New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4607047182 (1.160)11 (0.070) 9/168 NT 6.0% coding (654/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
?NC_000913 = 4607088 175 (1.180)coding (613/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

Only 100 of 229 total aligned reads displayed.

GGCAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGG  >  NC_000913/4606948‑4607146
                                                                                                   |                                                                                                    
 gCAACGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGCGAGACGAATTTTCGGC                                                                                                      <  1:3803877‑M1/99‑1 (MQ=255)
    aaGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAAt                                                                                                  <  1:1485485/100‑1 (MQ=255)
     aGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATg                                                                                                 <  2:870605/100‑1 (MQ=255)
          tCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGgcgcg                                                                                            >  2:4159134/1‑100 (MQ=255)
          tCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGgcgcg                                                                                            <  2:1742408/100‑1 (MQ=255)
            aCCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCa                                                                                          >  1:2954496/1‑100 (MQ=255)
             ccTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCaa                                                                                         >  2:770321/1‑100 (MQ=255)
                 cAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGc                                                                                     <  2:1882678/100‑1 (MQ=255)
                 cAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGc                                                                                     <  1:3131387/100‑1 (MQ=255)
                 cAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGc                                                                                     <  1:519236/100‑1 (MQ=255)
                  aaCACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCa                                                                                    >  1:1729785/1‑100 (MQ=255)
                     acCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACt                                                                                 >  1:2001862/1‑100 (MQ=255)
                        gTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGaa                                                                              >  2:4386932/1‑100 (MQ=255)
                         ttGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGaaa                                                                             <  2:906698/100‑1 (MQ=255)
                           ggCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGc                                                                           >  1:2457787/1‑100 (MQ=255)
                             ccGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCAc                                                                         >  1:586255/1‑100 (MQ=255)
                              cGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACg                                                                        <  2:3031862/100‑1 (MQ=255)
                                cAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGcc                                                                      <  2:1469428/100‑1 (MQ=255)
                                 aaGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGccc                                                                     >  2:315380/1‑100 (MQ=255)
                                      ttGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGcc                                                                <  1:3531840/100‑1 (MQ=255)
                                      ttGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGcc                                                                <  2:2194/100‑1 (MQ=255)
                                      ttGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGcc                                                                >  2:2457987/1‑100 (MQ=255)
                                       tGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCca                                                               >  1:23983/1‑100 (MQ=255)
                                       tGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCca                                                               >  2:2766658/1‑100 (MQ=255)
                                       tGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCca                                                               <  1:1697322/100‑1 (MQ=255)
                                         cgcgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCcaca                                                            <  2:2860914/100‑1 (MQ=255)
                                           cgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgc                                                          >  1:3990016‑M2/1‑98 (MQ=255)
                                            ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgcc                                                         >  2:2378040‑M2/1‑97 (MQ=255)
                                             gctggctTTTACCGCGGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                        >  1:4016373‑M2/1‑96 (MQ=255)
                                             gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgcc                                                         >  1:1082236‑M2/1‑96 (MQ=255)
                                              ctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccga                                                       >  2:3672832‑M2/1‑95 (MQ=255)
                                               tggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGAc                                                      >  2:583167/1‑100 (MQ=255)
                                               tggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGAc                                                      <  2:1995820/100‑1 (MQ=255)
                                                 gctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACAt                                                    >  2:3732527/1‑100 (MQ=255)
                                                  ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaat                                                    <  2:3537900‑M1/100‑51 (MQ=255)
                                                  ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                   >  1:1778898/1‑100 (MQ=255)
                                                  ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                   >  2:1583942/1‑100 (MQ=255)
                                                  ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                   <  1:665561/100‑1 (MQ=255)
                                                   ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                  <  1:1019583/100‑1 (MQ=255)
                                                   ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                  <  2:790504/100‑1 (MQ=255)
                                                   ttCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                  <  1:3942079/100‑1 (MQ=255)
                                                    tCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCa                                                 <  1:339331/100‑1 (MQ=255)
                                                    tCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCa                                                 <  1:1528940/100‑1 (MQ=255)
                                                     cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcg                                                 <  1:626263‑M1/100‑54 (MQ=255)
                                                     cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                >  1:1231227/1‑100 (MQ=255)
                                                      tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAACGCACGCCCGCGCCACAGCCGACATCCAGc                                               >  1:1402704/1‑100 (MQ=255)
                                                      tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                               <  2:3178693/100‑1 (MQ=255)
                                                      tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                               >  2:1381940/1‑100 (MQ=255)
                                                      tACCGCCGGCGCCGCCACACCACACAACGTGAGACGAATTTTCGGCGAATGGTGCGCTAATGCAACTGGAAGCACGCCGGCGCGTGAGCGGACAttc                                                  >  1:4127057/1‑95 (MQ=255)
                                                       aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                               >  1:4234444/1‑99 (MQ=255)
                                                       aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                              >  2:4148142/1‑100 (MQ=255)
                                                       aCCGCCGGAGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                              >  2:4308380/1‑100 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             >  1:2047643/1‑100 (MQ=255)
                                                        ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                             >  2:2631570/1‑100 (MQ=255)
                                                             ggggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAc                                        <  2:404802/100‑1 (MQ=255)
                                                               ggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCt                                      >  2:2445733/1‑100 (MQ=255)
                                                               ggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCt                                      <  1:1318206/100‑1 (MQ=255)
                                                                 cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                    >  2:1106419/1‑100 (MQ=255)
                                                                 cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                    >  1:2383121/1‑100 (MQ=255)
                                                                   gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                  >  1:4290363/1‑100 (MQ=255)
                                                                   gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                  <  2:1018277/100‑1 (MQ=255)
                                                                   gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                  <  1:3173134/100‑1 (MQ=255)
                                                                    agaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgt                                 >  2:3559581/1‑100 (MQ=255)
                                                                    agaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgt                                 >  2:3270505/1‑100 (MQ=255)
                                                                     naCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                >  1:441023/2‑100 (MQ=255)
                                                                     gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAATGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                <  1:3354767/100‑1 (MQ=255)
                                                                     gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                <  1:390902/100‑1 (MQ=255)
                                                                       cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAAATGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                              >  1:2908560/1‑100 (MQ=255)
                                                                        aTCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGc                             <  1:2603976/100‑1 (MQ=255)
                                                                         tCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCg                            >  1:3029100/1‑100 (MQ=255)
                                                                            cacaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCAGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCggcg                         >  1:2195545/1‑98 (MQ=255)
                                                                             acaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGt                        <  2:2050568/100‑1 (MQ=255)
                                                                              caAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGtt                       <  2:1231231/100‑1 (MQ=255)
                                                                              caAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGtt                       <  2:1251422/100‑1 (MQ=255)
                                                                                 ggTGAGACGAATTTTCGTCTTATTTTGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGGGGTAAc                    >  1:872093/1‑100 (MQ=255)
                                                                                 ggTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAAc                    <  1:574439/100‑1 (MQ=255)
                                                                                  gTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACg                   <  2:1184138/100‑1 (MQ=255)
                                                                                   tGAGACGAATTTTCGGCGAATGGCGCGCCAAGGCCACTGACAGCACGACAGCGCCACAGCCGAAACCCAAAACTTTACCTTTCGCGCGCGGAGTAAAcct                  <  1:2570868/100‑3 (MQ=255)
                                                                                   tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCACGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGGTAACGt                  >  2:4314350/1‑100 (MQ=255)
                                                                                     agaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCg                <  2:1518241/100‑1 (MQ=255)
                                                                                      gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattagtctcaccttgtgcgatgtctctgccccggcggt               <  2:4335251‑M2/100‑46 (MQ=255)
                                                                                      gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga               >  1:2644049/1‑100 (MQ=255)
                                                                                       aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTATCGTCgag              <  2:2314229/100‑1 (MQ=255)
                                                                                       aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag              <  2:4215973/100‑1 (MQ=255)
                                                                                        cGAATTTTCGGCTAATGCCGCACAAAGGCAACTGAAGGCACGCCGGCGCCACAGCCGACATCAAGCACTATACCTTTCGTGTGCGGAGTTAACg                   >  1:3072299/1‑94 (MQ=255)
                                                                                        cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga             >  2:2364779/1‑100 (MQ=255)
                                                                                          aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagc           <  1:442223/100‑1 (MQ=255)
                                                                                           aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagca          <  2:717624/100‑1 (MQ=255)
                                                                                            ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag         <  1:3420527/100‑1 (MQ=255)
                                                                                             tttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagcc        <  1:2760413‑M2/100‑53 (MQ=255)
                                                                                              ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca       <  2:1635975/100‑1 (MQ=255)
                                                                                              ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca       >  2:3424144/1‑100 (MQ=255)
                                                                                              ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca       <  1:1197631/100‑1 (MQ=255)
                                                                                                cGGCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcgtctcaccttatgcgatgtatcttccccggcggtagaagccaac      >  1:745633‑M1/1‑4 (MQ=255)
                                                                                                cGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagc     <  2:369043‑M2/100‑56 (MQ=255)
                                                                                                 ggCtgtggcgcgggcgtgctttcagttgcctttgcgcgccattcgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc     >  1:496343‑M1/1‑3 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCATTCgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagc     <  1:991442‑M2/100‑56 (MQ=255)
                                                                                                 ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc    <  1:2923517‑M2/100‑57 (MQ=255)
                                                                                                  gCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTg   <  2:229844/100‑1 (MQ=255)
                                                                                                   cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg  >  2:2138153/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
GGCAAAGACTTCACCTTCAACACCGTTGGCCGCAAGTGTTGCGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGG  >  NC_000913/4606948‑4607146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.