New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 474269 =NA (NA)15 (0.100) 11/166 NT NA intergenic (+17/+32) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2
?NC_000913 474296 = NA (NA)intergenic (+44/+5) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 156 total aligned reads displayed.

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368
                                                                                                    |                                                                                                   
cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                     <  2:1051704/100‑1 (MQ=255)
  gTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAg                                                                                                   <  2:2104750/100‑1 (MQ=255)
     ggTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCg                                                                                                <  2:3524499/100‑1 (MQ=255)
         tGCGTAGACCGGAAGAGCAGAGCGGAGAAGGGCTGGATGTCAACCGCTAGGGCGAGAATGCCTATAACGCGTAATAAGCACTGCAAAAAACAGc                                                                                                  <  1:1786221/94‑1 (MQ=255)
          gCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACgg                                                                                           >  1:3374971/1‑100 (MQ=255)
          gCGGGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGagg                                                                                            >  2:1919053/1‑97 (MQ=255)
             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGttt                                                                                        >  2:3372431/1‑100 (MQ=255)
             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGttt                                                                                        >  2:1025575/1‑100 (MQ=255)
             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCAACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGttt                                                                                        <  1:1333041/100‑1 (MQ=255)
                 ccGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCan                                                                                    <  1:123659/100‑2 (MQ=255)
                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                   >  2:2823880/1‑100 (MQ=255)
                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  >  2:2837708/1‑100 (MQ=255)
                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                  >  2:2060569/1‑100 (MQ=255)
                    gAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTc                                                                                 >  2:1341222/1‑100 (MQ=255)
                      agagCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCg                                                                               <  2:3586893/100‑1 (MQ=255)
                       gaggaggagCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCgg                                                                              <  1:4084937/100‑1 (MQ=255)
                        agCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGc                                                                             >  1:4355974/1‑100 (MQ=255)
                           aGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAt                                                                          >  2:3435047/1‑100 (MQ=255)
                            ttatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaTAGCCGGACGGTTTTCACCTCCGGCTAt                                                                          >  1:1121776‑M1/73‑100 (MQ=255)
                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  1:2529177/1‑100 (MQ=255)
                            ggAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  2:841320/1‑100 (MQ=255)
                             tatacccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAtt                                                                         >  1:881513‑M1/72‑100 (MQ=255)
                              aGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttt                                                                       >  1:3053278/1‑100 (MQ=255)
                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  2:1512306/100‑1 (MQ=255)
                                 cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                     <  1:2476999‑M1/33‑1 (MQ=255)
                                  gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  2:2925769/1‑100 (MQ=255)
                                  ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  2:2477011‑M1/67‑100 (MQ=255)
                                  ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                    >  2:3764479‑M1/67‑100 (MQ=255)
                                   caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  2:2004956‑M1/66‑100 (MQ=255)
                                   caagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  1:4154767‑M1/66‑100 (MQ=255)
                                      gacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAtt                                                                >  2:913815‑M1/63‑100 (MQ=255)
                                       gggCTGGATGTCAACAGCCACGGCGAGAATGTCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               <  2:3822842/100‑1 (MQ=255)
                                       acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               >  1:146319‑M1/62‑100 (MQ=255)
                                       acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               <  1:2873328‑M1/39‑1 (MQ=255)
                                        acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                              >  2:2365454‑M1/61‑100 (MQ=255)
                                          cTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                            <  2:1254157/100‑1 (MQ=255)
                                             gATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTa                                                         <  1:3224639/100‑1 (MQ=255)
                                             gATGTCAACAGCCACGGCGACAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTa                                                         >  1:2705078/1‑100 (MQ=255)
                                               tGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACg                                                       <  2:4170204/100‑1 (MQ=255)
                                                 tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  2:2780172/1‑100 (MQ=255)
                                                 tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     <  2:677368/100‑1 (MQ=255)
                                                 tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  1:3241001/1‑100 (MQ=255)
                                                  cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGc                                                      >  1:2235115/1‑98 (MQ=255)
                                                  cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCAt                                                    >  2:1854276/1‑100 (MQ=255)
                                                  cAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCAt                                                    >  2:70882/1‑100 (MQ=255)
                                                   aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                   >  2:336407/1‑100 (MQ=255)
                                                      aGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcc                                                <  1:4110068/100‑1 (MQ=255)
                                                       gctaCGGCGATAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACTGTTTTCACCTCCGGCTATTTTTTTAATTGTAATTACGCATc                                                   >  1:2850985/4‑96 (MQ=255)
                                                       gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGTACGGTTTTCACCTCCGGCTATTTTTTTAATTGTTATTACGCATCAcc                                                >  1:3730709/1‑99 (MQ=255)
                                                       gCCACGGAGAGAATGCCTATAACGCGTAACAAGCACTGCCAAAAACAGCCGGACGGTTTTAACCTCAGGCTATTTTCTTAATTGTGATTACGCaccacc                                                >  1:4235730/1‑99 (MQ=255)
                                                         cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcccc                                              <  1:284685/99‑1 (MQ=255)
                                                         cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAcc                                                <  1:659249/97‑1 (MQ=255)
                                                         cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                             <  1:1477140/100‑1 (MQ=255)
                                                         cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTACGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                             >  2:1210757/1‑100 (MQ=255)
                                                           cagCGAGAATGCCAATAACGCGTAACAAGCAGTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTc                                           >  2:2974699/3‑100 (MQ=255)
                                                           cGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCtt                                            >  2:4129183/1‑99 (MQ=255)
                                                            ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  1:2060562/100‑1 (MQ=255)
                                                             gCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCt                                         <  2:2663820/100‑1 (MQ=255)
                                                                 gaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                     <  2:474267/100‑1 (MQ=255)
                                                                    tGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                   <  2:421235/99‑1 (MQ=255)
                                                                    tGCCTATAACGCGTAACAAGCACTGAAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                    <  1:1727673/97‑1 (MQ=255)
                                                                     gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGtn                                 <  2:3337025/100‑2 (MQ=255)
                                                                      ccTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                >  1:1550073/1‑100 (MQ=255)
                                                                       cTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGa                               >  2:2241988/1‑100 (MQ=255)
                                                                       cTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGa                               >  1:3939423/1‑100 (MQ=255)
                                                                        tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  2:4012269/100‑1 (MQ=255)
                                                                        tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  2:1178209/100‑1 (MQ=255)
                                                                         ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             >  2:621536/1‑100 (MQ=255)
                                                                         ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:2796036/100‑1 (MQ=255)
                                                                         ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:1720960/100‑1 (MQ=255)
                                                                         ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgc                             <  2:4345611/100‑2 (MQ=255)
                                                                         ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGAGTCAGCATCACCCCTTCCTGAACGGTCGAgg                             >  1:756999/1‑100 (MQ=255)
                                                                           aaCGCGTAACATGCACTGCAAAAAACAGCCGGACTGTTTTCAACTCCGGCTATTTTTTTAATTGTGATTACGAATCACCCCTTCCTGAACGGTCGAGGCa                           <  2:1524959/100‑1 (MQ=255)
                                                                            aCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCaa                          >  1:2764109/1‑100 (MQ=255)
                                                                             cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         >  1:2340956/1‑100 (MQ=255)
                                                                             cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         >  1:1067466/1‑100 (MQ=255)
                                                                             cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         >  2:3705121/1‑100 (MQ=255)
                                                                               cgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCa                       >  1:3366808/1‑100 (MQ=255)
                                                                                gTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAg                      <  1:2504548/100‑1 (MQ=255)
                                                                                 tAACAAGCACTGCAAAAAACAGCCGGACGGTATTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGt                     >  1:2155366/1‑100 (MQ=255)
                                                                                  aaCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTa                    >  2:1408103/1‑100 (MQ=255)
                                                                                    cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  >  1:501240/1‑100 (MQ=255)
                                                                                    cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  <  2:3624132/100‑1 (MQ=255)
                                                                                    cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  >  2:3977426/1‑100 (MQ=255)
                                                                                        cACTGCAAAAAACAGCCGGACGGTTTTCACCTTCGGCTACTTGTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGt              <  1:3090971/100‑1 (MQ=255)
                                                                                            gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          >  2:410325/1‑100 (MQ=255)
                                                                                            gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          >  1:3797745/1‑100 (MQ=255)
                                                                                             cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         >  1:1810845/1‑100 (MQ=255)
                                                                                             cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         <  2:501241/100‑1 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCTGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGACCGGTCGAGGCAACCAGTACGCCg               <  1:2667813‑M1/87‑1 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        <  2:246503‑M1/94‑1 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        <  1:630006‑M1/94‑1 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  1:858652‑M1/7‑100 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        <  2:2175057‑M1/94‑1 (MQ=255)
                                                                                              aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGGCTTgg         >  1:1749887‑M1/7‑99 (MQ=255)
                                                                                                aaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGta      >  1:2781762‑M1/5‑100 (MQ=255)
                                                                                                 aaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtat     <  2:54071‑M1/97‑1 (MQ=255)
                                                                                                  aaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGtata    >  2:4361880‑M1/3‑100 (MQ=255)
                                                                                                    cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  >  2:220171/1‑100 (MQ=255)
                                                                                                    cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  <  2:2348635/100‑1 (MQ=255)
                                                                                                    |                                                                                                   
CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.