| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 887,393 | T→A | 18.3% | intergenic (‑54/‑30) | ybjJ ← / → rcdA | putative drug efflux MFS transporter, inner membrane protein/transcriptional regulator of csgD and ybiJI; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 887,393 | 0 | T | A | 18.3% | 401.0 / 74.0 | 168 | intergenic (‑54/‑30) | ybjJ/rcdA | putative drug efflux MFS transporter, inner membrane protein/transcriptional regulator of csgD and ybiJI; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (80/57); new base A (14/17); total (94/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
CCCAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAACT > NC_000913/887294‑887490 | cccAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAtt < 1:2880250/100‑1 (MQ=255)cccAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAtt < 1:1328959/100‑1 (MQ=255) cAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTg < 2:2858562/100‑1 (MQ=255) cAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTg > 2:4131010/1‑100 (MQ=255) cAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTg > 1:346832/1‑100 (MQ=255) cAGGTTCGGCGTGTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTg < 2:2414717/100‑1 (MQ=255) aGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTCGCAAGGTTGTGTACATTTGt < 1:2699245/100‑1 (MQ=255) ggTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTa > 1:3701178/1‑100 (MQ=255) ggTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTa > 2:2666193/1‑100 (MQ=255) ggTTCGGCGTTTCAAGGCATTAGGTGAAGAATTTACGGGCATAGATCAAGTCAAAATAAGAAGAGAAAAGACAGAAGTAGCAAGGGTGGGTAGAtgtg > 1:3673830/1‑98 (MQ=255) gTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTac > 1:2017557/1‑100 (MQ=255) gTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTac < 1:1532441/100‑1 (MQ=255) ntCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTaca > 2:3477154/2‑100 (MQ=255) ggCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACaa > 2:836606/1‑100 (MQ=255) ggCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACaa > 1:295993/1‑100 (MQ=255) ggCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaa < 2:1904765/100‑1 (MQ=255) gggTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 2:2280531/98‑2 (MQ=255) gCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGTTTGTGTACAAATGTACACaac < 1:959889/100‑2 (MQ=255) gCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 1:2953059/100‑2 (MQ=255) gCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 1:2850050/100‑2 (MQ=255) gTTTCAATGCATTACGTGAAGAATTTTCGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaacct < 1:3908426/100‑4 (MQ=255) gTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTg < 1:490411/100‑1 (MQ=255) gTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTg < 2:2945433/100‑1 (MQ=255) tttCAATGCATTACGTGAAGAATTTACGGTCATAGATCATGGCAAACTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaacct < 1:3605552/99‑4 (MQ=255) tttCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGc < 1:4367428/100‑1 (MQ=255) tttCAATGCATTACGTGAAGAATTTACGGTCAAAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGc > 2:4191540/1‑100 (MQ=255) ttCAATGCATTACGTGAAGAAGTTACGGTCATATATCACGTCAAAATAAGAAGATGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaacc < 1:613755/97‑3 (MQ=255) tCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCan < 1:283234/100‑2 (MQ=255) tCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCag < 2:124909/100‑1 (MQ=255) tCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCag < 2:4180097/100‑1 (MQ=255) tCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCag < 1:620164/100‑1 (MQ=255) cAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCaga > 1:3798884/1‑100 (MQ=255) cAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCag > 2:850201/1‑99 (MQ=255) cAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaaccttgct < 1:3584854/100‑8 (MQ=38) cAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaaccttgct < 2:3802457/100‑8 (MQ=38) aaTGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagag > 1:1705141/1‑100 (MQ=255) cATTACGTGCAGAATTTACGGTGATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATATGTACCCAATTCCagagaga > 1:248040/1‑99 (MQ=255) cATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagagagag < 2:399755/100‑1 (MQ=255) ttACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGa < 2:2086586/100‑1 (MQ=255) gTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATg > 2:1516766/1‑100 (MQ=255) tGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGa > 2:3632417/1‑100 (MQ=255) tGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGa > 1:4204261/1‑100 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc < 2:600197/100‑1 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc > 2:1360545/1‑100 (MQ=255) gaaCTTACGGTCATAGATCACGTCAAAAGAATAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATg < 2:4398419/100‑1 (MQ=255) aaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGc < 2:1057820/100‑1 (MQ=255) aTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGGCAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCg < 2:3516637/100‑1 (MQ=255) ttACGGACATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACCATTACAGAGAGAGGAAATGAAATGCGTc > 1:4393366/1‑100 (MQ=255) cGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTcgcg > 2:3527923/1‑100 (MQ=255) cGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTcgcg > 2:1293821/1‑100 (MQ=255) gTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCt < 2:1380453/100‑1 (MQ=255) cATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGGGGAAATGACATGCGTCGCGCTaa > 1:3406248/1‑100 (MQ=255) cATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTaa > 1:1120830/1‑100 (MQ=255) aTAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAAc < 2:3548679/100‑1 (MQ=255) tAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACg > 2:909503/1‑100 (MQ=255) tAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGAAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGCAATCACATGCGTCGCGCTAAc > 1:1316810/1‑99 (MQ=255) gATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGAt > 1:836914/1‑100 (MQ=255) aTCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACg > 1:4156903/1‑97 (MQ=255) cGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCa > 2:1264151/1‑100 (MQ=255) cGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCa > 1:2398474/1‑100 (MQ=255) cGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCa < 1:187634/100‑1 (MQ=255) gTCCAAATATGAAAAGGGTAGACAACATTAGCAAGGATTTGTACATTTGAACACAACTTCAGATTGAGGAAATGACAAACGTCGCGCTAActaacc > 1:125071/1‑91 (MQ=255) tCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAAc < 1:2229660/100‑1 (MQ=255) cAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACg > 1:563072/1‑100 (MQ=255) aTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCga < 2:2652467/100‑1 (MQ=255) tAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCgag < 2:2186434/100‑1 (MQ=255) agaagaGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGaa > 2:1478421/1‑100 (MQ=255) agaagaGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGaa > 1:857420/1‑100 (MQ=255) gaagaGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGAAACGGCGAGaaa > 1:350517/1‑100 (MQ=255) taaGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCATAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGAGAGAAAAAATTAt > 1:1911775/2‑100 (MQ=255) acaacaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAg < 1:2114995/100‑1 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACTCAATTGCAGAGAGAGGAAATGACATGCGTAGCGCTAACGATCCGACACGGCGAGAAACAATTATCCAGGcc > 1:2667315/1‑100 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGcc > 1:1054641/1‑100 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGcc < 1:2245620/100‑1 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGcc < 2:3192854/100‑1 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGcc > 2:3035246/1‑100 (MQ=255) caTTAGCTAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCa > 2:2311741/1‑100 (MQ=255) ttAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACg > 2:1753631/1‑100 (MQ=255) aGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCt > 1:3065298/1‑100 (MQ=255) gCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTg > 1:4134440/1‑100 (MQ=255) ctgcaattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCAGCAACGGCGAGAAAAAATTATCCAGGCCACGCTg > 1:3433165/7‑100 (MQ=38) tgcaattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGTGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTgg > 2:2763975/6‑100 (MQ=255) cAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTgg < 2:3905285/100‑1 (MQ=255) gcaattGTGTACAAATGTACACAATTGCAGAGAGAGTAAATGACAGGCGTCGCGCTAACGTTCCGCAAAGGCGAGAAAAAATTATCCAGGCTACGCTGGa > 1:2278852/5‑100 (MQ=255) caattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAg > 2:859280/4‑100 (MQ=255) aGGTTGTGTACATTTGTACACAATAGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATGCGCAACGGCGTGAAAAAATTATCCAGGCCAGGCTgg < 1:908955/98‑1 (MQ=255) ggTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAgg > 2:3872646/1‑100 (MQ=255) gTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc < 2:3352217/100‑1 (MQ=255) attGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc > 1:2319999/2‑100 (MQ=255) tgtgTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCgg > 1:3210835/1‑100 (MQ=255) tgtACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTg > 2:2562420/1‑100 (MQ=255) tgtACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTg < 1:3594125/100‑1 (MQ=255) gtACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGa > 2:3907140/1‑100 (MQ=255) gtACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGa < 1:2773521/100‑1 (MQ=255) ncATTTGTACACAATTGCAGAGAGAGGAAATGACATGAGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGaaa > 1:2365017/2‑100 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc < 2:3702719/100‑1 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc < 1:2751731/100‑1 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc > 1:4182057/1‑100 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc < 2:3323917/100‑1 (MQ=255) tttGTACACAATTGCAGAGAGAGCAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGCAAAAATTATCCAGACCACGCTGGAGGCGGTGAAACt > 2:3735870/1‑99 (MQ=255) | CCCAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAACT > NC_000913/887294‑887490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |