New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2798052 =NA (NA)14 (0.090) 7/174 NT NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913 2798084 = NA (NA)intergenic (+40/+7) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated

Only 100 of 188 total aligned reads displayed.

TGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797954‑2798151
                                                                                                  |                                                                                                   
tgttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACg                                                                                                    <  2:2552742/100‑1 (MQ=255)
 gttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGAc                                                                                                     >  2:3516448/1‑98 (MQ=255)
 gttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGc                                                                                                   >  2:655809/1‑100 (MQ=255)
 gttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGc                                                                                                   >  2:1629911/1‑100 (MQ=255)
  ttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGcc                                                                                                  <  2:307576/100‑1 (MQ=255)
  ttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGcc                                                                                                  <  2:2120751/100‑1 (MQ=255)
    ggTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCgg                                                                                                >  2:2638044/1‑100 (MQ=255)
    ggTGCCGGGTTACTGTTTGCAGGAATCAGCGGATTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCgg                                                                                                >  2:2347341/1‑100 (MQ=255)
      tGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGACAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAc                                                                                              <  2:3990630/100‑1 (MQ=255)
       gCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAcg                                                                                             <  2:408964/100‑1 (MQ=255)
         cGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAcgcg                                                                                           >  1:1645762/1‑100 (MQ=255)
          gggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACgcgc                                                                                          <  2:1156294/100‑1 (MQ=255)
          gggTTACTGTATGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATACGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACgcgc                                                                                          <  1:2899269/100‑1 (MQ=255)
           ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         <  1:3922830/100‑1 (MQ=255)
           ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         >  1:1043370/1‑100 (MQ=255)
            gTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGAAGTGGAACCAACGAGCTTGAGAAGCGACGACGGACGCGcc                                                                                         >  1:2174950/1‑99 (MQ=255)
              tACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTa                                                                                      <  2:1830895/100‑1 (MQ=255)
              tACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTa                                                                                      <  1:3284755/100‑1 (MQ=255)
                  gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  1:2888400/1‑100 (MQ=255)
                  gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  2:1040718/1‑100 (MQ=255)
                  gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGATGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagc                                                                                    >  2:2630505/1‑98 (MQ=255)
                   tttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcagc                                                                                 <  1:2376030/100‑1 (MQ=255)
                   tttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcagc                                                                                 >  1:3967445/1‑100 (MQ=255)
                    ttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCg                                                                                <  2:1465150/100‑1 (MQ=255)
                    ttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCg                                                                                <  1:2638029/100‑1 (MQ=255)
                     tGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGATGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               >  1:4140368/1‑100 (MQ=255)
                     tGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               >  2:4234159/1‑100 (MQ=255)
                      gCAGGAATCAGCGGTTTTTTTTTTTTTTCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  1:58749/1‑100 (MQ=255)
                      gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  2:2393368/1‑100 (MQ=255)
                      gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  1:1343663/1‑100 (MQ=255)
                       cAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACa                                                                             >  1:693464/1‑100 (MQ=255)
                         ggAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATc                                                                           >  2:2686341/1‑100 (MQ=255)
                          gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATcc                                                                          <  1:4246855/100‑1 (MQ=255)
                            acaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCgg                                                                        >  2:3006381‑M1/71‑100 (MQ=255)
                            acaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCgg                                                                        >  1:83783‑M1/71‑100 (MQ=255)
                            acaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCgg                                                                        >  2:3150105‑M1/71‑100 (MQ=255)
                            acaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCgg                                                                        >  1:785230‑M1/71‑100 (MQ=255)
                              cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGTCCTAGCAGCGACATCCGGcc                                                                      <  1:2686326/100‑1 (MQ=255)
                              accgaagccaattgctcaggcgctggcagcaggtaaatctctcgacgattccctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCGGc                                                                       >  1:361152‑M1/69‑99 (MQ=255)
                                gCGGTTTTTGTGGAATGGCAAGGTTGTTTGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  1:1124584/1‑100 (MQ=255)
                                gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:4258899/1‑100 (MQ=255)
                                 cGGTTTTTTTGGAGTGGCAAGGTTGTTAGATAAGATGGCTTGGAACAAACGAGCTTTAGAAGCGGCGCCAGCCGCGTCTTAGCAGCGACATCCGGCCTCa                                                                   <  1:1891931/100‑1 (MQ=255)
                                 cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   <  2:1533593/100‑1 (MQ=255)
                                   gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGt                                                                 <  1:1755330/100‑1 (MQ=255)
                                   agccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGt                                                                 >  2:2371795‑M1/64‑100 (MQ=255)
                                    tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                >  2:4151833/1‑100 (MQ=255)
                                    gccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                >  2:1215154‑M1/63‑100 (MQ=255)
                                       ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             >  1:314728/1‑100 (MQ=255)
                                        tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            <  2:158950/100‑1 (MQ=255)
                                        tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            >  2:1524598/1‑100 (MQ=255)
                                        tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            <  2:3520173/100‑1 (MQ=255)
                                        attgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                            >  1:1852875‑M1/59‑100 (MQ=255)
                                         gtgGAATGGCAAGGTTGTTAGATAAGATGCAGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAg                                                           <  1:3746788/100‑1 (MQ=255)
                                          tgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGa                                                          >  1:1299930‑M1/57‑100 (MQ=255)
                                           ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  1:3062553/1‑100 (MQ=255)
                                           ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  1:968222/1‑100 (MQ=255)
                                           ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  1:414527/1‑100 (MQ=255)
                                           ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  1:337473/1‑100 (MQ=255)
                                           gatctGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         <  2:374966/96‑1 (MQ=255)
                                             aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCa                                                       <  2:3441490/100‑1 (MQ=255)
                                                ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    >  1:65505/1‑100 (MQ=255)
                                                 ncAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  2:1502593/2‑100 (MQ=255)
                                                  cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  >  1:2506337/1‑100 (MQ=255)
                                                  cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  <  1:1624253/100‑1 (MQ=255)
                                                   aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTGATTAGATCAGGAAAt                                                 <  1:3773914/100‑1 (MQ=255)
                                                        tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            >  2:4326852/1‑100 (MQ=255)
                                                         gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                           >  1:2433088/1‑100 (MQ=255)
                                                          ttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgag                                          <  1:2392965/100‑1 (MQ=255)
                                                            aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagag                                        <  1:938315/100‑1 (MQ=255)
                                                             gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                       >  2:2491631/1‑100 (MQ=255)
                                                              aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAt                                      >  2:461264/1‑100 (MQ=255)
                                                               tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                     >  2:3302959/1‑100 (MQ=255)
                                                               tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                     >  1:1574551/1‑100 (MQ=255)
                                                                 aGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                   >  2:2741361/1‑100 (MQ=255)
                                                                  gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                  >  2:4359784/1‑100 (MQ=255)
                                                                   aTGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                 >  1:4288690/1‑100 (MQ=255)
                                                                      ccGTGGAACCAACGAGCTTGAGGAGCGACGCAGGACGCGCCCTAGCAGCGACATCCGCGCCCAGTAATTAGGTCAGGAAATCATCGAGAGATTTACCtt                               >  1:3490854/1‑99 (MQ=255)
                                                                        gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                            <  2:88294/100‑1 (MQ=255)
                                                                          ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                          <  1:1930030/100‑1 (MQ=255)
                                                                          ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                          <  2:1953074/100‑1 (MQ=255)
                                                                              ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcg                      >  2:1552260/1‑100 (MQ=255)
                                                                               cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                     >  1:3899959/1‑100 (MQ=255)
                                                                               cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGCAAATCGTCGCGAGATTTACCTTCTGCCAgc                       >  1:4058641/1‑98 (MQ=255)
                                                                                 aCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCt                   >  2:2588208/1‑100 (MQ=255)
                                                                                    aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                <  2:842496/100‑1 (MQ=255)
                                                                                     gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  2:692518/100‑1 (MQ=255)
                                                                                     gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               >  1:1958551/1‑100 (MQ=255)
                                                                                      cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTGATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              >  2:1244560/1‑100 (MQ=255)
                                                                                      cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              >  2:1126245/1‑100 (MQ=255)
                                                                                      cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              >  2:4074998/1‑100 (MQ=255)
                                                                                       ttGAGAAGCGACGCCGGACGCGCCCTAGCAGCTACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              >  1:1543335/1‑99 (MQ=255)
                                                                                       ttGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa             >  2:1660624/1‑100 (MQ=255)
                                                                                        tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt            >  1:671385/1‑100 (MQ=255)
                                                                                          agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  1:1660617/100‑1 (MQ=255)
                                                                                          agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  1:1191992/100‑1 (MQ=255)
                                                                                          agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  2:942196/100‑1 (MQ=255)
                                                                                                 aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  2:3060960‑M1/99‑1 (MQ=255)
                                                                                                  cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  1:3193342/99‑1 (MQ=255)
                                                                                                  cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  >  2:2960593/1‑100 (MQ=255)
                                                                                                  cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  <  2:1726189/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797954‑2798151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.