Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,314,801 G→T 17.7% Q438H (CAG→CAT) ‡ rcsD → phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,314,8010GT17.7% 485.4 / 86.8 192Q438H (CAG→CATrcsDphosphotransfer intermediate protein in two‑component regulatory system with RcsBC
Reads supporting (aligned to +/- strand):  ref base G (75/83);  new base T (20/14);  total (95/97)
Fisher's exact test for biased strand distribution p-value = 2.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01

Only 100 of 202 total aligned reads displayed.

GGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGAT  >  NC_000913/2314702‑2314900
                                                                                                   |                                                                                                   
ggggATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAg                                                                                                     <  1:67555/100‑1 (MQ=255)
ggggATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAg                                                                                                     <  2:2641417/100‑1 (MQ=255)
  ggATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGCTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGa                                                                                                   >  1:3277363/1‑100 (MQ=255)
      tattCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATcgc                                                                                               >  2:4154768/1‑100 (MQ=255)
      tattCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATcgc                                                                                               >  1:2016909/1‑100 (MQ=255)
      tattCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATcgc                                                                                               <  1:1031307/100‑1 (MQ=255)
        ttCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGa                                                                                             >  2:981408/1‑100 (MQ=255)
         tCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCCTGATCGCGaa                                                                                            <  2:2521117/100‑1 (MQ=255)
          cAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCCTGATCGCGaat                                                                                           <  2:2199374/100‑2 (MQ=255)
           aGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGt                                                                                          <  2:2016916/100‑1 (MQ=255)
            ggCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGGCGCGCAGCGCACCCAAATTTTAATTATTCGCGATCAGGGTCACGAAGTg                                                                                         >  1:3814004/1‑100 (MQ=255)
             gCGACGTTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCCTGATCGCGaataat                                                                                        <  1:3659655/100‑5 (MQ=255)
              cgatgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCt                                                                                       <  1:1406636/96‑1 (MQ=255)
              cgacgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCCTGATCGCGaataatg                                                                                       <  1:1337804/100‑6 (MQ=255)
               gacgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTg                                                                                      <  1:3240238/100‑1 (MQ=255)
                 cgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGt                                                                                    >  1:3378678/1‑100 (MQ=255)
                 cgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGt                                                                                    <  2:7777/100‑1 (MQ=255)
                 cgaTCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGt                                                                                    <  1:250824/100‑1 (MQ=255)
                     cAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAAc                                                                                >  1:2864627/1‑100 (MQ=255)
                     cAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCAGGTAAAc                                                                                <  2:2308073/100‑1 (MQ=255)
                       aTAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACaa                                                                              <  2:2150627/100‑1 (MQ=255)
                       aTAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACaa                                                                              <  1:3921003/100‑1 (MQ=255)
                        tAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAg                                                                             <  2:3014346/100‑1 (MQ=255)
                        tAACGAGCCGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAg                                                                             <  2:3911316/100‑1 (MQ=255)
                          aCGAGCTGTATGAGATCCGGATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCCTTATTCGCGACCAGCATCGCGCAGTGCTGATAAACaa                                                                              >  1:4220677/1‑97 (MQ=255)
                           cGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGaaa                                                                          <  1:268202/100‑1 (MQ=255)
                           cGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGaaa                                                                          >  1:4146034/1‑100 (MQ=255)
                            gAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAAc                                                                         <  2:2871122/100‑1 (MQ=255)
                             aGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACt                                                                        <  1:231220/100‑1 (MQ=255)
                              gCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTc                                                                       >  2:3695802/1‑100 (MQ=255)
                                 gTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAg                                                                    >  1:1146471/1‑100 (MQ=255)
                                   aTGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCa                                                                  >  2:3431067/1‑100 (MQ=255)
                                   aTGAGATCCGCATGCTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCa                                                                  <  2:3277381/100‑1 (MQ=255)
                                     gagaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAgg                                                                >  1:478979/1‑100 (MQ=255)
                                     gagaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAgg                                                                <  1:3579579/100‑1 (MQ=255)
                                     gagaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAgg                                                                >  1:873372/1‑100 (MQ=255)
                                      agaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAgg                                                                >  1:1920559/1‑99 (MQ=255)
                                       gaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGgcg                                                              >  1:1579692/1‑100 (MQ=255)
                                       gaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGgcg                                                              >  2:2001201/1‑100 (MQ=255)
                                       gaTCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTAGCGATCAGGATAGCGCAGTGCTGGTAAACAAAAAACTCAAGCAGacg                                                              >  1:1449935/1‑100 (MQ=255)
                                          ccGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAg                                                           >  1:914812/1‑100 (MQ=255)
                                          ccGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAg                                                           <  1:4382841/100‑1 (MQ=255)
                                          ccGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAg                                                           <  2:3044833/100‑1 (MQ=255)
                                            gCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCg                                                         <  2:773172/100‑1 (MQ=255)
                                               tGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGACGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCt                                                      >  1:3108163/1‑100 (MQ=255)
                                               tGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCt                                                      <  2:1460654/100‑1 (MQ=255)
                                                 ttCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGt                                                    <  2:2508165/100‑1 (MQ=255)
                                                  tCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTa                                                   >  1:3038692/1‑100 (MQ=255)
                                                  tCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTACTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTa                                                   >  1:4411343/1‑100 (MQ=255)
                                                   ccGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTAt                                                  >  2:3792365/1‑100 (MQ=255)
                                                   ccGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTAt                                                  >  2:555564/1‑100 (MQ=255)
                                                    cGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATg                                                 <  1:4401370/100‑1 (MQ=255)
                                                    cGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATg                                                 <  2:3347175/100‑1 (MQ=255)
                                                       aGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATgaga                                              <  1:3776382/100‑1 (MQ=255)
                                                        gCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGTAGGCGCAGCGTCTGTATGAGaa                                             <  1:2566075/100‑1 (MQ=255)
                                                        gCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGaa                                             >  1:22115/1‑100 (MQ=255)
                                                           aGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGaaaaa                                          <  1:743197/100‑1 (MQ=255)
                                                           aGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGaaaaa                                          <  1:1525980/100‑1 (MQ=255)
                                                             gTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAAcc                                        <  2:33231/100‑1 (MQ=255)
                                                             gTCGCGCCGCGCACACAAATTTTCATTATTCGCGACCAGGATGGCGAAGTGTTGGTAAACAAGAACCTCAAGCAGGCGCAGCGTCTGTATGAGAAAAAcc                                        <  1:1074710/100‑1 (MQ=255)
                                                                  gccgcgcACACAAATTTTCATTATTCGCGTTCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACcagcag                                   >  1:621971/1‑100 (MQ=255)
                                                                  gccgcgcACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACcagcag                                   >  2:2693176/1‑100 (MQ=255)
                                                                   ncgcgcACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAgg                                  >  1:2244416/2‑100 (MQ=255)
                                                                       gcACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCg                              <  1:3548205/100‑1 (MQ=255)
                                                                          cacaAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTACGAGAAAAACCAGCAGGGGCGgat                           >  2:1363115/1‑100 (MQ=255)
                                                                              aaTTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATc                       <  2:1237741/100‑1 (MQ=255)
                                                                               aTTTTCATTATTCGCGATCAGGATCGCCAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTAAAAAAAAAAAAAACCAGCAGGGGCGGATGATCt                      <  1:1240942/100‑1 (MQ=255)
                                                                                  ttCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTa                   <  1:167415/100‑1 (MQ=255)
                                                                                  ttCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTa                   >  2:639892/1‑100 (MQ=255)
                                                                                  ttCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTa                   <  2:1017691/100‑1 (MQ=255)
                                                                                  ttCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTa                   <  2:3171134/100‑1 (MQ=255)
                                                                                    cATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATg                 <  1:3957540/100‑1 (MQ=255)
                                                                                    cATTATTCGCCATCAGGATCGCGAAGTGCTAGTATACAAGAAACTCAAGCAGGCGCTGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATg                 <  1:973557/100‑1 (MQ=255)
                                                                                    atctcttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATg                 <  2:3974230/95‑1 (MQ=255)
                                                                                    agcacttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTAt                  >  1:3140534/6‑99 (MQ=39)
                                                                                     gcacttCGCGATCCTGATCGCGACGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGa                >  1:1096365/5‑100 (MQ=255)
                                                                                     gcacttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGa                >  2:3658820/5‑100 (MQ=255)
                                                                                       acttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaa              >  2:4022349/3‑100 (MQ=255)
                                                                                        cttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  1:2833745/2‑100 (MQ=255)
                                                                                        cttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  2:1546267/2‑100 (MQ=255)
                                                                                        cttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  2:1939616/2‑100 (MQ=255)
                                                                                        cttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  2:411528/2‑100 (MQ=255)
                                                                                        cttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  1:2340623/2‑100 (MQ=255)
                                                                                        cagcgcgATCGTGATCGCGAAGTGCTGGTAAGCAAGAAACTGAAGCAGGCGTAGCGTCTGTATGAGAAAAACCAGCAGGTGCGGGTGTTCTTTATGaaaa             <  1:2089795/97‑1 (MQ=255)
                                                                                        attCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             <  2:126707/100‑1 (MQ=255)
                                                                                        attCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaa             >  2:246057/1‑100 (MQ=255)
                                                                                         ttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGACAAACCAGCAGGGGCGGATGATCTTTATGaaaaa            >  1:4104881/1‑100 (MQ=255)
                                                                                         ttCGCGATCCTGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGaaaaa            >  2:483589/1‑100 (MQ=255)
                                                                                          tagcgATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAAc           <  2:3228071/98‑1 (MQ=255)
                                                                                          tCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAAc           <  2:1075605/100‑1 (MQ=255)
                                                                                          tCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAAc           >  1:2750342/1‑100 (MQ=255)
                                                                                           cgcgATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACa          >  1:1711202/1‑100 (MQ=255)
                                                                                              gATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTCTGAAAAACCTTg       >  1:1851737/1‑100 (MQ=255)
                                                                                               aTCAGGATGGCGAAGTGATGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTgt      <  1:1705200/100‑2 (MQ=255)
                                                                                                tCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGc     <  2:3376422/100‑1 (MQ=255)
                                                                                                tCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGc     <  2:4368453/100‑1 (MQ=255)
                                                                                                 cAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCg    >  1:1997746/1‑100 (MQ=255)
                                                                                                 cAGGATCGCGAAGTGCTAATAAACAAGAAACGCAAGCAGGCGCAGAAAAAAAAAAAAAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGc     <  1:4311877/99‑1 (MQ=255)
                                                                                                   ggATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAGAAACATTGGCGAt  >  2:1172720/1‑100 (MQ=255)
                                                                                                   ggATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGAt  >  1:1820333/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGAT  >  NC_000913/2314702‑2314900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: