New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4240156NA (NA)16 (0.110) 8/164 NT NA intergenic (‑101/‑169) yjbT/psiE putative periplasmic protein/phosphate starvation inducible protein
?NC_000913 = 4240189 NA (NA)noncoding (33/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 236 total aligned reads displayed.

TGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTT  >  NC_000913/4240091‑4240288
                                                                                                  |                                                                                                   
tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                    <  2:4313940/100‑1 (MQ=255)
tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                    <  2:596799/100‑1 (MQ=255)
 gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                                                   >  1:1146096/1‑100 (MQ=255)
      tggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACggg                                                                                              <  2:2674399/100‑1 (MQ=255)
       ggCGGGGACTCTCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                             <  2:1808876/100‑1 (MQ=255)
        gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                                                            <  1:4164425/100‑1 (MQ=255)
         ntGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGCTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                           >  2:4170015/2‑100 (MQ=255)
         cagggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                           >  2:2988206/3‑100 (MQ=255)
          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggaagg                                                                                          >  1:1355244/1‑100 (MQ=255)
           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                         <  1:4319076/100‑1 (MQ=255)
            ttccgatcttGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                        <  1:4262716/91‑1 (MQ=255)
            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                        <  1:38010/100‑1 (MQ=255)
                 cACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCCACGGGTAGGTATATcc                                                                                   >  1:2576595/1‑100 (MQ=255)
                  aCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATTCGGCCTACGGGTAGGTATATCCg                                                                                  >  2:3397492/1‑100 (MQ=255)
                  aCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCg                                                                                  >  2:639562/1‑100 (MQ=255)
                  aCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCg                                                                                  >  2:1405189/1‑100 (MQ=255)
                  aCCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCg                                                                                  <  1:2550471/100‑1 (MQ=255)
                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGGGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                                                <  1:2260146/100‑1 (MQ=255)
                     tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGGATATCCGGCt                                                                               >  2:3790594/1‑100 (MQ=255)
                       aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                                                             >  1:2167874/1‑100 (MQ=255)
                       aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCtt                                                                              >  2:3869395/1‑99 (MQ=255)
                        aTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtg                                                                            <  2:3121413/100‑1 (MQ=255)
                          gtgTGATTTTTGGAGTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                           <  1:752341/97‑1 (MQ=255)
                          gggTGATTTTTGAATTACGGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                           <  1:1306507/99‑1 (MQ=255)
                          gggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                          <  1:1991971/100‑1 (MQ=255)
                          gggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                          <  1:4395759/100‑1 (MQ=255)
                          gggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggt                                                                          <  2:3201634/100‑1 (MQ=255)
                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                         >  2:4214057/1‑100 (MQ=255)
                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                         >  2:703846/1‑100 (MQ=255)
                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                         <  1:658805/100‑1 (MQ=255)
                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                         <  1:1920281/100‑1 (MQ=255)
                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGTGCCGCCAGGCGCGGATTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgt                                                                        <  1:1475329/100‑2 (MQ=255)
                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                                                        <  1:3911541/100‑1 (MQ=255)
                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                                                       <  2:1014221/100‑1 (MQ=255)
                              gATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAg                                                                      >  2:1568090/1‑100 (MQ=255)
                               aTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                                                     <  2:1271327/100‑1 (MQ=255)
                                tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                                                     >  1:1515884/1‑99 (MQ=255)
                                    tGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcgc                                                                <  2:928079/100‑1 (MQ=255)
                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                                                             <  2:3294872/100‑1 (MQ=255)
                                         tACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaa                                                           <  2:3693763/100‑1 (MQ=255)
                                           ccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAAt                                                         >  2:287894/1‑100 (MQ=255)
                                            cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATc                                                        >  1:397560/1‑100 (MQ=255)
                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                     >  1:1786138/1‑100 (MQ=255)
                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                     >  2:3333516/1‑100 (MQ=255)
                                                tttGGTGCGGTTTGTCTTGCCGGATTCGCCGCCAGGCGCGGCTTATCGGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                                                    <  1:420408/100‑1 (MQ=255)
                                                 ttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATACAGGt                                                   >  1:1029455/1‑100 (MQ=255)
                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                 >  1:4129313/1‑100 (MQ=255)
                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                           >  2:1939744/1‑100 (MQ=255)
                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                           <  1:1939737/100‑1 (MQ=255)
                                                         gTTTGTCTTGCCGGATGCGACGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGCTGAACaaa                                           >  2:1976170/1‑100 (MQ=255)
                                                          tttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaaa                                          <  1:2795377/100‑1 (MQ=255)
                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc                                         <  1:869223/100‑1 (MQ=255)
                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc                                         <  2:2656532/100‑1 (MQ=255)
                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc                                         <  2:2472672/100‑1 (MQ=255)
                                                            tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa                                        <  1:2688363/100‑1 (MQ=255)
                                                             gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcacccaagccggtaattcaaaaataacccattcaggtgattcccagccacc                                       <  1:919857‑M2/100‑63 (MQ=255)
                                                               ctttactgatgcgctGCCAGGCGCGGCTTTTCCGGCaagacaaacatcaccaaagccggtaattcaaaaatcacccattcaggtgattcccag                                            <  1:311684‑M2/86‑58 (MQ=255)
                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccag                                     <  2:2945808‑M2/100‑65 (MQ=255)
                                                               cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac                                     >  2:4236188/1‑100 (MQ=255)
                                                                ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagc                                    <  2:1988890‑M2/100‑66 (MQ=255)
                                                                ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATaca                                    <  1:1726467/100‑1 (MQ=255)
                                                                  gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaa                                  <  1:407366‑M2/100‑68 (MQ=255)
                                                                  gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAcaca                                  <  2:4038026/100‑1 (MQ=255)
                                                                  gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAcaca                                  <  1:631949/100‑1 (MQ=255)
                                                                  gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAcaca                                  <  1:3315893/100‑1 (MQ=255)
                                                                  gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAcaca                                  >  1:953253/1‑100 (MQ=255)
                                                                     ggATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgc                               >  2:407367‑M2/1‑30 (MQ=255)
                                                                     ggATGCGCCGCCAGGCGC‑‑‑‑‑ATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaa                          <  1:1815016‑M2/100‑76 (MQ=255)
                                                                       aTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaaaaa                             >  2:1216377/1‑100 (MQ=255)
                                                                        tccgccgcCAGGCGCGGCTTATCCGGCCTACTGGTAGGTATATCCGGCTTTGGTGGAGGCGCGATCCAAATCCAGGTTGAACAAAACATACACAAAAAat                            <  1:2669207/98‑1 (MQ=255)
                                                                         gcgcCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAata                           <  2:83270/100‑1 (MQ=255)
                                                                         gcgcCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAata                           <  1:1158282/100‑1 (MQ=255)
                                                                          cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                          >  2:1910321/1‑100 (MQ=255)
                                                                          cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                          >  1:3709855/1‑100 (MQ=255)
                                                                          cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAata                           >  1:1678926/1‑99 (MQ=255)
                                                                           gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                         >  1:1659820/1‑100 (MQ=255)
                                                                           gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                         <  1:1275227/100‑1 (MQ=255)
                                                                           gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                         <  2:2455005/100‑1 (MQ=255)
                                                                            ccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                        <  2:323894/100‑1 (MQ=255)
                                                                             cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                       <  2:1171279/100‑1 (MQ=255)
                                                                               ccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtc                     <  1:49068/100‑1 (MQ=255)
                                                                                 aGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtctc                   <  1:3065334/100‑1 (MQ=255)
                                                                                    cgcgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGt                >  2:1113346/1‑100 (MQ=255)
                                                                                      cgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTca              >  2:2529006/1‑100 (MQ=255)
                                                                                      cgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTc               <  1:221502/99‑1 (MQ=255)
                                                                                      cgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTACAAATCCAGGTTGAACAAAACATACAAAAAAAATATAGATCTCCGTca              <  1:287893/100‑1 (MQ=255)
                                                                                        gCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTcaca            >  1:1416709/1‑100 (MQ=255)
                                                                                            aTCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAtttt        <  2:2775621/100‑1 (MQ=255)
                                                                                              ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      <  1:3369652/100‑1 (MQ=255)
                                                                                              ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      <  2:2135534/100‑1 (MQ=255)
                                                                                              ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      <  2:2661428/100‑1 (MQ=255)
                                                                                               cGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc     >  1:2805442/1‑100 (MQ=255)
                                                                                               cGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc     <  1:3378995/100‑1 (MQ=255)
                                                                                               cGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACAAAAAAAATATAGATCTCCGTCACAttttt       <  1:2510324/98‑1 (MQ=255)
                                                                                                ggCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctgg     >  1:3207857‑M2/1‑3 (MQ=255)
                                                                                                ggCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg    <  2:1641779/100‑1 (MQ=255)
                                                                                                ggCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg    <  2:2557134/100‑1 (MQ=255)
                                                                                                 gCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctggaa   >  1:3588170‑M2/1‑2 (MQ=255)
                                                                                                 gCCTACGTGTAGGTATATCCGGCTTTGGTGGAGGCGAGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCACCGTCACATTTTTGCGt   <  1:867728/100‑1 (MQ=255)
                                                                                                  caagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctggaac  <  2:236142‑M2/100‑100 (MQ=255)
                                                                                                  |                                                                                                   
TGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTT  >  NC_000913/4240091‑4240288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.