New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393130 =NA (NA)18 (0.120) 9/170 NT NA intergenic (‑89/+75) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 2393163 = NA (NA)noncoding (33/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 186 total aligned reads displayed.

GGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGC  >  NC_000913/2393031‑2393228
                                                                                                   |                                                                                                  
ggTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgt                                                                                                    >  2:1793154/1‑100 (MQ=255)
 gtagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgtg                                                                                                   <  2:294415/100‑1 (MQ=255)
   agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTc                                                                                                 <  1:1315004/100‑1 (MQ=255)
      aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGa                                                                                              <  2:1551513/100‑1 (MQ=255)
       aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                                             <  1:3122051/100‑1 (MQ=255)
        cATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                                             <  2:1399812/99‑1 (MQ=255)
           ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                         >  1:3016632/1‑100 (MQ=255)
            gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                                        <  2:1864622/100‑1 (MQ=255)
            gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                                        >  1:2803824/1‑100 (MQ=255)
               aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                                                                     <  2:2751418/100‑1 (MQ=255)
                  tttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAg                                                                                  <  2:3306432/100‑1 (MQ=255)
                   ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                                 <  2:2833865/100‑1 (MQ=255)
                   ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                                 >  2:1681655/1‑100 (MQ=255)
                   ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                                 >  1:4032206/1‑100 (MQ=255)
                    tATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggc                                                                                <  2:4378218/100‑1 (MQ=255)
                     aTTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcg                                                                               <  1:929495/100‑1 (MQ=255)
                     aTTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcg                                                                               >  2:2652130/1‑100 (MQ=255)
                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                             <  1:2336457/100‑1 (MQ=255)
                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                             <  2:4032236/100‑1 (MQ=255)
                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTCGTGTCGGATGCACCGCGAAGGCGGCt                                                                            <  2:2693690/100‑1 (MQ=255)
                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                            >  1:109125/1‑100 (MQ=255)
                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                            >  2:2404954/1‑100 (MQ=255)
                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                            <  1:27677/100‑1 (MQ=255)
                         cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                                                           >  2:1627438/1‑100 (MQ=255)
                         cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                            >  1:352968/1‑99 (MQ=255)
                          ttGTAAAAGTCCCGTCAGGACCGGAGTTTCAACGAATTCTCACGACAGAAAATCCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTa                                                                          >  1:2642785/1‑100 (MQ=255)
                            tgctggcactgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATcc                                                                       >  2:4247903‑M1/72‑100 (MQ=255)
                            gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATc                                                                        >  1:1095192/1‑100 (MQ=255)
                              aaaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCg                                                                      >  1:2125668/1‑100 (MQ=255)
                               tggcactgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGAc                                                                    >  2:2181401‑M1/69‑100 (MQ=255)
                                ggcactgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                   >  2:3156805‑M1/68‑100 (MQ=255)
                                aaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAc                                                                    <  1:490706/100‑1 (MQ=255)
                                 aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                   <  2:2444438/100‑1 (MQ=255)
                                  cactgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTa                                                                 >  1:654874‑M1/66‑100 (MQ=255)
                                   actgttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTa                                                                 >  1:1695844‑M1/65‑100 (MQ=255)
                                      gttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                              >  2:1489044‑M1/62‑100 (MQ=255)
                                      gttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                              >  2:777934‑M1/62‑100 (MQ=255)
                                       tccgatctcGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                             <  2:1467930/92‑1 (MQ=255)
                                       gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                             >  1:3231418/1‑100 (MQ=255)
                                        tgatggtactgcgttgagttaaggattgtgggcttgcccctcggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                             >  2:1981896‑M1/60‑99 (MQ=255)
                                        tCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTc                                                            <  2:4320443/100‑1 (MQ=255)
                                         gatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                           >  1:567085‑M1/59‑100 (MQ=255)
                                         cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                           >  2:2959758/1‑100 (MQ=255)
                                           ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                         >  2:3373416/1‑100 (MQ=255)
                                           ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                         <  2:446541/100‑1 (MQ=255)
                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                        <  2:3943012/100‑1 (MQ=255)
                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                        <  1:696046/100‑1 (MQ=255)
                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                        <  1:15647/100‑1 (MQ=255)
                                              ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGCCTGGCGGCAGTGTCGGATGCACCGAGAAGGCGGCTTACCCGACCTACGTTCTTatat                                                      <  1:1466048/100‑1 (MQ=255)
                                              ccGGATTATCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                      >  2:2308969/1‑100 (MQ=255)
                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                     >  1:1649219/1‑100 (MQ=255)
                                                ggATTTTCAACGAATTCTAACGCCAGAAAGCTCTGTTCGGGCTGGTGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGGCCTACGTTCTTatat                                                      <  1:2242581/98‑1 (MQ=255)
                                                   ttttCGACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGTGTAGTGTCGGATGCCCCGCGAAGGCGCCTTATCCGACCTCCGTTCTTATATCCCCa                                                 >  1:368106/1‑100 (MQ=255)
                                                     ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                               <  2:1004041/100‑1 (MQ=255)
                                                     ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                               >  2:3761483/1‑100 (MQ=255)
                                                       cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                             >  1:1146322/1‑100 (MQ=255)
                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                            <  1:4314151/100‑1 (MQ=255)
                                                         aCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcccctgggca                                           <  2:408696/100‑8 (MQ=255)
                                                         aCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCa                                           >  1:2066263/1‑100 (MQ=255)
                                                         aCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCa                                           >  2:3594050/1‑100 (MQ=255)
                                                          cGAATTCTCACGACAGAAAATTCTCATCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCaa                                          >  1:555427/1‑100 (MQ=255)
                                                            aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                        <  1:1748966/100‑1 (MQ=255)
                                                            aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                        <  1:4152690/100‑1 (MQ=255)
                                                             aTTCTCTCGACAGAAAATCCGCTTCGTACTGGGGGTAGTGTCGGTTCCACCGCGAAGGAGGCTTATCCGTCCTACGTTCTTATGTGCCCAGGAGCAATcc                                       <  1:1345046/100‑1 (MQ=255)
                                                              ttCTCACTGCATAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                        <  1:2096867/98‑1 (MQ=255)
                                                               tctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTTTCCGACCTACGTTCTTATATGCCCAGGGGCAATCCca                                     <  1:2361214/100‑1 (MQ=255)
                                                                ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                    <  1:2854009/100‑1 (MQ=255)
                                                                 tcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcaca                                   >  1:4371755/1‑100 (MQ=255)
                                                                  cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                  <  1:2442255/100‑1 (MQ=255)
                                                                  cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                                  >  1:3182879/1‑100 (MQ=255)
                                                                   aCGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAAt                                 <  1:2675636/100‑1 (MQ=255)
                                                                    cGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATc                                >  1:3631608/1‑100 (MQ=255)
                                                                       naGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                             >  1:201175/2‑100 (MQ=255)
                                                                       cAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                             >  2:1976172/1‑100 (MQ=255)
                                                                       cAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                             >  2:699601/1‑100 (MQ=255)
                                                                        aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                            >  1:3780298/1‑100 (MQ=255)
                                                                        aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                            <  1:1738826/100‑1 (MQ=255)
                                                                         gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                           >  2:1754373/1‑100 (MQ=255)
                                                                         gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                           >  2:1123066/1‑100 (MQ=255)
                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                          <  1:182457/100‑1 (MQ=255)
                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                          <  2:2723446/100‑1 (MQ=255)
                                                                            aaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTc                        <  2:1778732/100‑1 (MQ=255)
                                                                               tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc                     >  2:615478/1‑100 (MQ=255)
                                                                                ctctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACg                    >  1:1053030/1‑100 (MQ=255)
                                                                                 tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTACATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                   <  1:976757/100‑1 (MQ=255)
                                                                                      ggACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAc              >  2:326550/1‑100 (MQ=255)
                                                                                       gACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAcc             <  2:2211370/100‑1 (MQ=255)
                                                                                        aCTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCa            <  1:2724831/100‑1 (MQ=255)
                                                                                          tGGGGGTAGGGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc          <  2:4216773/100‑1 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa         >  2:304966/1‑100 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa         <  1:3135112/100‑1 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa         >  1:3580812/1‑100 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa         >  1:889211/1‑100 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa         >  2:757037/1‑100 (MQ=255)
                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATACCACAATCCTTAACTCAACGCAGTACCATCa         >  2:3734774/1‑100 (MQ=255)
                                                                                            ggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCaa        >  1:675319/1‑100 (MQ=255)
                                                                                            ggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCaa        >  1:3709202/1‑100 (MQ=255)
                                                                                             gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc       >  2:3620845/1‑100 (MQ=255)
                                                                                             gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc       >  2:389510/1‑100 (MQ=255)
                                                                                                 agTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg   >  2:1196393‑M1/3‑100 (MQ=255)
                                                                                                   |                                                                                                  
GGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGC  >  NC_000913/2393031‑2393228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.