New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4639713169 (1.080)6 (0.040) 4/172 NT 3.4% coding (594/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
?NC_000913 = 4639734 176 (1.160)coding (573/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
Rejected: Frequency below cutoff threshold.

Only 100 of 216 total aligned reads displayed.

GGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAC  >  NC_000913/4639635‑4639833
                                                                                                   |                                                                                                   
ggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACgg                                                                                                     >  1:436706/1‑100 (MQ=255)
   ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGccg                                                                                                  >  2:2937770‑M2/1‑97 (MQ=255)
   ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGccg                                                                                                  <  2:162962‑M2/100‑4 (MQ=255)
   ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTGTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                                                                                                   >  1:4310187‑M2/1‑97 (MQ=255)
    gCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCgg                                                                                                 <  1:3987428/100‑1 (MQ=255)
     cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGccg                                                                                                  <  1:3310835‑M2/98‑4 (MQ=255)
     cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGt                                                                                                >  2:3268265/1‑100 (MQ=255)
     cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGt                                                                                                >  2:776063/1‑100 (MQ=255)
      gatgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTc                                                                                               >  1:3416466/1‑100 (MQ=255)
       atgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCa                                                                                              <  1:1507313/100‑1 (MQ=255)
          atTTTCGGCTTATCCGGCTTATATTCTAAATGTTTACGATTACGGTGGATCGTCACGTCTACAGGACGGTCGTGCGGTTTCAGCTCACGGCCGGTCa                                                                                              <  2:28617/97‑1 (MQ=255)
          atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTGCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                                                                                           <  1:3129366/100‑1 (MQ=255)
          atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                                                                                           <  2:1942988/100‑1 (MQ=255)
          atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                                                                                           >  2:1344997/1‑100 (MQ=255)
          atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                                                                                           <  2:1536790/100‑1 (MQ=255)
           tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                                                                                          <  2:2813817/100‑1 (MQ=255)
           tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                                                                                          >  2:2654496/1‑100 (MQ=255)
           tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                                                                                          >  1:960187/1‑100 (MQ=255)
              ccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttctt                                                                                       >  2:2192306/1‑100 (MQ=255)
               cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  1:1626273/100‑1 (MQ=255)
               cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  2:3021415/100‑1 (MQ=255)
               cggcgtatccggcgtaAATTCGAAATCTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACCGCCGGTCATTttct                                                                                        <  1:4037433/98‑1 (MQ=255)
                ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca                                                                                     <  2:640675/100‑1 (MQ=255)
                      tccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGGGGTTTTAGCTCACGACCGGTCATTTTCTTCAGCAGtt                                                                               >  1:2980124/1‑100 (MQ=255)
                       ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                                                              <  2:434352/100‑1 (MQ=255)
                        cggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCa                                                                             <  2:19177/100‑1 (MQ=255)
                          gcgtaGATTCAAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGc                                                                           <  1:2895145/100‑1 (MQ=255)
                               gATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACggg                                                                      <  2:4278671/100‑1 (MQ=255)
                                aTTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGa                                                                     >  2:2345988/1‑100 (MQ=255)
                                  tCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACt                                                                   <  1:2638948/100‑1 (MQ=255)
                                   cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTg                                                                  <  2:3584517/100‑1 (MQ=255)
                                   cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTg                                                                  >  2:1384543/1‑100 (MQ=255)
                                   cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTg                                                                  >  1:2547795/1‑100 (MQ=255)
                                    gAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGa                                                                 >  2:2035343/1‑100 (MQ=255)
                                    gAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGa                                                                 <  2:3622536/100‑1 (MQ=255)
                                    gAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGa                                                                 >  2:2238741/1‑100 (MQ=255)
                                        tGTTTACGGATACGGCGGATCGTCACGTCTACAATACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAtt                                                              <  1:2321556/99‑1 (MQ=255)
                                         gTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAtttt                                                            <  2:2538638/100‑1 (MQ=255)
                                         gTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAtttt                                                            >  1:1322162/1‑100 (MQ=255)
                                          tttACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTg                                                           <  1:4233686/100‑1 (MQ=255)
                                          tttACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTg                                                           >  2:1141600/1‑100 (MQ=255)
                                          tttACCGATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTTACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTg                                                           <  1:2438817/100‑1 (MQ=255)
                                            tACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGcc                                                         >  2:3722876/1‑100 (MQ=255)
                                            tACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGcc                                                         >  2:3689218/1‑100 (MQ=255)
                                             aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCt                                                        <  2:1564026/100‑1 (MQ=255)
                                                aaTACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTggg                                                     >  2:4143551/1‑100 (MQ=255)
                                                aaTACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTggg                                                     >  1:1972466/1‑100 (MQ=255)
                                                   aCGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGttt                                                  >  2:1768463/1‑100 (MQ=255)
                                                   aCGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGttt                                                  <  1:545039/100‑1 (MQ=255)
                                                    cggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGtttt                                                 <  1:1421106/100‑1 (MQ=255)
                                                      gcggTTCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               <  1:1393278/100‑1 (MQ=255)
                                                      gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               <  1:1200683/100‑1 (MQ=255)
                                                        gtaTCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCTGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTcac                                              <  2:4192807/97‑1 (MQ=255)
                                                         gATCGTCACGTCTACAGTACGGTCGTGCGGTTTCACCTCACGGCCGGTCATTTTCTTCAGCAGTGCACCACGGCACTGAATTTTGCCTGGGTTTTcac                                              <  1:3533178/98‑1 (MQ=255)
                                                           tCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGaa                                          <  2:823829/100‑1 (MQ=255)
                                                            cGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAg                                         <  1:2808897/100‑1 (MQ=255)
                                                             gTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGt                                        >  2:1045334/1‑100 (MQ=255)
                                                             gTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGt                                        >  1:843272/1‑100 (MQ=255)
                                                               cACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGa                                      <  1:1456495/100‑1 (MQ=255)
                                                                 cGTCTACAGTACGGTCGTGCGGTTTCAGCTCATGGCCGGACAATTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg                                    <  1:3094160/100‑1 (MQ=255)
                                                                 cGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg                                    >  1:1147657/1‑100 (MQ=255)
                                                                  gTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGc                                   >  1:1229591/1‑100 (MQ=255)
                                                                    cTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCAt                                 <  2:592957/100‑1 (MQ=255)
                                                                    cTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCAt                                 >  2:2442012/1‑100 (MQ=255)
                                                                     tACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATg                                <  1:1677519/100‑1 (MQ=255)
                                                                      aCAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATgg                               <  2:4291131/100‑1 (MQ=255)
                                                                         gTACGGTCGTGCGGTTTCAGCTCACGGccgtactgtagacgtgacgatccgccgtattcgtaaacctttcgaatctacgccggatacgccggaaatcatc                            <  1:2069215‑M2/100‑74 (MQ=255)
                                                                         gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcgc                            >  2:2521509/1‑100 (MQ=255)
                                                                         gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcgc                            <  2:3071560/100‑1 (MQ=255)
                                                                           atggTCGTGCGGTTTCAGCTCACGGCCGGTTATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCgg                          <  1:2168113/98‑1 (MQ=255)
                                                                           aCGGTCGTGCGGTTTCAGCTCACGGccgtactgtagacgtgacgatccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgc                          <  1:2119798‑M2/100‑76 (MQ=255)
                                                                            cGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGa                         <  2:3210184/100‑1 (MQ=255)
                                                                              gTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAAc                       <  2:1406860/100‑1 (MQ=255)
                                                                              gTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTATGCCTGGGTTTTCACAGAAGTGAATCATGGCGCGGAAc                       <  1:2725616/100‑1 (MQ=255)
                                                                                cGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTc                     <  2:4076003/100‑1 (MQ=255)
                                                                                  tGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGc                   >  1:1324848/1‑100 (MQ=255)
                                                                                     ggTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgc                <  1:1843151/100‑1 (MQ=255)
                                                                                     ggTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgc                <  2:2276416/100‑1 (MQ=255)
                                                                                      gTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACTGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCGTGGCGCGGAACTCGCTgc                <  1:2825624/99‑1 (MQ=255)
                                                                                      gTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgcg               >  1:744672/1‑100 (MQ=255)
                                                                                        ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg             <  1:1027686/100‑1 (MQ=255)
                                                                                        ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg             <  2:3416487/100‑1 (MQ=255)
                                                                                        ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg             <  2:2379029/100‑1 (MQ=255)
                                                                                        gtCAGCTCACGGCCAGTCATTTTCTTTAGTTGCTTAGCACTGGAATGGTGATTGCTTGAGGTCTCCGAGAAGTGATGCATGGTGGGGAACTCGCTGcgcg             <  1:825232/99‑1 (MQ=255)
                                                                                          cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc           >  1:190690/1‑100 (MQ=255)
                                                                                           aGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCa          <  1:230163/100‑1 (MQ=255)
                                                                                            gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTTAAGCATGGCGCGGAACTCGCTGCGCGGCAg         >  1:57677/1‑100 (MQ=255)
                                                                                            gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg         <  2:3465219/100‑1 (MQ=255)
                                                                                            gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg         >  2:2123729/1‑100 (MQ=255)
                                                                                            gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg         >  2:1242410/1‑100 (MQ=255)
                                                                                              tCACGGCCGGTCATTTTCTTCAGCAGTTCCGCACGGGACTGAATTTTGTCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCt       <  2:1550003/100‑1 (MQ=255)
                                                                                              tCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCt       <  2:397665/100‑1 (MQ=255)
                                                                                              tCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCt       >  2:24343/1‑100 (MQ=255)
                                                                                               cACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCtt      >  1:122835/1‑100 (MQ=255)
                                                                                                 cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGGAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt    <  1:4005664/100‑1 (MQ=255)
                                                                                                 cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt    <  2:627375/100‑1 (MQ=255)
                                                                                                 cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt    <  2:1703419/100‑1 (MQ=255)
                                                                                                 cGGACGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt    >  1:492254/1‑100 (MQ=255)
                                                                                                   gCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAc  <  2:3632960/100‑1 (MQ=255)
                                                                                                   gCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAc  <  1:3012062/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAC  >  NC_000913/4639635‑4639833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.