Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_000913 380,020 (G)10→7 100% intergenic (‑139/+47) frmR ← / ← yaiO regulator protein that represses frmRAB operon/outer membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 380016 =12 (0.080)124 (0.860) 71/164 NT 91.8% intergenic (‑135/+53) frmR/yaiO regulator protein that represses frmRAB operon/outer membrane protein
?NC_000913 = 380012 11 (0.080)intergenic (‑131/+57) frmR/yaiO regulator protein that represses frmRAB operon/outer membrane protein

Only 100 of 147 total aligned reads displayed.

CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/380121‑380016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT  <  NC_000913/380012‑379915
                                                                                                                                                                                                              
CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGC                                                                                                          <  2:4080126/100‑1
CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCCGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGC                                                                                                          <  2:3097963/100‑1
 CGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTTGAAATTCTGATTCCTTCTGCCCCCCGTTATCCGGGGCGGCCTTCCCTGCCGATTAGCt                                                                                                         <  2:837484/100‑2
   ATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCC                                                                                                       <  1:177372/100‑1
    TGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCC                                                                                                      <  2:373189/100‑1
      ATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCC                                                                                                    <  1:738084/100‑1
      ATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCC                                                                                                    >  1:642932/1‑100
          TAACGGTCTGCAACTTGCAGCCTGTCTGACCTTGAAATTCTGATTCCTTCTGCCGCCAGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTC                                                                                                >  1:2087370/1‑100
            ACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCT                                                                                              >  1:1861286/1‑100
             CGGGCTGCAAGTTGCAGACCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCT                                                                                              >  1:1120099/1‑100
                TCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTT                                                                                          >  2:4308000/1‑100
                  TGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG                                                                                         >  2:2660012/1‑100
                  TGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG                                                                                         <  2:2784218/100‑1
                  TGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG                                                                                         >  2:1762986/1‑100
                  TGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG                                                                                         >  2:741579/1‑100
                   GCAACTTGCAGCCCGTCTGTCCTGGAAATTCTGATTCCTTCTGCCGCCCGCTCTCCGGGGCGGTCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT                                                                                        <  1:1003096/100‑1
                   GCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT                                                                                        >  2:3453795/1‑100
                   GCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT                                                                                        <  1:494719/100‑1
                   GCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGT                                                                                        <  1:946849/100‑1
                   GCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGCGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTG                                                                                         >  1:2013642/1‑99
                        TTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCC                                                                                   <  2:1397200/100‑1
                         TGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCG                                                                                  <  2:3240289/100‑1
                          GCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGA                                                                                 >  1:1168174/1‑100
                           CAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGAC                                                                                >  2:381956/1‑100
                            AGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACC                                                                               <  1:103457/100‑1
                             GCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCA                                                                              >  1:4194432/1‑100
                               CCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACA                                                                            <  1:4275075/100‑1
                                CGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGCCCACAT                                                                           >  1:877555/1‑100
                                CGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACAT                                                                           >  2:2209290/1‑100
                                       CCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCAagatcggaag                                                                    >  2:2470544/1‑90
                                        CTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGAT                                                                  >  2:706854/1‑100
                                         TGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGAT                                                                  >  1:3293009/1‑100
                                          GGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCCCTTAGTTTTCCGACCACATTCACC                                                                      >  1:2932894/1‑95
                                             atcTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAAT                                                              <  1:3157221/97‑1
                                             AATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAAT                                                              >  2:4361130/1‑100
                                             AATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACACTCACCGGATAAA                                                               >  1:3374277/1‑99
                                              ATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATT                                                             <  2:4228926/100‑1
                                               TTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTT                                                            >  2:4165704/1‑100
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTGACCAGATcggaagag                                                          >  2:4343749/1‑92
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATagat                                                          >  2:3157239/1‑96
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTA                                                          <  1:997196/100‑1
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTA                                                          >  1:2136192/1‑100
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTA                                                          <  2:846824/100‑1
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTT                                                           >  1:1772253/1‑99
                                                 CTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTAT                                                         >  2:2462389/1‑100
                                                  TGATTCCTTCTGCCGCCCGCTATCCGGTGAGGCCTTCCCTGCCGATTATCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTAT                                                         <  1:250421/100‑1
                                                  TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTAT                                                         >  1:111423/1‑100
                                                  TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTAT                                                         >  1:4406983/1‑100
                                                   GATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATT                                                        >  2:3330522/1‑100
                                                   GATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTC                                                       >  1:1440641/1‑100
                                                    ATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAATTTTTAT                                                         >  1:2676069/1‑98
                                                     TTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCT                                                      >  1:3747500/1‑100
                                                       CCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTC                                                     >  1:968682/1‑99
                                                        CTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGGTCTCCTACCAAATTCACCGGATAAATTTTATTCTac                                                    >  1:2176902/1‑97
                                                         TTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGT                                                 <  1:692232/100‑1
                                                          TCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGT                                                 <  2:3874753/100‑1
                                                           CTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTG                                                >  2:1548087/1‑100
                                                            TGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGT                                               >  1:1236287/1‑100
                                                            TGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGT                                               >  1:2063147/1‑100
                                                            TGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCCCTTTGTTTTCCGACCACCTTCACCGGATAAATTTTATTCTCCATTG                                                >  2:2109115/1‑99
                                                              CCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTA                                             <  2:2521660/100‑1
                                                               CGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTAT                                            >  1:2710734/1‑100
                                                               CGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTAT                                            >  2:2620604/1‑100
                                                               CGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTAT                                            >  2:4386513/1‑100
                                                                GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATA                                           >  1:293425/1‑100
                                                                 CCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTA                                             <  1:2540321/97‑1
                                                                  CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATA                                         >  1:260159/1‑100
                                                                  CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATA                                         <  2:1231238/100‑1
                                                                  CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATAC                                        <  2:2436930/100‑1
                                                                   CGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATAC                                        <  2:2948186/100‑1
                                                                         CCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGG                                 >  1:1016391/1‑100
                                                                          cgatctGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGG                                 <  2:1566445/94‑1
                                                                           GGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGG                                >  1:928232/1‑100
                                                                            GGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGG                                >  1:2480113/1‑99
                                                                               CGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTA                            <  2:1779301/100‑1
                                                                               CGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTA                            <  1:751224/100‑1
                                                                               CGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTA                            >  1:1600493/1‑100
                                                                                GGCCCTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACCTTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTAT                           >  1:135591/1‑100
                                                                                  CCTTCCCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATCCTATAGGGGGGTATtct                        >  2:1024854/1‑97
                                                                                   CTTCCCTGCCTATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTAGTCTCCAGTGTTATATACTATAGGGGGGTATGCA                        <  1:2891832/100‑1
                                                                                    TTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCAT                       <  2:4105246/100‑1
                                                                                     TCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATT                      <  2:924818/100‑1
                                                                                     TCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATT                      <  1:3894526/100‑1
                                                                                      CCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTG                     <  1:1801191/100‑1
                                                                                       CCTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATtctatatg                   >  2:2011890/1‑92
                                                                                        CTGCCGATTAGCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGGATGCAATGAC                   >  2:3723109/1‑99
                                                                                         TGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACA                  <  1:3231291/100‑1
                                                                                         TGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACA                  <  2:928235/100‑1
                                                                                           CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCTACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATACGCGGGTATCCATTGACA                  <  1:3588544/98‑1
                                                                                           CCGATTAGCCCCCCCCTTTCCTCTTTGTTTGCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATAGACTATAGGGGGGTATGCATTGACA                  <  1:4172348/98‑1
                                                                                             GATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATA              <  1:1821584/100‑1
                                                                                             GATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATA              <  2:549429/100‑1
                                                                                                     CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATCCTATAGGGGGGTATGCATTGACATATAGAATACC       >  2:2499826/1‑100
                                                                                                     CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACC       >  1:1599447/1‑100
                                                                                                      CCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCC      >  2:2319565/1‑100
                                                                                                       CCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCC     <  1:4122953/100‑1
                                                                                                        CCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCC    >  2:127946/1‑100
                                                                                                         CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC   <  1:2769047/100‑1
                                                                                                         CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC   <  2:722593/100‑1
                                                                                                           CTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCtt  >  1:2376390/1‑97
                                                                                                                                                                                                              
CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/380121‑380016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT  <  NC_000913/380012‑379915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.