| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 420,470 | A→G | 41.7% | T294A (ACG→GCG) | brnQ → | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 420,470 | 0 | A | G | 41.7% | 75.9 / 194.2 | 163 | T294A (ACG→GCG) | brnQ | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| Reads supporting (aligned to +/- strand): ref base A (47/48); new base G (35/33); total (82/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
CAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGG > NC_000913/420372‑420569 | cAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAAc > 2:801763/1‑100 (MQ=255)cAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAAc < 2:642107/100‑1 (MQ=255) aaaCGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCg < 1:451849/100‑1 (MQ=255) aaCGGCGCTCCAATTCTGCATGCTTACGTGCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTTGCTGCGTTAATCTTCATCGCCTGCCTGGTAACg < 1:2894694/99‑1 (MQ=255) aCGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGc < 1:4010831/100‑1 (MQ=255) cgcTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGtt > 2:3536785/1‑100 (MQ=255) gctgctATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTg > 1:962298/1‑100 (MQ=255) ctgctATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTg > 1:778250/1‑99 (MQ=255) gctATTCTGCATGCTTACGTTCAGCACTCCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGACTGGTAAAGGCAGCTGGcc < 1:231555/100‑1 (MQ=255) gctATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGcc < 1:1020320/100‑1 (MQ=255) gctATTCTGCATGCTTACGTCCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGcc > 2:2289643/1‑100 (MQ=255) gctATGCTGCATGCTTACGTTCAGCACACCTTGGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGcc < 2:1607690/100‑1 (MQ=255) ctATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTCGCCt > 1:3585881/1‑100 (MQ=255) ctATGCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAACTTCCTGCTGGCGGCGTTAATCTTCATCGCCTACCTGGTAGCGGCAGTTGGcc < 1:2687939/99‑1 (MQ=255) tATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTg < 1:1962247/100‑1 (MQ=255) aTTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGa > 1:1989431/1‑100 (MQ=255) tCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGAcc < 1:2642871/100‑1 (MQ=255) tCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGAcc < 2:900861/100‑1 (MQ=255) tCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCACCTGCCTGGTAGCGGCAGTTGGCCTGAcc < 1:130330/100‑1 (MQ=255) cTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTACTCTTCATCTCCCGCCTGGTAACGGCAGTTGGCCCGAcc > 2:506449/1‑99 (MQ=255) cTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCt > 2:709900/1‑100 (MQ=255) aTGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGc < 1:2491549/100‑1 (MQ=255) aTGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGc < 1:944798/100‑1 (MQ=255) aTGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGc > 2:2428939/1‑100 (MQ=255) aTGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGc < 2:2417415/100‑1 (MQ=255) tGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCt < 2:3054421/100‑1 (MQ=255) tGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCt > 1:345244/1‑100 (MQ=255) gCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCtt > 2:2056474/1‑100 (MQ=255) cTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTtg > 2:871510/1‑100 (MQ=255) cTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTtg > 2:4353878/1‑100 (MQ=255) ttACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTtgt < 1:3617136/100‑1 (MQ=255) aCGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGc < 2:390781/100‑1 (MQ=255) aCGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCCGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTtgtac < 2:1837421/100‑3 (MQ=255) cGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCa > 2:3460106/1‑100 (MQ=255) gtccAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAg < 1:2289633/97‑1 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAg < 1:1926187/100‑1 (MQ=255) gTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAg > 1:1727770/1‑100 (MQ=255) cAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAAt < 2:1155723/100‑1 (MQ=255) cAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAAt < 2:4214733/100‑1 (MQ=255) aGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAAtt > 1:3030184/1‑100 (MQ=255) aGCACACCTTTGGCGGCGGCGGTAGCTTACTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGCTAACGGCAGTTAGCCTGACCTGTGCTTGTGCAGAAtt > 2:3411731/1‑100 (MQ=255) cacaCCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCt > 2:2092107/1‑100 (MQ=255) acacCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCtt > 2:2804889/1‑100 (MQ=255) cacCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCttt > 1:2264585/1‑100 (MQ=255) ccTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGc < 2:486771/100‑1 (MQ=255) ccTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGc > 2:1222505/1‑100 (MQ=255) ccTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAAGTCTTTGc < 1:504735/100‑1 (MQ=255) ccTTTGGCGGAGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGc > 1:4049570/1‑100 (MQ=255) tGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAg < 2:345245/100‑1 (MQ=255) ggcggcggcGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgt < 1:1384287/100‑1 (MQ=255) gcggcggcgGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCCGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgta < 2:1470977/100‑1 (MQ=255) cggcggcggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgtac < 2:3988063/100‑1 (MQ=255) cggcggcggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgtac > 1:2086977/1‑100 (MQ=255) ggcggcggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgtacg > 2:1114970/1‑100 (MQ=255) ggcggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgtacgtac < 2:2166802/100‑1 (MQ=255) ggcggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAgtacgtac < 2:2557722/100‑1 (MQ=255) cggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCg > 2:1017073/1‑100 (MQ=255) ggTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGc < 2:4181048/100‑1 (MQ=255) gTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGct > 2:3764030/1‑100 (MQ=255) aGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctct < 2:4213830/100‑1 (MQ=255) gCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctc < 1:605359/100‑1 (MQ=255) gCTTCCTGCTGGCAGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctc > 2:2964345/1‑100 (MQ=255) ttCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCtt > 2:3192074/1‑100 (MQ=255) ccTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTAt < 2:665939/100‑1 (MQ=255) ccTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTAt > 1:822399/1‑100 (MQ=255) ctgctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATc > 1:38048/1‑100 (MQ=255) ctgctgGCGGCGTTAATCTTCATCGCCCGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATc < 1:1515734/100‑1 (MQ=255) tgctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCg > 2:3755542/1‑100 (MQ=255) tgctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCg > 1:1397266/1‑100 (MQ=255) gctgGCGGCGTTAATCTTCATCGCCGGCCTGGTAACGTCAGTTGGTCGGCCCTGTGCGTGTGTAGAAGTCTTTGCCCAGTACTTGCCGCTCGCTTa < 1:2389963/96‑1 (MQ=255) ctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTa > 1:725653/1‑100 (MQ=255) ctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGATTGTGCAGAATTCTTTGCCAAGTACGTACCGCTCTCTTATCGTa > 1:3944303/1‑100 (MQ=255) ctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctctagatcgg > 1:2539937/1‑93 (MQ=255) ctgGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGGTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACAGCTCTCTTATCGTa > 1:120705/1‑100 (MQ=255) tgGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTAc > 1:3334623/1‑100 (MQ=255) gcggcgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGc < 2:2522434/100‑1 (MQ=255) cggcgTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCt > 1:3722894/1‑100 (MQ=255) ggcgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTg < 2:1408684/100‑1 (MQ=255) gcgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTgg < 1:1549266/100‑1 (MQ=255) gcgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTgg > 1:1300203/1‑100 (MQ=255) cgTTAATCTTCATCGCCTGCCTGGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTg > 2:848584/1‑98 (MQ=255) cgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGgt > 1:1015548/1‑100 (MQ=255) cgTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGgt > 1:3452030/1‑100 (MQ=255) tAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGtt < 1:55728/100‑1 (MQ=255) aaTCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGttt < 1:4075936/100‑1 (MQ=255) tCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTAt < 1:675818/100‑1 (MQ=255) ttCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATcc < 2:1562245/100‑1 (MQ=255) gcctgcctGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTcggcg > 2:1130408/1‑100 (MQ=255) tgcctgGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCt > 1:627121/1‑100 (MQ=255) ctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTtct > 1:4015300/1‑100 (MQ=255) ctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTtct < 2:2239159/100‑1 (MQ=255) tgGTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATGCTTTGCCCAGGACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTtctc < 1:1712343/100‑1 (MQ=255) tgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCGAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTtctc > 1:2380669/1‑100 (MQ=255) ggTAGCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCg > 2:655645/1‑100 (MQ=255) ggTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCg > 1:4216611/1‑100 (MQ=255) tAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGAt < 2:3488560/100‑1 (MQ=255) tAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGAt < 2:3474215/100‑1 (MQ=255) aaCGGCAGTTGGCCTGACCTGTGCTTGTGCAGACTTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGCtg > 2:2795860/1‑100 (MQ=255) aaCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGAtg > 2:3584599/1‑100 (MQ=255) aCGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGAtgg < 2:3859552/100‑1 (MQ=255) | CAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGG > NC_000913/420372‑420569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |