Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,755,639 G→A 100% intergenic (‑498/‑59) ydhZ ← / → pykF uncharacterized protein/pyruvate kinase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,755,6390GA98.6% 374.5 / ‑4.2 115intergenic (‑498/‑59)ydhZ/pykFuncharacterized protein/pyruvate kinase I
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base A (58/53);  total (60/55)
Fisher's exact test for biased strand distribution p-value = 6.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 115 total aligned reads displayed.

CTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGA  >  NC_000913/1755542‑1755734
                                                                                                 |                                                                                               
cTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACa                                                                                               >  2:59512/1‑100 (MQ=255)
 tGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAg                                                                                              <  2:2284605/100‑1 (MQ=255)
   agaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTg                                                                                            >  2:254543/1‑100 (MQ=255)
    gaCACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTgc                                                                                           <  2:1906565/100‑1 (MQ=255)
      cacaAGCACACATTCCCCTTCACGCTTTTTCGAAGTCAACTAGCCTTAGAGCGAGGCACCCCCACTTTCGTAATACCGGATTGGCTTTCCGCCAGTgcg                                                                                          >  1:2027703/1‑99 (MQ=255)
       acaAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGcc                                                                                        >  2:1479828/1‑100 (MQ=255)
        cttccgatctttCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGccc                                                                                       <  1:3822633/90‑1 (MQ=255)
        caATCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCATTAGAGCGAGGAACCACCACTTTCGTAATACCCAATTCTTTTTCCGACAGt                                                                                             >  1:3963807/1‑94 (MQ=255)
        caAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGccc                                                                                       >  2:3292641/1‑100 (MQ=255)
          aGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAg                                                                                     <  2:1420226/100‑1 (MQ=255)
          aGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAg                                                                                     >  1:1954699/1‑100 (MQ=255)
            cacacaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGaa                                                                                   <  2:3329382/100‑1 (MQ=255)
              cacaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAg                                                                                 >  1:1251428/1‑100 (MQ=255)
               acaTTCCTCTGCACGCTTTTTTTTTTTTTTTTATCCTTAAAGCGAGGCACCACCATTTTTGTAATACGGGTTTCGCTTTCCGGCAGt                                                                                             >  1:2145993/1‑87 (MQ=255)
               acaTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGc                                                                                <  2:3724502/100‑1 (MQ=255)
                  ttCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAg                                                                             >  2:3887760/1‑100 (MQ=255)
                    ccTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGtt                                                                           >  1:1053698/1‑100 (MQ=255)
                    ccTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGtt                                                                           >  2:3959884/1‑100 (MQ=255)
                    ccTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGtt                                                                           >  2:3960285/1‑100 (MQ=255)
                        tGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTtctc                                                                       <  2:3164885/100‑1 (MQ=255)
                         gCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTcc                                                                      >  1:2841144/1‑100 (MQ=255)
                         gCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTcc                                                                      >  2:2807848/1‑100 (MQ=255)
                         gCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTcc                                                                      <  2:3992680/100‑1 (MQ=255)
                         gCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTcc                                                                      >  1:1920732/1‑100 (MQ=255)
                          cACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTtctc                                                                       <  1:3814465/98‑1 (MQ=255)
                          cACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTcc                                                                      <  1:1524069/99‑1 (MQ=255)
                            cGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCAATTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCa                                                                    <  2:650351/99‑1 (MQ=255)
                              cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATcc                                                                 >  2:3609438/1‑100 (MQ=255)
                              cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATcc                                                                 <  2:1537260/100‑1 (MQ=255)
                              cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATcc                                                                 <  2:1954706/100‑1 (MQ=255)
                              cTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATcc                                                                 >  2:603584/1‑100 (MQ=255)
                               tttttCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCt                                                                >  1:455995/1‑100 (MQ=255)
                                  ttCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTtct                                                             >  2:2572621/1‑100 (MQ=255)
                                  ttCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTtct                                                             >  2:347580/1‑100 (MQ=255)
                                   tCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTtctc                                                            <  1:4189461/100‑1 (MQ=255)
                                    tcttGTCACCTATCCTTAGAGCCAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTtctc                                                            <  1:1459509/96‑1 (MQ=255)
                                    cGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCAGCCTTCTCa                                                           <  2:2131326/100‑1 (MQ=255)
                                     gATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCaa                                                          >  2:2177160/1‑100 (MQ=255)
                                     gATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCaa                                                          <  2:913485/100‑1 (MQ=255)
                                      aTGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAAc                                                         <  2:256836/100‑1 (MQ=255)
                                       tGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCaatt                                                        >  2:342357/1‑98 (MQ=255)
                                       tGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAACCAAGTTTCTCCCAACCTTCTCagat                                                        >  2:1459515/1‑97 (MQ=255)
                                        gTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACtt                                                       <  2:429092/100‑1 (MQ=255)
                                          cACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa                                                     <  2:3770861/100‑1 (MQ=255)
                                          cACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa                                                     >  2:1450706/1‑100 (MQ=255)
                                           aCCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaaa                                                    >  1:1246712/1‑100 (MQ=255)
                                           aCCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaaa                                                    <  1:3464685/100‑1 (MQ=255)
                                            ccTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTTTCATCTTAaag                                                   <  1:2308762/100‑1 (MQ=255)
                                            ccTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaag                                                   >  1:3696727/1‑100 (MQ=255)
                                            ccTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaag                                                   <  1:1479822/100‑1 (MQ=255)
                                              tATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagac                                                 >  2:4198899/1‑100 (MQ=255)
                                              tATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagac                                                 >  1:931850/1‑100 (MQ=255)
                                                tCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta                                               <  2:4216239/100‑1 (MQ=255)
                                                tCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta                                               >  2:517320/1‑100 (MQ=255)
                                                 ccTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaa                                              >  1:3735667/1‑100 (MQ=255)
                                                 ccTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaa                                              >  2:410439/1‑100 (MQ=255)
                                                 ccTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaa                                              <  1:2853946/100‑1 (MQ=255)
                                                 ccTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaa                                              <  1:716396/100‑1 (MQ=255)
                                                  cTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaag                                             >  2:1505531/1‑100 (MQ=255)
                                                  cTTAGAGCGAGGCAACACCACTTTCGTAATACTGGATTCGCTTTACGACAGTGCGCCCAGAAAGCAAGTTTAGCCTATCCTTCTCAACTTAaagactaa                                              >  1:4360305/1‑99 (MQ=255)
                                                    tAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagactaagac                                           >  1:3911409/1‑100 (MQ=255)
                                                      gagCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTg                                         <  2:3884370/100‑1 (MQ=255)
                                                      gagCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTg                                         >  1:4402621/1‑100 (MQ=255)
                                                       agCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGt                                        <  2:3077589/100‑1 (MQ=255)
                                                        gCGAGGCACCACCACTTTCGAAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTc                                       >  1:2700714/1‑100 (MQ=255)
                                                           aGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATg                                    <  2:832597/100‑1 (MQ=255)
                                                              caccaccacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGaaa                                 <  1:823043/100‑1 (MQ=255)
                                                              caccaccacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGaaa                                 >  2:1684403/1‑100 (MQ=255)
                                                               accaccacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGaaaa                                >  2:2914722/1‑100 (MQ=255)
                                                                ccaccacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGaaaaa                               >  2:714278/1‑100 (MQ=255)
                                                                  accacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAg                              >  2:2612484/1‑99 (MQ=255)
                                                                  accacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGa                             >  1:389996/1‑100 (MQ=255)
                                                                  accacTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGa                             >  2:854859/1‑100 (MQ=255)
                                                                   ccacTTTCGTAATACCGTATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCTCATCCTGCTGAACTTAAAGACTAAGAATGTCATGAAAAAGAc                            >  1:1394693/1‑100 (MQ=255)
                                                                   ccacTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGAc                            <  1:2261432/100‑1 (MQ=255)
                                                                    cacTTTCGTAATACCGGATTCACTTTCCGACAGTGCAAAAAAAAAGAAAGTAACACCAATCCTTCACAACATAAAGACCAAGACTGTCATGAAAAAGAc                            <  1:364750/99‑1 (MQ=255)
                                                                     acTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCa                          >  1:3040239/1‑100 (MQ=255)
                                                                      cTTTCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCaa                         >  2:4064441/1‑100 (MQ=255)
                                                                        ttCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCaaaa                       >  1:4216168/1‑100 (MQ=255)
                                                                        ttCGTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCaaaa                       >  1:4223741/1‑100 (MQ=255)
                                                                           gTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAAtt                     >  1:2910899/1‑99 (MQ=255)
                                                                           gTAATACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTg                    >  1:3654874/1‑100 (MQ=255)
                                                                              aTACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGttt                 >  2:1060628/1‑100 (MQ=255)
                                                                              aTACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGttt                 <  2:1087687/100‑1 (MQ=255)
                                                                               tACCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTg                <  2:1700307/100‑1 (MQ=255)
                                                                                aCCGGCTTCCCTTGTCGACCGTGGGCCTTGAGAGGAAGTTTCTCCCATCCTTCTCAAGTGAAATACTAGGACTGTCATGAAAAAGACCAGAATTGttt                 <  1:3068539/98‑1 (MQ=255)
                                                                                aCCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGc               <  2:1644891/100‑1 (MQ=255)
                                                                                aCCGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGc               >  2:1124611/1‑100 (MQ=255)
                                                                                 ccGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCa              <  2:1212561/100‑1 (MQ=255)
                                                                                  cGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAc             <  2:2847573/100‑1 (MQ=255)
                                                                                  cGGATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAc             <  2:2533718/100‑1 (MQ=255)
                                                                                   ggATTCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCAcc            <  1:4198868/100‑1 (MQ=255)
                                                                                      ttCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATc         <  1:59512/100‑1 (MQ=255)
                                                                                      ttCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATc         <  1:764556/100‑1 (MQ=255)
                                                                                       tCGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCg        <  2:2665090/100‑1 (MQ=255)
                                                                                        cGCTTTCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCgg       >  2:1065614/1‑100 (MQ=255)
                                                                                          cTTTCCGACAGTGCGCCCATAAAGCAAGTTTCGCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGAc     <  2:1843308/100‑1 (MQ=255)
                                                                                            ttCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCg   >  2:427876/1‑100 (MQ=255)
                                                                                             tCCGACAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGa  <  2:628260/100‑1 (MQ=255)
                                                                                             tCCGACAGTGCGCCCAGAAAGCAAGTTTCTCACATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTCGCACCATCGGACCGa  <  1:228637/100‑1 (MQ=255)
                                                                                                 |                                                                                               
CTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTAAGACTGTCATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGA  >  NC_000913/1755542‑1755734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: