| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,856,887 | C→T | 32.3% | intergenic (‑81/‑206) | ygbA ← / → mutS | uncharacterized protein/methyl‑directed mismatch repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,856,887 | 0 | C | T | 32.3% | 206.6 / 140.3 | 168 | intergenic (‑81/‑206) | ygbA/mutS | uncharacterized protein/methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base C (51/62); new base T (29/25); total (81/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
AGATACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTTCGCTT > NC_000913/2856788‑2856986 | gaTACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGcc > 2:1272455/1‑100 (MQ=255) tACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCaa > 2:397851/1‑100 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAAcc > 1:992016/1‑100 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAcc < 2:3760423/100‑1 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGACAAcc > 1:2814451/1‑100 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGC‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAAcc > 1:2356933/1‑100 (MQ=255) cTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGa < 2:1293015/100‑1 (MQ=255) cTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGa > 2:2028985/1‑100 (MQ=255) tGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATa < 2:3895569/100‑1 (MQ=255) tGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATa > 2:3288288/1‑100 (MQ=255) gCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATAc > 2:1228722/1‑100 (MQ=255) cGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACaa > 2:1360424/1‑100 (MQ=255) aCATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAAttt < 1:1335/100‑1 (MQ=255) cATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAAtttt > 2:3638123/1‑100 (MQ=255) tgctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGc > 1:563922/1‑100 (MQ=255) tgctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTg > 1:3105759/1‑99 (MQ=255) tgctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGc < 2:2111005/100‑1 (MQ=255) gctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACGCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCg < 1:2730076/100‑1 (MQ=255) ctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGt > 2:2960822/1‑100 (MQ=255) ctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGt < 2:3060556/100‑1 (MQ=255) ctgcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGATAGTCAACCGATACAATTTTGCGt > 2:1775203/1‑100 (MQ=255) gcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTAc < 2:2005345/100‑1 (MQ=255) gcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTAc > 1:4357027/1‑100 (MQ=255) gcCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTAc > 2:2787843/1‑100 (MQ=255) tCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTg < 2:4146808/100‑1 (MQ=255) tCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTg > 1:3382422/1‑100 (MQ=255) ccACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTgt < 1:38835/100‑2 (MQ=255) ccACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGc < 2:3369520/100‑1 (MQ=255) aCCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCtt > 1:2287201/1‑100 (MQ=255) ccTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTc < 2:1364654/100‑1 (MQ=255) cTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCa > 2:4358455/1‑100 (MQ=255) cTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAAGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCa > 1:1269663/1‑100 (MQ=255) tCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCGAAAGAAGAAGGGTTAGTCAACAGATACAATTTTACGTACTTGCTTCAt > 1:2604654/1‑100 (MQ=255) agaTTAAGATGTAATATAAA‑TACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCAt > 1:4292633/3‑100 (MQ=37) gaTTAAGATGT‑AATATAAATACATCTTAATCTTAAAGGACACTATGACTCCAAAGAAGAAGGGTTAGCCAACAGATACAATTCTTCGAACTCGc > 1:1534324/2‑94 (MQ=21) cATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATa < 2:2152964/100‑1 (MQ=255) cATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATa < 2:2703299/100‑1 (MQ=255) cATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATa < 2:2247303/100‑1 (MQ=255) aTTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATaa > 1:444915/1‑100 (MQ=255) aTTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATaa < 2:4253030/100‑1 (MQ=255) ttAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAg < 1:2865300/100‑1 (MQ=255) tAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGc < 2:3734097/100‑1 (MQ=255) tAAGATGT‑ATTTATATGACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAg < 2:719710/99‑1 (MQ=255) aaGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCa < 1:1669980/100‑1 (MQ=255) aTGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCa > 2:408245/1‑100 (MQ=255) gT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACg < 1:3514573/100‑1 (MQ=255) gT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACg < 2:2599269/100‑1 (MQ=255) t‑ATTTATATTACATCTTAATCTTAAAGGGCACTCTGACTCCAAAGAACTAGGGTTAGCCGACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc < 1:139024/100‑1 (MQ=255) t‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc > 1:1009716/1‑100 (MQ=255) t‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc > 2:1008062/1‑100 (MQ=255) t‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc < 2:3709606/100‑1 (MQ=255) t‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc > 2:2050949/1‑100 (MQ=255) aTTTATATTACATCGTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCa < 1:1442295/100‑1 (MQ=255) tttATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCaa > 1:1114241/1‑100 (MQ=255) ttATATTACCTCTTACTCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCaaa < 1:37787/100‑1 (MQ=255) ttATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCaaa < 2:1210041/100‑1 (MQ=255) tataTTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCaaaa > 1:430499/1‑100 (MQ=255) atatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAg < 1:3174148/100‑1 (MQ=255) tatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGTGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGc < 1:1544871/100‑1 (MQ=255) tatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGc < 2:664118/100‑1 (MQ=255) tatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGc < 1:2634472/100‑1 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg < 2:910915/100‑1 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg < 2:804445/100‑1 (MQ=255) cATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaa < 1:3852432/100‑1 (MQ=255) atcttaatcttaAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGATTCATAAGCATCACGCAAAAGGTGCaaa > 2:3625720/1‑100 (MQ=255) tcttaatcttaaAGGGCACTATGACTCCAAAGAAGGAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 2:1090184/1‑100 (MQ=255) tcttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 1:4055331/1‑100 (MQ=255) cttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAAc < 2:182455/100‑1 (MQ=255) taatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAg < 2:3922663/100‑1 (MQ=255) taatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAg < 2:4301478/100‑1 (MQ=255) taatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAg < 1:1350037/100‑1 (MQ=255) aatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGc > 1:1924183/1‑100 (MQ=255) aatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGc > 2:3131053/1‑100 (MQ=255) cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc > 1:7341/1‑100 (MQ=255) aaGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTc < 2:444916/100‑1 (MQ=255) aaGGGCACTATGACTCCAAAGAAGAAGGGTTAACCAACCGATACAATTTTGTGTACTTGCTTCATAAGCATCACGCAAAAGTTGCAAAACAGCATCTTTc > 1:3045611/1‑100 (MQ=255) ggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg > 1:3601951/1‑100 (MQ=255) ggCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg < 1:1869151/100‑1 (MQ=255) tGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAg < 1:2627273/100‑1 (MQ=255) aCTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCa < 2:2702525/100‑1 (MQ=255) aCTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCa < 2:3057527/100‑1 (MQ=255) cTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCAt > 2:3519293/1‑100 (MQ=255) cTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCAt > 1:1360819/1‑100 (MQ=255) tCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATc > 1:3790605/1‑100 (MQ=255) ccAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAgagatc > 1:2069174/1‑95 (MQ=255) ccAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCa > 1:3127390/1‑100 (MQ=255) ccAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCa > 1:1273680/1‑100 (MQ=255) ccAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTATCCCGGAACCAGCATCa > 1:823539/1‑100 (MQ=255) ccAAAAAAGAAGGGTTAGCCAACATATAGAATTTTGCGTACATGGTTAATAAGTATCACGAAAAAGCTTCAAAACAGCATCTTTAACGTAACCAga > 1:3645553/1‑95 (MQ=255) cAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCaa > 1:4289574/1‑100 (MQ=255) aagaagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGa < 1:2857530/100‑1 (MQ=255) aagaagaagGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCTGGAACCAGCATCAAGa < 2:1962290/100‑1 (MQ=255) aagaagaagGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGa < 1:1165564/100‑1 (MQ=255) agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTc < 1:2312731/100‑1 (MQ=255) agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTc > 2:1762558/1‑100 (MQ=255) aagGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGc < 1:1987180/100‑1 (MQ=255) agGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCACCAAGAACTCGcc > 1:3942699/1‑100 (MQ=255) ggTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt > 2:2192720/1‑100 (MQ=255) ttAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTTc < 1:3807542/100‑1 (MQ=255) tAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTTCg > 2:3207772/1‑100 (MQ=255) | AGATACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGT‑ATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTTCGCTT > NC_000913/2856788‑2856986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |