New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4460417 =NA (NA)22 (0.150) 11/168 NT NA noncoding (3/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4460445 = NA (NA)noncoding (31/84 nt) REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences REP338 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 245 total aligned reads displayed.

CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGT  >  NC_000913/4460318‑4460516
                                                                                                   |                                                                                                   
ccGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGcc                                                                                                     >  2:890602/1‑100 (MQ=255)
 gggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCt                                                                                                    >  2:2960829‑M1/99‑100 (MQ=255)
  ggggCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTg                                                                                                   >  2:184129/1‑100 (MQ=255)
  ggaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccagcctacatttggcaattgctccaggtCTg                                                                                                   <  1:560452‑M1/3‑1 (MQ=255)
  cgggCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTg                                                                                                   <  1:3923/99‑1 (MQ=255)
   gaatgggcagataggttaatcttcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGa                                                                                                  >  1:3354507‑M1/97‑100 (MQ=255)
       cGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGc                                                                                               >  1:2026927/1‑99 (MQ=255)
       cGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCg                                                                                              <  2:3403150/100‑1 (MQ=255)
       cGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCg                                                                                              >  1:2912595/1‑100 (MQ=255)
        gTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGa                                                                                             >  2:2349290/1‑100 (MQ=255)
            aCGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCt                                                                                         >  1:1338967/1‑100 (MQ=255)
             cGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTg                                                                                        >  2:2602878/1‑100 (MQ=255)
             cGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTg                                                                                        >  1:356752/1‑100 (MQ=255)
              gATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGt                                                                                       <  2:1799857/100‑1 (MQ=255)
               aTGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTc                                                                                      <  1:3245879/100‑1 (MQ=255)
                tGTCGACAGTATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcg                                                                                     <  1:771985/100‑1 (MQ=255)
                  tCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgcg                                                                                   <  2:807489/100‑1 (MQ=255)
                  tCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTcgcg                                                                                   <  2:3194602/100‑1 (MQ=255)
                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  >  1:4335103/1‑100 (MQ=255)
                   cGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGt                                                                                  >  2:3487865/1‑100 (MQ=255)
                    gACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTc                                                                                 >  2:1141581/1‑100 (MQ=255)
                     aCAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCt                                                                                <  1:1013174/100‑1 (MQ=255)
                        ggATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTAt                                                                             <  1:2158460/100‑1 (MQ=255)
                         tcactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATc                                                                            >  1:505038‑M1/75‑100 (MQ=255)
                         gATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                            >  2:2020638/1‑100 (MQ=255)
                          cactctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCa                                                                           >  2:3942846‑M1/74‑100 (MQ=255)
                          aTAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATc                                                                            <  2:2643005/99‑1 (MQ=255)
                           tAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAg                                                                          <  2:3569190/100‑1 (MQ=255)
                           actctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAg                                                                          >  1:339268‑M1/73‑100 (MQ=255)
                             tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTatcaaac                                                                        >  2:2780524‑M1/71‑97 (MQ=255)
                             tctgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGAc                                                                        >  2:2880287‑M1/71‑100 (MQ=255)
                               tgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                      >  2:3968233‑M1/69‑100 (MQ=255)
                               tgagctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCt                                                                      >  1:4061952‑M1/69‑100 (MQ=255)
                                  gctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGa                                                                   >  1:1841138‑M1/66‑100 (MQ=255)
                                   ctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                  >  1:2811707‑M1/65‑100 (MQ=255)
                                   ctaagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAg                                                                  >  2:2041083‑M1/65‑100 (MQ=255)
                                    tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                 <  2:1729346/100‑1 (MQ=255)
                                    tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                 <  1:2372923/100‑1 (MQ=255)
                                    tgatAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                 >  2:2850332/1‑100 (MQ=255)
                                    taagcaaatgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGc                                                                 >  2:3776541‑M1/64‑100 (MQ=255)
                                       tAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCact                                                              >  1:1750406/1‑98 (MQ=255)
                                        aaTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAAtt                                                             <  1:633125/100‑1 (MQ=255)
                                         aTTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTg                                                            <  2:3646498/100‑1 (MQ=255)
                                          ttCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGc                                                           >  2:1283720/1‑100 (MQ=255)
                                           tCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTg                                                            >  2:2700628/1‑98 (MQ=255)
                                           atgccggatgcggcgtaaacgccttatccggcctacatttggcaattgctccaggtCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGcc                                                          >  1:1188604‑M1/57‑100 (MQ=255)
                                            cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                         <  1:3954614/100‑1 (MQ=255)
                                            cATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCa                                                         <  1:4179564/100‑1 (MQ=255)
                                             attattTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCaa                                                        >  1:1275618/1‑100 (MQ=255)
                                              ttattTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCaaa                                                       <  2:3831361/100‑1 (MQ=255)
                                                  ttCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTa                                                   <  1:960024/100‑1 (MQ=255)
                                                   tCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAg                                                  >  1:1926092/1‑100 (MQ=255)
                                                   tCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAg                                                  <  1:4084404/100‑1 (MQ=255)
                                                    cGCCTGGCTTATCAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGCAgc                                                 <  1:1265966/100‑2 (MQ=255)
                                                      ccTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCaaaagatcgga                                               >  1:4284304/1‑92 (MQ=255)
                                                      ccTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGcc                                               >  2:442048/1‑100 (MQ=255)
                                                        tGGCTTATCAGTCTGCGTGTAGGTTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCg                                              <  2:2941903/99‑1 (MQ=255)
                                                        tGGCTTATCAGTCCGCGTGTAGTCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGcc                                               <  1:3825294/98‑1 (MQ=255)
                                                         ggCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGa                                            >  2:2168019/1‑100 (MQ=255)
                                                           cTTATCAGTCCGCGGGTAGGCTGCATCCCGCAATTAATGCCTGATGCGACGCTGTCGCGTCTTATCATCCCTGCAGCAATTGCCAAATGTAGGCCCGAt                                           <  1:3553905/99‑1 (MQ=21)
                                                            ttATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATaa                                         <  1:3889527/100‑1 (MQ=255)
                                                             tATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAg                                        <  2:3272993/100‑1 (MQ=255)
                                                                cAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCg                                     <  2:3918173/100‑1 (MQ=255)
                                                                  gTCCGCGTGTAGGCTGCATCCGGTAATCATTGCCGGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtt                                   <  2:1569262/100‑1 (MQ=255)
                                                                  gTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGtt                                   <  2:2753083/100‑1 (MQ=255)
                                                                     cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                >  2:175743/1‑100 (MQ=255)
                                                                     cgcgTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAc                                >  2:4175777/1‑100 (MQ=255)
                                                                        gtgtAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTAcgcc                             <  1:3593345/100‑1 (MQ=255)
                                                                             ggCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATc                        <  2:459821/100‑1 (MQ=255)
                                                                              gCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGTCCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAAcgccttctcn                       <  1:4376505/100‑7 (MQ=21)
                                                                              gCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAAcgccttatcc                       <  2:1963432/100‑7 (MQ=25)
                                                                                tGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCgg                     <  2:132276/100‑1 (MQ=21)
                                                                                 gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                    <  2:2520867/100‑1 (MQ=21)
                                                                                 gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                    <  2:120253/100‑1 (MQ=21)
                                                                                 gCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                    >  2:1069272/1‑100 (MQ=255)
                                                                                  cATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                    >  1:883820/1‑99 (MQ=21)
                                                                                   aTCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTATGCCGGATGCGGCGTAAACGCCTTATCCGGcct                  <  2:2389583/100‑3 (MQ=18)
                                                                                    tCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAtt                 >  1:3606374/1‑100 (MQ=255)
                                                                                    tCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAtt                 >  2:719857/1‑100 (MQ=255)
                                                                                     ccGGTAATCAATGGCTGATGCGACGCTGTCGCGTCTTATCAGCCCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcctac                <  1:3103158/100‑5 (MQ=21)
                                                                                      cGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTg               >  2:2433401/1‑100 (MQ=255)
                                                                                      cGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTg               >  2:1448635/1‑100 (MQ=255)
                                                                                       ggTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGc              >  1:321325/1‑100 (MQ=255)
                                                                                        gTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCt             >  1:1511202/1‑100 (MQ=255)
                                                                                        gTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCt             >  1:3013617/1‑100 (MQ=255)
                                                                                        gTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCt             >  1:2309677/1‑100 (MQ=255)
                                                                                         tAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCtt            <  1:2860660/100‑1 (MQ=255)
                                                                                          aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa           >  2:4212640/1‑100 (MQ=255)
                                                                                          aaTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTa           >  2:3575553/1‑100 (MQ=255)
                                                                                           aTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGcctacatttgg          <  1:930969/100‑11 (MQ=21)
                                                                                           aTCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAg          <  1:2621048/100‑1 (MQ=255)
                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc         >  1:2112540/1‑100 (MQ=255)
                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc         <  2:1836720/100‑1 (MQ=255)
                                                                                            tCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGc         >  2:668321/1‑100 (MQ=255)
                                                                                            acAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGTAGCAATTTCCAAAGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAg          >  1:3679611/2‑99 (MQ=255)
                                                                                             cAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGGGCTTAg          >  1:2567932/1‑98 (MQ=255)
                                                                                               aTGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCa      <  2:3606399/100‑1 (MQ=255)
                                                                                                tGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCag     >  2:1021948/1‑100 (MQ=255)
                                                                                                 gCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga    >  2:2149639/1‑100 (MQ=255)
                                                                                                 gCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGACCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCaga    >  2:3342777/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CCGGGGCCGTTGACGATGTCGACAGGATAGTACTGATGATAATTCATTATTTCGCCTGGCTTATCAGTCCGCGTGTAGGCTGCATCCGGTAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGACCTGGAGCAATTGCCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGCTTAGCTCAGAGT  >  NC_000913/4460318‑4460516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.