New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2794028 =NA (NA)12 (0.080) 9/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 237 total aligned reads displayed.

AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158
                                                                                                   |                                                                                                   
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  2:2515586/1‑100 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  1:1677524/1‑100 (MQ=255)
   tCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    <  1:309003/98‑1 (MQ=255)
   cttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                                                  >  1:1869968‑M1/66‑100 (MQ=255)
   cttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                                                  >  2:4410132‑M1/66‑100 (MQ=255)
    ccGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACg                                                                                                 >  2:592971/1‑100 (MQ=255)
     tgTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                <  2:2372170/99‑1 (MQ=255)
     tcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  1:2802574‑M1/64‑100 (MQ=255)
     cGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  1:3386714/1‑100 (MQ=255)
     cGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  2:435064/1‑100 (MQ=255)
      gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               <  1:412926/100‑1 (MQ=255)
      gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  1:2372160/1‑99 (MQ=255)
      cctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccctatGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               >  1:1739447‑M1/63‑100 (MQ=255)
          ttcacgtacagattgtcggatgcggtgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                                                           >  1:1096424‑M1/59‑100 (MQ=255)
          gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                                                           <  1:1015575/100‑1 (MQ=255)
          gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                                                           >  1:3689774/1‑100 (MQ=255)
           tcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          >  1:490502‑M1/58‑100 (MQ=255)
            gTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCa                                                                                         <  1:1870355/100‑1 (MQ=255)
                ggAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTc                                                                                     >  1:4071344/1‑100 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:1572188/100‑1 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:1528864/100‑1 (MQ=255)
                     tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                                                <  1:195986/100‑1 (MQ=255)
                      catcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATaa                                                                               >  2:3664355/1‑100 (MQ=255)
                      catcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATaa                                                                               >  1:2636584/1‑100 (MQ=255)
                           gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          >  2:600099/1‑100 (MQ=255)
                           gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          >  1:491007/1‑100 (MQ=255)
                            ccAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAGAAGGCGtt                                                                         >  1:3897030/1‑100 (MQ=255)
                             cAGTGTTTTGATGAGGCGAGGCAGTAGCGCCGCTCCTATGCCGGAGGGGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGttt                                                                        <  1:2012425/100‑1 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  2:4121040/100‑1 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  1:133256/100‑1 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  2:4070426/100‑1 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  1:3252551/1‑100 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     >  2:3883924/1‑99 (MQ=255)
                                     tgatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCa                                                                >  2:2138723/1‑100 (MQ=255)
                                      gatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                                               >  2:2645953/1‑100 (MQ=255)
                                      gatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                                               >  1:804405/1‑100 (MQ=255)
                                       atgaGGCGAAGCAGTAGCGCCGGTCCTATGCCGGAGGAGAGGCTGCGGGTCGTGTCCGGCCTACGGGGATGCAGGTCGGATAAGGCGTTTACACCGCATc                                                              >  1:2347268/1‑100 (MQ=255)
                                       atgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATc                                                              >  2:4186052/1‑100 (MQ=255)
                                        tgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATcc                                                             <  1:535679/100‑1 (MQ=255)
                                        tgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATcc                                                             <  2:445371/100‑1 (MQ=255)
                                         gaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCg                                                            >  1:3216986/1‑100 (MQ=255)
                                          aGGCGAAGCTGTAGCGCCGCTCGTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGAGTCCAGAACGGATACGGCGTTTACGCCGCATCCGa                                                           >  1:4327296/1‑100 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  2:2005807/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  2:1455464/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  1:980192/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          >  1:119656/1‑100 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  1:1105289/100‑1 (MQ=255)
                                            gCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACa                                                         >  2:2673062/1‑100 (MQ=255)
                                              gAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATcccgtcaa                                                       >  1:3180524/1‑94 (MQ=255)
                                              gAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCAGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  1:2592289/100‑1 (MQ=255)
                                               aaGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  2:3963188/100‑1 (MQ=255)
                                               aaGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  1:1890059/100‑1 (MQ=255)
                                               aaGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  2:1450508/100‑1 (MQ=255)
                                                 gCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTg                                                    >  1:691466/1‑100 (MQ=255)
                                                 gCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTg                                                    >  1:2884003/1‑100 (MQ=255)
                                                  cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGt                                                   >  1:3874714/1‑100 (MQ=255)
                                                  cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCAGt                                                   <  1:649237/100‑1 (MQ=255)
                                                   aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                                                  >  2:128454/1‑100 (MQ=255)
                                                   aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGAGTTTACGCCGCATCCGACAATCTGTa                                                  <  2:2691938/100‑1 (MQ=255)
                                                    gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 <  2:3087618/100‑1 (MQ=255)
                                                      aGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGt                                               >  1:17567/1‑100 (MQ=255)
                                                      aGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGGTTACGCCGCATCCGACAATCTGTACGt                                               >  2:2341310/1‑100 (MQ=255)
                                                       gcgcCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTg                                              >  2:3234313/1‑100 (MQ=255)
                                                         gccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGaa                                            >  2:745426/1‑100 (MQ=255)
                                                          ccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAAc                                           >  2:3385623/1‑100 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  1:3020299/100‑1 (MQ=255)
                                                             cTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        <  2:888459/100‑1 (MQ=255)
                                                             cTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        <  1:2809088/100‑1 (MQ=255)
                                                              tCCTCTGCCGGAGGCGCCGCTGCGCGTCCTGTCCGGCCTACGTGTATCCCGGTCGGCTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        <  2:4220026/99‑1 (MQ=37)
                                                              tCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       <  1:3418494/100‑1 (MQ=255)
                                                              ccgtaggccggacaagacgcgcagcgtcgcctccggcATAGGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       >  2:1392943‑M2/38‑100 (MQ=255)
                                                               cgtaggccggacaagacgcgcagcgtcgcctccggcATACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa                                      >  2:1359552‑M2/37‑100 (MQ=255)
                                                               ccTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa                                      <  2:2823098/100‑1 (MQ=255)
                                                                   ggccggacaagacgcgcagcgtcgcctccggcCTCCGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCCGTCCGCGCACAGgacga                                    >  1:3424717‑M2/33‑98 (MQ=255)
                                                                    gccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt                                 >  2:316482‑M2/32‑100 (MQ=255)
                                                                     CCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATc                                <  1:865375‑M1/100‑1 (MQ=255)
                                                                     CCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATc                                >  1:3586962‑M1/1‑100 (MQ=255)
                                                                      CGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCt                               <  1:4164999‑M1/100‑1 (MQ=255)
                                                                       ggacaagacgcgcagcgtcttgtccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              >  1:4008672‑M2/29‑100 (MQ=255)
                                                                       GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  2:1987174‑M1/100‑1 (MQ=255)
                                                                          ggCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGt                           >  1:4181935/1‑100 (MQ=255)
                                                                            cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         <  2:378046/100‑1 (MQ=255)
                                                                                  tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                   >  1:968137/1‑100 (MQ=255)
                                                                                   gcgcGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                   <  2:1239161/99‑1 (MQ=255)
                                                                                   gcgcGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGt                  >  2:3244843/1‑100 (MQ=255)
                                                                                    cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                 >  2:1813877/1‑100 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              <  2:4312675/100‑1 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              <  2:1515058/100‑1 (MQ=255)
                                                                                        tCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGc             >  2:3549235/1‑100 (MQ=255)
                                                                                        tCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGc             >  1:1483071/1‑100 (MQ=255)
                                                                                        tCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGc             >  2:1176715/1‑100 (MQ=255)
                                                                                          ttGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCgg           <  1:2126468/100‑1 (MQ=255)
                                                                                           tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa          >  1:4371423/1‑100 (MQ=255)
                                                                                              ccggcCTACGGGGATCTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       <  2:2541996‑M2/95‑1 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       <  2:1734234‑M2/95‑1 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       >  2:2298226‑M2/6‑100 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     <  1:3978386‑M2/97‑1 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     >  2:683840‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     <  1:3756120‑M2/97‑1 (MQ=255)
                                                                                                   cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCTTCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAACCGctct  >  1:2366542/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.