| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,483,900 | T→A | 17.5% | V49D (GTC→GAC) | evgA → | response regulator in two‑component regulatory system with EvgS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,900 | 0 | T | A | 17.5% | 385.8 / 69.0 | 160 | V49D (GTC→GAC) | evgA | response regulator in two‑component regulatory system with EvgS |
| Reads supporting (aligned to +/- strand): ref base T (71/61); new base A (14/14); total (85/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
TTCGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGCTA > NC_000913/2483801‑2483998 | cGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGtca > 2:4105546/1‑100 (MQ=255) cGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGtca > 2:3396763/1‑100 (MQ=255) cGTAATTGAGTGATCAAAAACGATATTGAAATCTTAGTAGAGTTTACTGAAGGCGGAAGTGCCCTTCAGCGGGTGGAAACACTTAAGCCTGATATCGt < 1:1104922/98‑1 (MQ=255) tAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGtcatc < 2:3080148/100‑1 (MQ=255) tATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGa > 2:1220753/1‑100 (MQ=255) tATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGa > 1:4335510/1‑100 (MQ=255) tATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGa < 1:4020486/100‑1 (MQ=255) tATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGa < 1:190513/100‑1 (MQ=255) ttaagcAAATACGATATTGAAATCTTAGCAGAGTTTACTGAATGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTTAGCCTGATATCGTCATCATTGATg < 1:4021592/95‑1 (MQ=255) ttGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAAAACTTAAGCCTGATATCGTCATCATTGATg > 1:4306957/1‑100 (MQ=255) tGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGt > 1:627451/1‑100 (MQ=255) tGAGCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCTGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGt < 1:480606/100‑1 (MQ=255) gATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTc > 2:1121331/1‑100 (MQ=255) gATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTc > 1:4170350/1‑100 (MQ=255) gATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTc > 2:570329/1‑100 (MQ=255) aTCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCg > 1:283132/1‑100 (MQ=255) tCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGa > 1:653952/1‑100 (MQ=255) tCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGa > 1:1373463/1‑100 (MQ=255) tCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGa < 1:1450513/100‑1 (MQ=255) cAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGat > 2:1985138/1‑100 (MQ=255) cAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGat > 1:3696387/1‑100 (MQ=255) cAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGat > 2:44491/1‑100 (MQ=255) aaaaaCGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGata < 1:1733791/100‑1 (MQ=255) aaaaaCGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGata < 2:2777764/100‑1 (MQ=255) aaaaCGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGatat > 2:188921/1‑100 (MQ=255) aaaaCGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGatat < 2:600341/100‑1 (MQ=39) aaaCGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATc < 1:2659585/100‑1 (MQ=39) cGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcagg < 1:2072330/100‑4 (MQ=38) cGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcagg < 2:2374495/100‑4 (MQ=38) cGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcag < 2:1466193/99‑3 (MQ=38) gATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCg > 1:3020944/1‑100 (MQ=255) gATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcaggc < 2:3578902/100‑5 (MQ=38) gATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcaggc < 2:3429799/100‑5 (MQ=38) gATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcagg < 1:4120332/99‑4 (MQ=38) atatTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCgg < 1:3141465/100‑1 (MQ=255) atatTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCgg < 2:2018603/100‑1 (MQ=255) atatTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGACATCAATGATGACGATATcaggct < 2:580523/100‑6 (MQ=37) atTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAg < 2:3984148/100‑1 (MQ=255) tGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGGTATCGTCATCATTGATGTCGATATCCCCGGAGtt > 1:2325059/1‑100 (MQ=255) aaaTCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTaa > 1:2251376/1‑100 (MQ=255) aaTCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAAc < 1:398226/100‑1 (MQ=255) aaTCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAAc < 2:3573491/100‑1 (MQ=255) tCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCCGCGGGTGGAAACCCATAAGCCTGATATCCTCATCATTGCTGTCGATATtccacgagctga > 1:4357082/1‑88 (MQ=255) cTTATCAGAATGAACCGAAGCCTGAAGTGCCGTTTAGCTTTGGCAAACACTTAAGCCTGATATCGTCATTATTGACGTCGCGACCCCTGGAGTTAACgg < 1:175868/99‑1 (MQ=255) cTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGt > 2:2165840/1‑100 (MQ=255) gCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATGGATGTCGAAATCCCCGGAGTTAACGGTATcc > 1:2975756/1‑100 (MQ=255) agTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGgt < 1:2157843/100‑1 (MQ=255) agTTGACTGAAGGCGGAAGTGCCGTTCAGCGAGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGgt < 1:4236509/100‑1 (MQ=255) gTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGgtg < 2:3253235/100‑1 (MQ=255) gTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGgtg > 1:566126/1‑100 (MQ=255) ttGACTGAAGGCGGAAGTGCCGTTCAGCGTGTGGAAACACTTAAGCCTTATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGgtgt < 1:2020132/100‑1 (MQ=255) aCTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAg < 2:975425/100‑1 (MQ=255) aCTGAAGGCGGAAGCGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAg > 2:4264924/1‑100 (MQ=255) cTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGa > 1:223560/1‑100 (MQ=255) tGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGaa < 1:1493715/100‑1 (MQ=255) gAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATACAGGTGTTAGaaa > 1:1445479/1‑100 (MQ=255) aaGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAAc < 1:2285511/100‑1 (MQ=255) aGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACg > 2:3330080/1‑100 (MQ=255) ggCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGc < 2:134253/100‑1 (MQ=255) ggCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGc > 2:3203123/1‑100 (MQ=255) tGCGGTTGAGCGGGTGGAAACACTTAATCCGGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAg < 2:3997176/96‑1 (MQ=255) tGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAg > 2:3622349/1‑100 (MQ=255) gCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAgc > 1:1707150/1‑100 (MQ=255) gCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAgc > 2:384804/1‑100 (MQ=255) ccGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAgcg < 1:1207209/100‑1 (MQ=255) cGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAgcgc > 1:2425371/1‑100 (MQ=255) gTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGcc < 2:693287/100‑1 (MQ=255) gTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGcc < 2:2696772/100‑1 (MQ=255) tCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCaa > 2:1796620/1‑100 (MQ=255) aGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAata > 1:978203/1‑100 (MQ=255) ngTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCACCAATATAGc > 2:3579285/2‑100 (MQ=255) tGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCgg < 2:2286629/100‑1 (MQ=255) cacTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattat > 2:3357920/1‑100 (MQ=255) cacTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattat > 1:4034341/1‑100 (MQ=255) cTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattatta < 2:2130994/100‑1 (MQ=255) cTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattatta < 2:3020962/100‑1 (MQ=255) ttAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattattat < 2:4269884/100‑1 (MQ=255) ttAAGCCTGATATCGTCATCATTGATGTCAATATCCCCGGAGTTAACGGTATACAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattatta < 1:348996/99‑1 (MQ=255) ctccggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattattatt > 1:3741614/8‑100 (MQ=37) ctccggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAattattatt < 2:3741640/93‑1 (MQ=37) ccggggATATCGACATCAATGATGACGATATCTCCGGAGTTAACGGTATCCAGGTGTTAGAAACGATGAGGAAGCGCCAATATAGGTGAATtattattat > 1:13924/6‑100 (MQ=25) ccggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATtattattat > 2:1078194/6‑100 (MQ=38) aGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATtattattat > 2:2223639/1‑100 (MQ=255) gCCTGATATCGTCATGATAGAGGACGATATGCCCTGAGGTAACGGAAGCCAGGTGCTAGAAACGCTGAGGAAGAGACAATATAGCGGAattgtta > 1:1465381/1‑95 (MQ=255) gCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTCTCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGAGGAattatcattatc > 1:3496286/1‑100 (MQ=255) cggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATc > 2:3535612/5‑100 (MQ=38) cggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATc > 1:3264787/5‑100 (MQ=38) cggggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATc > 2:2415965/5‑100 (MQ=38) ccTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCg < 2:2577172/100‑1 (MQ=255) ccTGATATCGTCATCATTGATGTCGATATCAACGGAGTTAACGGTATCCAGGTGTTAGAAACGCAGAGGAAGCGCCAATATAGCGGAATTATTATTATc > 1:1991469/1‑99 (MQ=255) ggATATCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGACAATATAGCGGAATTATTATTATCGtc > 1:3169344/2‑100 (MQ=38) agATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGAGTTAGAAACGCTGAGGAGGCGACAATATAGTGGAATTATTATTATCg > 1:2146136/2‑98 (MQ=255) gATATCGTCATCATTAATGTCAATATCCCCGGAGTTAACGGTAACCAGGTGTTATAAACGCAAAGGAAGCGCAAATATAGCGGAATTATTATTATCGt > 1:3618377/1‑98 (MQ=255) tatCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTcc > 1:3138656/1‑100 (MQ=255) tatCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTcc < 1:2086068/100‑1 (MQ=255) tatCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGt > 1:106585/1‑96 (MQ=39) tatCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTcc > 2:2773531/1‑100 (MQ=255) atCGACATCAATGATGACGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCg > 1:4073365/1‑100 (MQ=255) tCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGc > 2:2277329/1‑100 (MQ=255) cGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCGCCGCt > 2:380213/1‑100 (MQ=255) | TTCGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGCTA > NC_000913/2483801‑2483998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |