| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4209894 = | NA (NA) | 8 (0.060) | 5/156 | NT | 100% | intergenic (+45/‑149) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon |
| ? | NC_000913 | 4209912 = | 0 (0.000) | intergenic (+63/‑131) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon | |||||
GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATG > NC_000913/4209813‑4210011 | gagagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtt < 2:685898‑M2/1‑1 (MQ=255)gagagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtt < 1:827922‑M2/1‑1 (MQ=255)gagagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtt > 2:2942721‑M2/100‑100 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt > 2:73042‑M2/99‑100 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt < 1:2070349‑M2/2‑1 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt < 1:2070416‑M2/2‑1 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt < 2:4014418‑M2/2‑1 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt > 1:3170763‑M2/99‑100 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatacagatctttaaagagcaaatatctcaaacatcacccgaagatgagttt > 1:3615879‑M2/99‑100 (MQ=255) gagactcactaacaactttcgttgttcagtgtttcaattttcagctttatccagatttttaaagagcaaatatcccaaacatcacccgaagatgagtttt < 1:152208‑M2/3‑1 (MQ=255) gagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgatgatgagttt < 1:1332985‑M2/2‑1 (MQ=255) gagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtttt < 1:1184296‑M2/3‑1 (MQ=255) gagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtttt > 2:2116362‑M2/98‑100 (MQ=255) gagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtttt > 1:2344951‑M2/98‑100 (MQ=255) aggctcacgaacaactttcgttgttcagtgtttcaatgttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTg < 1:2591298‑M2/4‑1 (MQ=255) agactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTg < 2:2176198‑M2/4‑1 (MQ=255) agactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTg > 2:2508574‑M2/97‑100 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:4104906‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga > 2:2491229‑M2/96‑100 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:3178968‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:1963869‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:1451800‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga > 2:3418443‑M2/96‑100 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:3440516‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:4104827‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:2997343‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:4311209‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:4395411‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattgtcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:499418‑M2/5‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag < 1:3483863‑M2/6‑1 (MQ=255) ctcacgatcaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:2312832‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 2:322078‑M2/7‑1 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 1:3067004‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 2:1547623‑M2/7‑1 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 1:3174937‑M2/7‑1 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 1:2155399‑M2/7‑1 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:3352709‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:637763‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:3367742‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 1:2514887‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:2510500‑M2/94‑100 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgctccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 1:2824767‑M2/8‑1 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 1:3448303‑M2/8‑1 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 2:3615951‑M2/8‑1 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:3476692‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:940440‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:2676319‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:219939‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata < 1:4390326‑M2/9‑1 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:4306477‑M2/92‑100 (MQ=255) ctgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagaTTTGAGatat > 1:1312232‑M2/91‑100 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat > 2:1257833‑M2/91‑100 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat > 2:1257658‑M2/91‑100 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat < 2:35925‑M2/10‑1 (MQ=255) acgaacaactttcgttgttcagtgtttcaagtttcagcctgatccagatatttaaagatcaaatatctcaaacatcacccgaagatgaggTTTgaga < 1:2801528‑M2/7‑1 (MQ=255) cgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATAtt < 1:3302415‑M2/11‑1 (MQ=255) tttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACg > 1:1640041‑M2/41‑100 (MQ=255) ttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTCAAAAACg > 1:4176100‑M2/40‑99 (MQ=255) agagcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGagag > 1:1468764‑M2/36‑99 (MQ=255) ngcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAgttg > 1:3147638‑M2/34‑100 (MQ=255) agcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAgttg > 2:2633918‑M2/34‑100 (MQ=255) gcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAgttgt > 1:3188514‑M2/33‑100 (MQ=255) gcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAgttgt > 1:1102235‑M2/33‑100 (MQ=255) aatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCg > 1:3185563‑M2/30‑100 (MQ=255) TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg < 2:2666545‑M2/100‑1 (MQ=255) TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCGCTCAAATTTTCGCAACACgatg < 1:3681234‑M2/100‑1 (MQ=255) TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAATTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg < 2:3111036‑M2/100‑1 (MQ=255) | GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATG > NC_000913/4209813‑4210011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |