New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	395086 =	146 (0.930)	22 (0.160)	11/160	NT	15.2%	coding (581/624 nt)	yaiV	putative transcriptional regulator
	?	NC_000913	395119 =	115 (0.820)					coding (614/624 nt)	yaiV	putative transcriptional regulator

TGGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/395193‑395086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgccttCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCGTC  >  NC_000913/395119‑395217                                                                                                                                                                                                                 TGGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAG                                                                                                             <  2:3048188/100‑1  GGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGT                                                                                                            <  2:1567268/100‑1   GCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGATGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAGACGGTTGATAGCGACCAGTT                                                                                                           >  1:3423634/1‑100    CATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTT                                                                                                          >  1:403808/1‑100     ATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAATGCAAACGGTTGATAGCGACCAGTTTG                                                                                                         <  1:189614/100‑1     ATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTG                                                                                                         <  2:1603835/100‑1      TCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGC                                                                                                        >  2:2213227/1‑100       CAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCC                                                                                                       <  1:705502/100‑1       CAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCC                                                                                                       <  1:3368541/100‑1        AATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCT                                                                                                      <  2:4020487/100‑1         ATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTT                                                                                                     <  1:975450/100‑1                     CCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGAGTAATACTCTGAAGTCAAGCGGTTGATAGCGATCTGTTTGCCTGCAGAGGATTAA                                                                                          >  2:2649239/1‑99                                                                       CTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTTAGAGTATTAATCAGGACACGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAG                                       >  1:1595862/1‑100                                                                        TCTGAAGGGAAACGGTTGATAGCGACCAGGAAGCCTTCAGAGTATTAATCAGGACGCGGGGATAACTAAAGGTTTCTTCCCGCTTAGCTCGGTCACCAGG                                      >  1:2628501/1‑100                                                                         CTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGT                                     >  2:3606775/1‑100                                                                          TGACGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCCACGGTTTATTCCCCCTTAGCTCGGTCACCAGCTC                                    >  1:661724/1‑100                                                                          TGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTC                                    >  2:3196103/1‑100                                                                          TGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTC                                    >  2:2110246/1‑100                                                                           GAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCA                                   >  1:3366456/1‑100                                                                           GAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCA                                   >  2:3049392/1‑100                                                                           GAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCA                                   >  2:3957684/1‑100                                                                           GAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGG                                      >  1:4224930/1‑97                                                                           GAAGGCAAACGGTTGATAGCGACCAGTTTGCCTTAAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCA                                   >  1:2187554/1‑100                                                                            AAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCAT                                  >  1:3800072/1‑100                                                                            AAGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCAT                                  >  2:40484/1‑100                                                                             nGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATT                                 >  1:982216/2‑100                                                                             AGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATT                                 >  2:1813114/1‑100                                                                             AGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATT                                 >  2:1447036/1‑100                                                                             AGGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATT                                 >  2:1482114/1‑100                                                                             AGGCAAACGGTTGATAGCGACAAGATTGCCTTCAGAGTATTAATCATGACGCGGGGATAACCAACGGTTTATTCCCGCCTAGCTCGGTCACCAGATCA                                   >  1:2047741/1‑98                                                                              GGCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACAAGGACATT                                 >  2:2359893/1‑99                                                                               GCAAACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGA                               >  1:1242828/1‑100                                                                                  AACGGTTGATAGCGACCAGTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGC                            >  1:817047/1‑100                                                                                                    GTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAA          <  2:3121960/100‑1                                                                                                    GTTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAA          >  2:1301407/1‑100                                                                                                     TTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAA         <  1:773960/100‑1                                                                                                     TTTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGATCATTGATGCCATCGTTCATATTTTTAAA         <  2:1169645/100‑1                                                                                                      TTGCGTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        <  2:465592/100‑1                                                                                                      TTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        <  2:1550982/100‑1                                                                                                      TTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        >  1:3570024/1‑100                                                                                                      TTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        <  1:319647/100‑1                                                                                                      TTGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        <  2:2408297/100‑1                                                                                                       TGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGC       >  2:3980279/1‑100                                                                                                       TGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGC       >  1:3897206/1‑100                                                                                                       TGCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAG        <  2:2442262/99‑1                                                                                                        GCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCG      <  2:1062001/100‑1                                                                                                        GCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCG      <  2:1433089/100‑1                                                                                                        GCCTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCG      >  2:3273295/1‑100                                                                                                         caaTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGC       <  1:211618/95‑1                                                                                                          CTTCAGGGTATTAATCAGGACGCGGGGATAGCCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCG    <  1:1788269/100‑1                                                                                                          CTTCAGAGTATTAATCAGTACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGGTCATATTTTTAAAGCGCG    <  1:898963/100‑1                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCCTCGCTCATATTTTTAAAGCGC     >  1:4356198/1‑99                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCG    <  2:1487382/100‑1                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCG    <  2:3611628/100‑1                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCG    <  2:263252/100‑1                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCG    <  2:1037199/100‑1                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGC     >  1:3702532/1‑99                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGC     >  1:3785880/1‑99                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCG      >  1:1669806/1‑98                                                                                                          CTTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGACACCAGGACATTGATGCCATCGCTCATATTTTTAAAGC       >  1:3609110/1‑97                                                                                                           TTCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCGT   >  2:4227000/1‑100                                                                                                            TCAGAGTATTAATCAGGGCGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCGT   <  2:397774/99‑1                                                                                                            TCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCGTC  >  2:2820862/1‑100                                                                                                                                                                                                                 TGGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGATTAATACTCTGAAGGCAAACGGTTGATAGCGACCAGTTTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/395193‑395086 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgccttCAGAGTATTAATCAGGACGCGGGGATAACCAACGGTTTATTCCCGCTTAGCTCGGTCACCAGGTCATTGATGCCATCGCTCATATTTTTAAAGCGCGTC  >  NC_000913/395119‑395217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.