BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4602165	150 (0.950)	15 (0.100)	7/164	NT	9.3%	coding (694/771 nt)	yjjP	DUF1212 family inner membrane protein
*	?	NC_000913	= 4602178	153 (1.060)	15 (0.100)	7/164	NT	9.3%	coding (681/771 nt)	yjjP	DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 198 total aligned reads displayed.

GAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGC  >  NC_000913/4602079‑4602273

gAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGt                                                                                                 >  1:3415586/1‑100 (MQ=255)

  aaTTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgc                                                                                               >  2:2803811‑M2/1‑98 (MQ=255)

   atgcGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGcc                                                                                              <  1:3824384/97‑1 (MQ=255)

   aTTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgcc                                                                                              >  1:3194336‑M2/1‑97 (MQ=255)

   aTTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgcc                                                                                              >  1:3080873‑M2/1‑97 (MQ=255)

   aTTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgcc                                                                                              >  2:3534022‑M2/1‑97 (MQ=255)

    ttCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCGTCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgcca                                                                                             <  2:2987344‑M2/100‑5 (MQ=255)

       gATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgccagtc                                                                                          <  1:4289357‑M2/100‑8 (MQ=255)

       gATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTgccagtc                                                                                          >  2:162257‑M2/1‑93 (MQ=255)

        aTCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGTGATCGCCCAGCGTGCCAGTcc                                                                                         <  1:2163363/100‑1 (MQ=255)

         tCACACCCATCCGCGTAGCCCCCAACTCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCg                                                                                        <  2:4198023/100‑1 (MQ=255)

          cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                       <  2:3970501/100‑1 (MQ=255)

          cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                       >  1:481054/1‑100 (MQ=255)

           acacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGt                                                                                      <  2:1036539/100‑1 (MQ=255)

            cacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTa                                                                                     <  1:133488/100‑1 (MQ=255)

            cacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACACAGGTAACCAATGACAGCAAACTATCAATCGCCCAACATACCAATccaat                                                                                      >  1:4014014/1‑96 (MQ=255)

              cccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTAtt                                                                                   <  2:3028156/100‑1 (MQ=255)

                cATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGa                                                                                 >  1:2407957/1‑100 (MQ=255)

                  tCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtn                                                                               <  2:4063971/100‑2 (MQ=255)

                    cgcgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtgtg                                                                             >  2:87756/1‑100 (MQ=255)

                      cgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGc                                                                           <  2:4289389/100‑1 (MQ=255)

                       gTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGcc                                                                          <  2:2497083/100‑1 (MQ=255)

                        tAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCt                                                                         >  2:3544702/1‑100 (MQ=255)

                         aGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCtt                                                                        <  2:628612/100‑1 (MQ=255)

                           cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                                      >  1:624032/1‑100 (MQ=255)

                           cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                                      >  2:3255525/1‑100 (MQ=255)

                           cccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTa                                                                      <  2:3596254/100‑1 (MQ=255)

                            ccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaa                                                                     >  2:245090/1‑100 (MQ=255)

                            ccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaa                                                                     <  2:3098765/100‑1 (MQ=255)

                             cccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCTGTATTGATGTGGCCTTTcaa                                                                    >  1:1191399/1‑100 (MQ=255)

                             cccAAAAAGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTACCAGTCCGGTATTGATGTGGCCTTTaaa                                                                    <  1:1227305/100‑1 (MQ=255)

                              ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                                   <  1:1033137/100‑1 (MQ=255)

                              ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                                   >  1:1885619/1‑100 (MQ=255)

                                aaaTCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACat                                                                 <  2:877379/100‑1 (MQ=255)

                                   tCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATc                                                              <  2:3866701/100‑1 (MQ=255)

                                   tCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATc                                                              <  1:1931913/100‑1 (MQ=255)

                                      tcggTGCCCTCACCGCGCCGCCCCAGGTAGCCAGTGTCAGCTGTCTCGCGCTCGCCCAACGTGCCAGTCCGGTATTGCTGCGGCGTTTAAACATGTccgt                                                           <  1:2859397/97‑4 (MQ=255)

                                       cAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCg                                                          >  2:1164085/1‑100 (MQ=255)

                                        aGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGa                                                         >  1:1065375/1‑100 (MQ=255)

                                          tGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACg                                                       >  2:1416131/1‑100 (MQ=255)

                                          tGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACg                                                       <  1:1549538/100‑1 (MQ=255)

                                            ccATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGc                                                     <  2:2303227/100‑1 (MQ=255)

                                             cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCa                                                    >  2:2309378/1‑100 (MQ=255)

                                             cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCa                                                    <  1:4120495/100‑1 (MQ=255)

                                             cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACGGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCa                                                    <  1:356597/100‑1 (MQ=255)

                                              aTCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAt                                                   <  1:990596/100‑1 (MQ=255)

                                               tCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAtt                                                  <  1:2228537/100‑1 (MQ=255)

                                                cACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAtc                                                  >  1:2680078/1‑98 (MQ=255)

                                                cACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTa                                                 >  2:1887740/1‑100 (MQ=255)

                                                cACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTa                                                 <  2:553203/100‑1 (MQ=255)

                                                 aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTATACATATCGGCGACGGCATTaa                                                <  1:128292/100‑1 (MQ=255)

                                                   tACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATc                                              <  2:1166410/100‑1 (MQ=255)

                                                   tACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATc                                              >  1:506143/1‑100 (MQ=255)

                                                   tACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATc                                              <  2:31507/100‑1 (MQ=255)

                                                     cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                            <  2:3750259/100‑1 (MQ=255)

                                                     cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                            >  2:2839336/1‑100 (MQ=255)

                                                     cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                            >  1:3222825/1‑100 (MQ=255)

                                                     cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                            >  1:3286992/1‑100 (MQ=255)

                                                     cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTACGGTATTGATGTGGCCTTTAAACATATCGGCGAAGGCATTAATCaa                                            >  1:3499529/1‑100 (MQ=255)

                                                      gCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAAc                                           <  2:2020967/100‑1 (MQ=255)

                                                      gCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAAc                                           <  2:280968/100‑1 (MQ=255)

                                                        cGACGCAGGTAGCCAGTTTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCTGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACg                                          <  1:1521669/99‑1 (MQ=255)

                                                        cGACGCAGGTAGCCAGTGTCAGTAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACgg                                         <  2:1409537/100‑1 (MQ=255)

                                                        cGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACgg                                         >  1:1617625/1‑100 (MQ=255)

                                                        cGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACgg                                         >  1:2527086/1‑100 (MQ=255)

                                                          aCGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGaa                                       <  2:712254/100‑1 (MQ=255)

                                                             cAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGc                                    >  1:3493464/1‑100 (MQ=255)

                                                              aGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGcc                                   >  1:741531/1‑100 (MQ=255)

                                                                gTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGTCGGCATTAATCAACGGAAAGCCCg                                 <  1:3137028/100‑1 (MQ=255)

                                                                gTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCg                                 <  1:2012074/100‑1 (MQ=255)

                                                                gTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCg                                 <  1:1006718/100‑1 (MQ=255)

                                                                     cAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACt                            >  2:1990331/1‑100 (MQ=255)

                                                                       gtgtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTag                          >  1:2112267/1‑100 (MQ=255)

                                                                        tgtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagc                         <  2:4047441/100‑1 (MQ=255)

                                                                         gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagca                        >  1:2844450/1‑100 (MQ=255)

                                                                         gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagca                        <  2:3415607/100‑1 (MQ=255)

                                                                         gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGGCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCAGCACTagca                        >  1:2509617/1‑100 (MQ=255)

                                                                          tCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcag                       <  2:3493487/100‑1 (MQ=255)

                                                                           cagcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcagc                      >  2:370663/1‑100 (MQ=255)

                                                                            agcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAgcagca                     >  1:258701/1‑100 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtg                    <  2:3065667‑M2/100‑78 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtg                    <  1:75571‑M2/100‑78 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtg                    <  2:2294589‑M2/100‑78 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtg                    <  2:1048203‑M2/100‑78 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtg                    <  2:177903‑M2/100‑78 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                    >  2:2775369/1‑100 (MQ=255)

                                                                             gcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                    >  2:489717/1‑100 (MQ=255)

                                                                              cagACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacgtgcgtcggcgtcgtgatggcactgacgatttgggggctgcgcggatgggggtg                    <  1:2686775‑M2/99‑78 (MQ=255)

                                                                                gACTGGCGATCGCCCAGCGTgccagtctgctgacactggctacctgcgtcggcgtagtgatggcactgacgatttgggggctacgcggatgggtgtgatc                 <  2:1301497‑M2/100‑81 (MQ=255)

                                                                                 aCTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACg                >  2:611855/1‑100 (MQ=255)

                                                                                  cTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGc               >  2:2655899/1‑100 (MQ=255)

                                                                                    ggCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTg             >  1:1389266/1‑100 (MQ=255)

                                                                                       gATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcg          >  2:3561607/1‑100 (MQ=255)

                                                                                        aTCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcgg         <  1:844116/100‑1 (MQ=255)

                                                                                        aTCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcgg         <  2:2407967/100‑1 (MQ=255)

                                                                                         tCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGTAAAGCCCGGCACTAGCAGCAGAACGCTggcggc        <  1:2888917/100‑1 (MQ=255)

                                                                                            cccAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCAt     >  2:1500681/1‑100 (MQ=255)

                                                                                            cccAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCAt     >  1:2934784/1‑100 (MQ=255)

                                                                                             ccAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATc    <  2:1660375/100‑1 (MQ=255)

                                                                                              cAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCg   <  1:1737573/100‑1 (MQ=255)

GAAATTCGATCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGC  >  NC_000913/4602079‑4602273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.