| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3427251 | NA (NA) | 21 (0.140) | 6/168 | NT | 27.4% | noncoding (1512/1542 nt) | rrsD | 16S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 4209670 = | 59 (0.380) | noncoding (1524/1542 nt) | rrsE | 16S ribosomal RNA of rrnE operon | |||||
Only 100 of 108 total aligned reads displayed.
TGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTG > NC_000913/4209571‑4209769 | gtagaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctac < 2:3247443‑M2/1‑1 (MQ=255)gtagaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctac > 1:1807916‑M2/100‑100 (MQ=255)gtagaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaagtaaggaggtgatccaaccgcaggttcccctac < 1:1810848‑M2/1‑1 (MQ=255) tagaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCg < 2:1472221‑M2/2‑1 (MQ=255) tagaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCg < 2:2048817‑M2/2‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 1:374080‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 1:715854‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 1:797621‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 2:1349586‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 2:2498714‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 2:3855288‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCgg < 2:804772‑M2/3‑1 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCg > 1:2003281‑M2/98‑99 (MQ=255) agaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaagaggagatccaaccgcaggttcccctac > 1:1739319‑M2/98‑98 (MQ=255) gaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCGGt < 1:1106165‑M2/4‑1 (MQ=255) gaggttttactgctcattttcatcagacaatctgtgtgagcactgcaaagtacgcttctttaaggtaaggaggtgatccaaccgcaggttcccctaCGGt < 1:2650509‑M2/4‑1 (MQ=255) gAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGaa > 2:163306/1‑100 (MQ=31) aGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAg > 2:1661068/1‑100 (MQ=33) aGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAg > 2:3934067/1‑100 (MQ=33) aGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCAAACAGATTGTCTGATAGAAAg > 2:2866358/1‑100 (MQ=17) aGTCGGAACAAGGTAACCGTAGGGGAACGTGCGGTTGGATCACCTCCTTACCTTAAAGCAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAg < 1:2160134/100‑1 (MQ=255) gTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGt > 2:455531/1‑100 (MQ=33) gTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGt < 1:4371679/100‑1 (MQ=32) gTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGt < 1:1053182/100‑1 (MQ=32) cGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGa < 1:155691/100‑1 (MQ=32) cGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGa > 2:2136278/1‑100 (MQ=32) cGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGa > 1:3406249/1‑100 (MQ=33) gTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaa > 1:1478274/1‑100 (MQ=33) gTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaa > 1:3502450/1‑100 (MQ=33) gTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGATAGAAAGTGaa > 1:256044/1‑100 (MQ=17) tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa < 1:1033321/100‑1 (MQ=33) tAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaa > 1:1285693/1‑100 (MQ=32) aaCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGaaaa < 2:3485927/100‑1 (MQ=33) gtgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGGTTGTCTGATAGGAAGTGAAAAg > 1:4081760‑M2/25‑100 (MQ=255) gtgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCACACACAGATTGTCTGATAGGAAGTGAAAAg > 1:247945‑M2/25‑100 (MQ=255) aCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAg < 1:2959399/100‑1 (MQ=32) aCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAg > 1:2155009/1‑100 (MQ=32) aCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAg < 1:3934037/100‑1 (MQ=33) tgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGAT‑Gaaaatgagcagta > 1:3638668‑M2/24‑94 (MQ=255) tgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGAAGTGCTCACACAGATTGTCTGAT‑Gaaaatgagcagta > 2:672703‑M2/24‑94 (MQ=255) tgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTCCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc > 1:497929‑M2/24‑100 (MQ=255) tgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGc > 2:1180114‑M2/24‑100 (MQ=255) tgatccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGc > 2:3156957‑M2/24‑100 (MQ=255) caacctAACCGTTGTTGATCCTGCTGTTGTATTCCCTCCTTACCTGAAAGAAGCCGTCTTTGCAGTTCTCACGCTTATTGTCTGATAGAAAGCGAAAAg < 1:593498/94‑1 (MQ=2) aaGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCa < 2:1903890/100‑1 (MQ=33) atccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCaa > 1:3282732‑M2/22‑100 (MQ=255) aGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCaa > 2:1731832/1‑100 (MQ=32) aGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCaa > 2:179428/1‑100 (MQ=32) tccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAg > 2:2589832‑M2/21‑100 (MQ=255) tccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGGAAGTGAAAAGCAAg > 2:4377123‑M2/21‑100 (MQ=255) tccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGat‑gaaaatgagcagtaaaa > 2:3647253‑M2/21‑91 (MQ=255) tccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAg > 1:3959375‑M2/21‑100 (MQ=255) ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg > 2:3471177/1‑100 (MQ=33) ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg < 2:1063367/100‑1 (MQ=33) ggTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAg < 1:3270952/100‑1 (MQ=33) gTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg < 1:377857/100‑1 (MQ=32) gTAACCGTAGGGGAACCCGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg < 2:3124161/100‑1 (MQ=18) ccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGCTTGTCTGATAGAAAGTGAAAAGCAAg > 1:751456‑M2/20‑99 (MQ=255) ccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAgg > 2:1761724‑M2/20‑100 (MQ=255) ccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACACATTGTCTGATAGAAAGTGAAAAGCAAg > 1:806861‑M2/20‑99 (MQ=255) ccaaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAgg > 1:4018076‑M2/20‑100 (MQ=255) tAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc > 2:543198/1‑100 (MQ=33) tAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc < 1:763738/100‑1 (MQ=32) tAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGc > 1:451036/1‑100 (MQ=33) caaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGCAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAGGc > 1:3765291‑M2/19‑100 (MQ=255) aaccgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCg > 1:289048‑M2/18‑100 (MQ=255) aaCCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCg < 1:2385651/100‑1 (MQ=33) accgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGt > 1:469797‑M2/17‑100 (MQ=255) accgcaggttcccctaCGGTTGGATCACCTCCTTACCTTAAAGAACCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGCAAAGCAACGCGt > 1:469855‑M2/17‑100 (MQ=255) aCCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGt > 1:1124422/1‑100 (MQ=33) ccGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTc > 2:385070/1‑100 (MQ=33) ccGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTc < 2:1698999/100‑1 (MQ=33) ccGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTc < 1:1822483/100‑1 (MQ=33) cGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCt < 1:3176385/100‑1 (MQ=33) cGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTAAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCt > 2:3109353/1‑100 (MQ=18) gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCtt > 1:3362987/1‑100 (MQ=32) gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCtt > 2:688555/1‑100 (MQ=33) gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCtt > 2:495488/1‑100 (MQ=33) gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCtt < 1:543196/100‑1 (MQ=33) gTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACAAAGATTGTGTGATAGAAAGTGAAAAGCAAGGCGTCt > 1:3362718/1‑99 (MQ=12) aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGtttacg < 1:1812524/100‑6 (MQ=14) aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGc < 2:2744732/100‑1 (MQ=33) aGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGc < 1:3573048/100‑1 (MQ=33) ggggAAGCTGCGGTTAGATCTCCTCCTTAGCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTCTCTGATAAATAGTAAAAAGCAAGGCGTCTTGCg < 1:2910642/100‑1 (MQ=11) ggggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCg > 2:1809631/1‑100 (MQ=33) ggggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCg > 2:1312237/1‑100 (MQ=33) gggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGtttacgcg < 2:1085661/100‑8 (MQ=2) gggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGa < 1:162958/100‑1 (MQ=33) ggAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGaa > 2:3245305/1‑100 (MQ=33) gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg < 1:2877154/100‑1 (MQ=33) gAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAg < 2:491463/100‑1 (MQ=33) aCCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCa > 1:2572087/1‑100 (MQ=33) aCCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCa > 2:4171255/1‑100 (MQ=33) ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg > 1:587779/1‑100 (MQ=33) ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg > 2:3385076/1‑100 (MQ=33) tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTTTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc < 1:4344224/100‑1 (MQ=18) tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc > 2:1042773/1‑100 (MQ=33) tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc < 1:4369844/100‑1 (MQ=33) CGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTg > 1:3154408‑M2/1‑100 (MQ=255) CGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTg < 2:3158573‑M2/100‑1 (MQ=255) | TGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTG > NC_000913/4209571‑4209769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |