| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4148478 | NA (NA) | 21 (0.150) | 13/164 | NT | NA | noncoding (49/82 nt) | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 4148511 | NA (NA) | noncoding (82/82 nt) | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 245 total aligned reads displayed.
GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG > NC_000913/4148379‑4148577 | aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGg < 2:161530‑M1/100‑2 (MQ=255) gtgtGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccgg < 1:3001733‑M1/100‑6 (MQ=255) tgtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccgga > 2:644697‑M1/1‑94 (MQ=255) tgtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccgga < 1:4413569‑M1/100‑7 (MQ=255) gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggat < 2:2174303‑M1/100‑8 (MQ=255) cctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGa > 2:3155016‑M2/4‑100 (MQ=255) gAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGAcgc < 1:645239/100‑1 (MQ=255) gAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCAGATGTCGCGTAAACGCCTTATCAAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGAcgc > 2:652886/1‑100 (MQ=255) agaggAGTTCGATGTAAACAATGCTGCAGTTGTATTGCCGGATGTGGCGAAATCGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGAcgcg < 2:126015/97‑1 (MQ=38) gggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTc < 1:1663878/100‑1 (MQ=255) gAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCaa < 1:1140179/100‑1 (MQ=255) aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg < 2:864768/100‑1 (MQ=255) gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc > 1:2300587/1‑100 (MQ=255) ttCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCg < 1:4215823/100‑1 (MQ=255) tCGATGTAAACATTGCGGCAGTTGTATGGCCGTATGTGGCGTTAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCTGGATAAGACGCGTCaatagt > 1:694467/1‑96 (MQ=38) cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc > 2:2771017/1‑100 (MQ=255) cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc > 1:854506/1‑100 (MQ=255) gATGTAAACATTGCGGCAGTTGTATTGTCTGATTTGGCGTAGACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg < 1:766630/100‑1 (MQ=39) gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg < 2:3198634/100‑1 (MQ=255) gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg < 2:3487888/100‑1 (MQ=255) atgtatgtaTTGGGGCAGTTGTATTGCCGTATGTGTCTTTATCTCCTTGTTCAGTCTAC‑‑‑‑‑TTCCGCGTTCTGTAGGCCGAATAAGACTCGTCAAGcn < 1:2413379/88‑2 (MQ=255) aTGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGc > 1:3282322/1‑100 (MQ=255) aTGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGc < 2:4229971/100‑1 (MQ=255) tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA < 2:1847821‑M2/100‑1 (MQ=255) tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA > 2:1692488‑M2/1‑100 (MQ=255) tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC < 2:2352041‑M2/100‑1 (MQ=255) tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC < 2:3657005‑M2/100‑1 (MQ=255) aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatcc < 1:2067723‑M1/100‑31 (MQ=255) aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC < 2:1734505‑M2/100‑1 (MQ=255) aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC < 2:2408978‑M2/100‑1 (MQ=255) aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg < 1:3139270‑M1/100‑32 (MQ=255) aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg < 2:4129061‑M1/100‑32 (MQ=255) cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggc < 2:4298692‑M1/100‑34 (MQ=255) cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGC < 2:1474135‑M2/100‑1 (MQ=255) aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc < 1:226706‑M1/100‑35 (MQ=255) ttGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcct < 2:2764017‑M1/100‑36 (MQ=255) tGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggccta < 2:4258849‑M1/100‑37 (MQ=255) gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt > 1:3182052/1‑100 (MQ=255) ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcctacag < 2:125939‑M1/100‑40 (MQ=255) ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg > 2:3286154/1‑100 (MQ=255) ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg < 2:3955019/100‑1 (MQ=255) cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcg > 1:1430756/1‑100 (MQ=255) cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc > 2:2348211/1‑99 (MQ=255) aGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcgc > 1:3432519/1‑100 (MQ=255) gTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcctacagatcg < 1:2632913‑M1/100‑44 (MQ=255) tggaTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTGC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg < 1:1308720/97‑1 (MQ=255) tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg > 2:1788587/1‑100 (MQ=255) tGTATTGCCGGATGTGGCGTAAACGCCTGATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg < 1:3828877/100‑1 (MQ=255) gTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCGGGCAAATAGCGCCTgg > 1:2574760/1‑100 (MQ=255) gTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTgg > 1:535978/1‑100 (MQ=255) gTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTgg > 2:1202411/1‑100 (MQ=255) tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggc < 2:1156165‑M1/100‑48 (MQ=255) tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGc < 2:2574773/100‑1 (MQ=255) ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg < 2:842642/100‑1 (MQ=255) ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTTCGCAGCAATCTGTAGGCCGGATAAGATGCGTC‑AGCATCGCATCCGGCaaaaatccttaa > 2:1989559/1‑91 (MQ=25) gCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt > 1:1816865/1‑100 (MQ=255) gCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt < 2:3826373/100‑1 (MQ=255) gCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt > 1:1154606/1‑100 (MQ=255) gCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt < 1:2760697/100‑1 (MQ=255) tgtgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc < 2:2642815/100‑1 (MQ=255) tgtgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc < 1:374958/100‑1 (MQ=255) tccgtcGTCAACGCCTTACCCAGCCTGA‑‑‑‑‑TGCCGCGTTGGGTGGGCCAGATAAGACGCGGCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAAtt < 1:755174/93‑1 (MQ=16) gtgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACt < 2:2953632/100‑1 (MQ=255) gtgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACt > 1:3784453/1‑100 (MQ=255) gtgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACt < 1:4348628/100‑1 (MQ=255) cttcgatctaCGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc < 2:3888931/90‑1 (MQ=255) tgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg < 1:3531389/100‑1 (MQ=255) tgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg < 1:3559389/100‑1 (MQ=255) tgGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg < 2:4062326/100‑1 (MQ=255) ggCGTAAACGCCTTATCCAGCCTAG‑‑‑‑‑CGCCGCGATCTGTAGGCCGTATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg < 1:1235434/99‑1 (MQ=255) gCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAt < 2:4148144/100‑1 (MQ=255) cGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAtt > 1:2289271/1‑100 (MQ=255) cGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAtt > 2:1702061/1‑100 (MQ=255) gTAAACGGCGTATTCAGCCTAC‑‑‑‑‑CGCCGCGATTTGTATGCAGGACAAGAGGGGTCATGTGTCGCATAAGACAAATAGCGACTGGCTGATAATTACTGa > 1:635609/1‑97 (MQ=255) tAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc < 2:3367929/100‑1 (MQ=255) cttccgatcttCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATATGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc < 1:2812691/90‑1 (MQ=38) aCGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa < 1:3454663/100‑1 (MQ=255) aCGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACAGAtcggaag > 1:3888902/1‑94 (MQ=255) cGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa > 1:4078519/1‑99 (MQ=255) gCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc > 1:2134487/1‑100 (MQ=255) ccTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt > 2:575112/1‑100 (MQ=255) tATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt > 2:112539/1‑100 (MQ=255) aTCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATc < 2:3716397/100‑1 (MQ=255) cAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGcc < 2:428676/100‑1 (MQ=255) aGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCa < 2:463990/100‑1 (MQ=255) gCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt > 2:3341917/1‑100 (MQ=255) gCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt > 2:2852586/1‑100 (MQ=255) cTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAg > 2:69517/1‑100 (MQ=255) c‑‑‑‑‑cgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATCGGGc > 1:1977377/1‑100 (MQ=255) cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg < 2:1533128/100‑1 (MQ=255) cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg > 2:2285285/1‑100 (MQ=255) gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgt > 2:3025688/1‑100 (MQ=255) cgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtg < 2:448752/100‑1 (MQ=255) aTCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTc > 1:3848290/1‑100 (MQ=255) tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg < 2:2146140/100‑1 (MQ=255) cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt > 1:978223/1‑100 (MQ=255) tGTAGGCCGGATAAGACGCGTCAAGTGTCGCCTCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt < 1:566423/99‑1 (MQ=255) gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTaa > 1:2933368/1‑100 (MQ=255) gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTaa > 1:1035736/1‑100 (MQ=255) aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc > 1:1896009/1‑100 (MQ=255) | GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAC‑‑‑‑‑CGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG > NC_000913/4148379‑4148577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |