >  1:1673849/1‑100
                                                                                   AGCTGAACAGGAGGGACAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGC                      >  1:1031457/1‑100
                                                                                                  tgAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTT       >  2:2981664/3‑100
                                                                                                   CAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATGTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      >  1:2825801/1‑100
                                                                                                   CAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      >  2:3427633/1‑100
                                                                                                   CAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      <  2:3219385/100‑1
                                                                                                   CAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      >  1:326391/1‑100
                                                                                                   CAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTT       >  1:3705933/1‑99
                                                                                                   CAGCTACTGACGGGGTGGGGCGTAACGGAAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      <  1:647587/100‑1
                                                                                                   CAGCCACTGACGGGGTGGTGCGTAATGGCAAAAGCACTGCCGTACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTT       <  1:3505560/99‑1
                                                                                                    AGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTAC     <  2:959069/100‑1
                                                                                                     GCTACTTACGGGGTGGGGCGTAACGGCAAAAGCACTGCCGTACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    <  1:1308800/100‑1
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCACAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTAC     >  1:2682603/1‑99
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    >  1:492132/1‑100
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    >  2:611580/1‑100
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    >  1:147586/1‑100
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    <  2:1023955/100‑1
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    >  1:3759964/1‑100
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACA    >  2:2482089/1‑100
                                                                                                     GCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTA      <  1:380284/98‑1
                                                                                                      CTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTGAAACATGGCAACTGCAGTTCACTTACAC   >  1:1524902/1‑100
                                                                                                      CTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACAC   >  1:3179562/1‑100
                                                                                                      CTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACAC   <  2:3380263/100‑1
                                                                                                       TACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  >  1:3177524/1‑100
                                                                                                       TACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  <  1:2597955/100‑1
                                                                                                       TACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  <  1:603955/100‑1
                                                                                                       TACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  <  2:2600362/100‑1
                                                                                                       TACTGACGGGGTGGTACGTAACGGCAAAAGCACTGCAGTACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATAGCAACTGCAGTTCACTTACA    <  1:1956768/98‑1
                                                                                                                                                                                                           
AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258499‑258602
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACC  <  NC_000913/279836‑279738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.