Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,089,854 A→T 15.6% intergenic (‑141/‑142) yefM ← / → hisL antitoxin of the YoeB‑YefM toxin‑antitoxin system/his operon leader peptide

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,089,8540AT15.6% 430.1 / 67.6 173intergenic (‑141/‑142)yefM/hisLantitoxin of the YoeB‑YefM toxin‑antitoxin system/his operon leader peptide
Reads supporting (aligned to +/- strand):  ref base A (73/73);  new base T (10/17);  total (83/90)
Fisher's exact test for biased strand distribution p-value = 2.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.79e-02

Only 100 of 174 total aligned reads displayed.

CGTTAATTAACTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTT  >  NC_000913/2089755‑2089952
                                                                                                   |                                                                                                  
   taattaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTc                                                                                                 >  2:2504018/1‑100 (MQ=255)
   taattaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTc                                                                                                 <  2:3792246/100‑1 (MQ=255)
    aattaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTcc                                                                                                <  1:1224005/100‑1 (MQ=255)
    aattaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTcc                                                                                                <  1:170778/100‑1 (MQ=255)
      ttaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCctc                                                                                              <  1:864053/100‑1 (MQ=255)
      ttaaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCctc                                                                                              <  1:56804/100‑1 (MQ=255)
       taaCTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCctct                                                                                             >  2:3478775/1‑100 (MQ=255)
          cTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAg                                                                                          >  1:2616654/1‑100 (MQ=255)
          cTATTTATTAATTAGTGTGTAGATCAAGGTATTGTCAGTGAGATGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAg                                                                                          >  1:1106164/1‑100 (MQ=255)
          cTATTTATCAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGTCATCAGCTAAGAGGACAGTCCTCTTAg                                                                                          <  2:2925351/100‑1 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         <  1:476272/100‑1 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         >  1:1319410/1‑100 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         >  1:1318378/1‑100 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         <  2:2232434/100‑1 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         <  1:186771/100‑1 (MQ=255)
           tatttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACAAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGc                                                                                         <  2:417346/100‑1 (MQ=255)
            atttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGct                                                                                        <  2:2104157/100‑2 (MQ=255)
            atttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGct                                                                                        <  2:1318383/100‑2 (MQ=255)
             tttattAATTAGTTTGTAGATCAAGGTATTGTTAGTGAGATGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGccc                                                                                       <  1:2409251/100‑1 (MQ=255)
             tttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGccc                                                                                       <  1:403990/100‑1 (MQ=255)
             tttattAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGccc                                                                                       <  2:412381/100‑1 (MQ=255)
              ttattaATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACTGTCCTCTTAGctga                                                                                      <  2:3371134/100‑4 (MQ=255)
              ttattaATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGcccc                                                                                      >  2:3295610/1‑100 (MQ=255)
              ttattaATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGcccc                                                                                      <  2:1621699/100‑1 (MQ=255)
                 ttaattaGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTGTTAGCCCcctc                                                                                   <  1:3594976/100‑1 (MQ=255)
                  taattaGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCcctcc                                                                                  <  1:684738/100‑1 (MQ=255)
                    attaGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCtt                                                                                >  2:170950/1‑100 (MQ=255)
                      taGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCGTCGCTATTTTTGGTGCCATCAGCTAATAGGACAGTCCTCTTAGCCCCCTCCttt                                                                               >  1:193164/1‑99 (MQ=255)
                        gTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTccc                                                                            <  1:3863879/100‑1 (MQ=255)
                        gTTTGTAGATCAAGGTACTGTCAGTGAGACGAAAATCCAGGCTTCGCTATGTCTGGTGCCATCAGGTAAGAGGACAGTCCTCTTAGCCCCCTCCGTTccc                                                                            <  1:2869424/100‑1 (MQ=255)
                           tGTAGATCAATGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGGCAGTCCTCTTAGCCCCCTCCTTTCCCCGc                                                                         <  1:2628114/100‑1 (MQ=255)
                           tGTAGATCAAGGTATTGTCGGTGATACGAAAATACAGGATTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGc                                                                         >  1:913113/1‑100 (MQ=255)
                           tGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGc                                                                         <  1:1584705/100‑1 (MQ=255)
                           tGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGc                                                                         <  1:1342074/100‑1 (MQ=255)
                            gTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCt                                                                        <  2:602092/100‑1 (MQ=255)
                              aGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtca                                                                      >  2:2782284/1‑100 (MQ=255)
                              aGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtca                                                                      >  1:339189/1‑100 (MQ=255)
                              aGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtca                                                                      >  2:3184160/1‑100 (MQ=255)
                               gATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtcat                                                                     >  1:3040416/1‑100 (MQ=255)
                               gATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGACATCAGCTAAGAGGACAGTCCTCTTAGCACCCTCCTTTCCCCGCtca                                                                      >  1:2076683/1‑99 (MQ=255)
                                 tCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtcattc                                                                   <  2:3963132/100‑1 (MQ=255)
                                 tCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtcattc                                                                   <  2:1631586/100‑1 (MQ=255)
                                   aaGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtcattcat                                                                 >  2:3307170/1‑100 (MQ=255)
                                   aaGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCtcattca                                                                  >  1:4146369/1‑99 (MQ=255)
                                    aGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTcattcatt                                                                >  1:3279516/1‑100 (MQ=255)
                                    aGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTcattcatt                                                                >  2:1288394/1‑100 (MQ=255)
                                      gTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTaa                                                              >  1:2523718/1‑100 (MQ=255)
                                        aTTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAAc                                                            <  1:1853854/100‑1 (MQ=255)
                                         ttGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACa                                                           <  2:3632161/100‑1 (MQ=255)
                                          tGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACaa                                                          >  1:145140/1‑100 (MQ=255)
                                             cAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATc                                                       >  1:3240138/1‑100 (MQ=255)
                                             cAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATc                                                       <  2:4290133/100‑1 (MQ=255)
                                               gTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCa                                                     >  1:139638/1‑100 (MQ=255)
                                                tGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCAt                                                    <  2:2709978/100‑1 (MQ=255)
                                                 gagaCGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCAtt                                                   >  2:1124621/1‑100 (MQ=255)
                                                 gagaCGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCAtt                                                   <  2:41687/100‑1 (MQ=255)
                                                  agaCGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTg                                                  >  2:3360688/1‑100 (MQ=255)
                                                   gaCGAAAATCCAGGCTTCGCTATTTTTTTTTTTTTTTTCTAAGAGGACAGTCCTCTTCGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGc                                                 >  1:2169615/1‑100 (MQ=255)
                                                   gaCGAAAATCCAGGCTTCGCTATTTTTGGTGCCAGCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGc                                                 <  2:3809762/100‑1 (MQ=255)
                                                    aCGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGcc                                                <  1:3591737/100‑1 (MQ=255)
                                                    aCGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGcc                                                <  2:2749149/100‑1 (MQ=255)
                                                        aaaTCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATaa                                            >  2:2048355/1‑100 (MQ=255)
                                                         aaTCCAGGCTTCGCTATTTTTGTTGCCATCAGCTAAGAGGACAGTCCTCTTAAACCCCTCCTTTCACCGCTCATTCATTAAACAAATCCATTGCCATaaa                                           >  1:3995854/1‑100 (MQ=255)
                                                           tCCAGGCTTCGCTATTTTTGGTGCCATCATCTAAGAGTACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATCAAat                                         >  1:1875001/1‑100 (MQ=255)
                                                            ccAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAata                                        >  2:901049/1‑100 (MQ=255)
                                                            ccAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAata                                        <  2:3040434/100‑1 (MQ=255)
                                                            ccAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAat                                         <  1:3525560/99‑1 (MQ=255)
                                                              aGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAatata                                      <  2:1852155/100‑1 (MQ=255)
                                                                    cGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATaaaaa                                <  1:3346594/100‑1 (MQ=255)
                                                                    cGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATaaaaa                                <  1:3346814/100‑1 (MQ=255)
                                                                    cGCTATTCTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATaaaaa                                >  2:2309140/1‑100 (MQ=255)
                                                                        aTTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTTATTCATTAAACAAATCCATTGCCATAAACTATATAAAAAAGcc                            <  1:820683/100‑1 (MQ=255)
                                                                         tttttGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGccc                           >  2:724661/1‑100 (MQ=255)
                                                                          ttttGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCt                          <  2:1965091/100‑1 (MQ=255)
                                                                              ggTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCt                      <  1:2105176/100‑1 (MQ=255)
                                                                              ggTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCt                      <  1:4376742/100‑1 (MQ=255)
                                                                               gTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCtt                     <  1:724660/100‑1 (MQ=255)
                                                                                tGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCttt                    >  1:1634310/1‑100 (MQ=255)
                                                                                tGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTAATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCtttc                       >  1:3763244/1‑95 (MQ=255)
                                                                                 gCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTc                   <  1:17193/100‑1 (MQ=255)
                                                                                 gCCATAAGCTAAGAGCACAGTCCTATTAGCCCCATCCTACCCCAGCTCATTTATTAAACAAAAAAAAAAAAAAAAAATATATAAAAAAGCCCTTGCTTTc                   <  1:2453082/100‑1 (MQ=255)
                                                                                     tCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTaa                <  1:1772082/99‑1 (MQ=255)
                                                                                      cAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACg              <  1:2231479/100‑1 (MQ=255)
                                                                                       ggCTAAGAGGACTGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGt             >  1:2991696/2‑100 (MQ=255)
                                                                                       ggCTAAGAGGACTGTCCTCTTAGCCCCCTCCTTTCCACGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGt             >  1:4295017/2‑100 (MQ=255)
                                                                                       aGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACgn             <  2:2487909/100‑2 (MQ=255)
                                                                                        gCTAAGAGGACTGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTg            >  2:2387522/1‑100 (MQ=255)
                                                                                        gCTAAGAGGACTGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTg            >  2:1902963/1‑100 (MQ=255)
                                                                                          tAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGaa          <  1:2833032/100‑1 (MQ=255)
                                                                                          tAAGAGGACAGTCCTCTTAGCCAACTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGaa          >  1:1455367/1‑100 (MQ=255)
                                                                                          tAAGAGGACAGTCCTCTTAGCACCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCCTAAAATATATAAAAAAGCCTTTGCTTTCTAACGTGaa          >  1:1307778/1‑100 (MQ=255)
                                                                                            agagGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAg        >  1:1750105/1‑100 (MQ=255)
                                                                                            agagGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAg        <  2:70501/100‑1 (MQ=255)
                                                                                             gagGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAg        >  1:66039/1‑99 (MQ=255)
                                                                                             gagGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGt       >  2:1468873/1‑100 (MQ=255)
                                                                                             gagGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGt       >  2:430177/1‑100 (MQ=255)
                                                                                               ggACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTgg     >  2:2112656/1‑100 (MQ=255)
                                                                                               ggACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTgg     <  2:1913919/100‑1 (MQ=255)
                                                                                                 aCAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGtt   <  2:139638/100‑1 (MQ=255)
                                                                                                 aCAGTCCTCTTAGCACCCTACTTTCCCCGCTCATTCATTGAACAAATCAATTGCAATAACATATATAAAAAAACCCTAGCTTTCTAAAGTGAAAGTgg     >  1:3881905/1‑98 (MQ=255)
                                                                                                   |                                                                                                  
CGTTAATTAACTATTTATTAATTAGTTTGTAGATCAAGGTATTGTCAGTGAGACGAAAATCCAGGCTTCGCTATTTTTGGTGCCATCAGCTAAGAGGACAGTCCTCTTAGCCCCCTCCTTTCCCCGCTCATTCATTAAACAAATCCATTGCCATAAAATATATAAAAAAGCCCTTGCTTTCTAACGTGAAAGTGGTTT  >  NC_000913/2089755‑2089952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: