Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 926,180 A→G 19.3% intergenic (‑209/+45) serW ← / ← infA tRNA‑Ser/translation initiation factor IF‑1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913926,1800AG19.3% 420.2 / 90.4 201intergenic (‑209/+45)serW/infAtRNA‑Ser/translation initiation factor IF‑1
Reads supporting (aligned to +/- strand):  ref base A (75/86);  new base G (24/15);  total (100/101)
Fisher's exact test for biased strand distribution p-value = 1.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 202 total aligned reads displayed.

TAAACAAGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTC  >  NC_000913/926081‑926278
                                                                                                   |                                                                                                  
tAAACAAGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGa                                                                                                    <  1:1659588/100‑1 (MQ=255)
 aaaCAAGTTGTTCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGAc                                                                                                   <  1:2924292/100‑1 (MQ=255)
  aaCAAGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGAcc                                                                                                  >  1:4330428/1‑100 (MQ=255)
  aaCAAGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGAcc                                                                                                  <  1:3754449/100‑1 (MQ=255)
     aaGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCttt                                                                                               <  1:4120776/100‑1 (MQ=255)
      aGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGTCGGTTTAACCGGCCtttt                                                                                              <  2:166522/100‑1 (MQ=255)
      aGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCtttt                                                                                              >  2:2250656/1‑100 (MQ=255)
      aGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCtttt                                                                                              >  2:3804523/1‑100 (MQ=255)
       gTTGTGCAGTATATCTACATCGAGACAAGTTACGTACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCtttt                                                                                              <  1:2881827/99‑1 (MQ=255)
        ttGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTan                                                                                            <  2:2773763/100‑2 (MQ=255)
        ttGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTAc                                                                                            <  2:2545231/100‑1 (MQ=255)
        ttGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTAc                                                                                            <  2:1606332/100‑1 (MQ=255)
           tgCAGTATATGTACATCGAGACAAGTTACCGACATAAACTTTCAAAGTACTTCATACATATCACATAATAAAAAGGTCCGTTTTACCGGCCttttgattt                                                                                         <  1:4300511/100‑6 (MQ=255)
           tgCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCg                                                                                         <  2:4329050/100‑1 (MQ=255)
           tgCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCg                                                                                         <  1:3896001/100‑1 (MQ=255)
             cAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGTCGGTTTAACCGGCCtttttattttg                                                                                       <  2:968186/100‑8 (MQ=37)
             cAGTATAGCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAACAATACCGGTTAAACCGACCGTTTACTCg                                                                                         >  1:1743182/1‑98 (MQ=255)
              aGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttc                                                                                      <  1:1426062/100‑1 (MQ=255)
               gTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGTCGGTTTAACCGGCCtttttattttgtg                                                                                     <  2:1442434/100‑10 (MQ=37)
                tataTCTACATCGAGACAAGTTACGTACTTATACTTCCAAAGTACTTCATACATAGCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctt                                                                                    <  2:1711989/100‑1 (MQ=255)
                tataTCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctt                                                                                    <  2:3669591/100‑1 (MQ=255)
                tataTCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctt                                                                                    >  1:526924/1‑100 (MQ=255)
                 atatCTACATCGAGACAAGTTACGGACTCATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGCCCTTTTAATCGttctat                                                                                   >  1:2801012/1‑98 (MQ=255)
                  tatCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctttc                                                                                  <  2:859137/100‑1 (MQ=255)
                  tatCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctttc                                                                                  <  1:3030778/100‑1 (MQ=255)
                   atCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGttctttct                                                                                 <  2:3987178/100‑1 (MQ=255)
                    tCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTtctc                                                                                >  2:2239963/1‑100 (MQ=255)
                    tCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTtctc                                                                                >  2:2871597/1‑100 (MQ=255)
                     cTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTctct                                                                               <  2:2647353/100‑1 (MQ=255)
                      tACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCtt                                                                              >  2:3130370/1‑100 (MQ=255)
                          tCGAGACCAGTTACCGACTTATACTGCCAAAGTACGTCATACATATCACAAGATAAAAAGGCCGTTTAAACCGACCGTTTACTCGTTCTTTCTCTTCg                                                                            <  1:3837469/98‑1 (MQ=255)
                          tCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGcc                                                                          >  2:2765726/1‑100 (MQ=255)
                           cGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGccc                                                                         >  2:229489/1‑100 (MQ=255)
                            gagaCAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCa                                                                        >  1:3364539/1‑100 (MQ=255)
                            gagaCAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCa                                                                        >  1:3385485/1‑100 (MQ=255)
                               aCAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCa                                                                     >  2:319337/1‑100 (MQ=255)
                                  aGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGc                                                                  <  2:2854234/100‑1 (MQ=255)
                                  aGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGc                                                                  >  1:1250677/1‑100 (MQ=255)
                                   gTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCg                                                                 <  2:3731707/100‑1 (MQ=255)
                                      aCGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTa                                                              <  2:1537140/100‑1 (MQ=255)
                                        ggACTTATACTTGCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAGCCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCGGCGGtcacg                                                           <  2:1206674/100‑5 (MQ=255)
                                         gACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTaaaa                                                           <  2:112658/100‑1 (MQ=255)
                                         gACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTaaaa                                                           >  2:4117261/1‑100 (MQ=255)
                                           cTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACa                                                         >  1:1491744/1‑100 (MQ=255)
                                            ttATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACaa                                                        >  1:970628/1‑100 (MQ=255)
                                                aCTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAg                                                    <  2:1920400/100‑1 (MQ=255)
                                                 cTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGc                                                   <  1:2555770/100‑1 (MQ=255)
                                                 cTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGc                                                   <  1:2378823/100‑1 (MQ=255)
                                                  ttCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCg                                                  <  1:3582927/100‑1 (MQ=255)
                                                  ttCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCg                                                  <  1:260078/100‑1 (MQ=255)
                                                  ttCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCg                                                  >  1:2278544/1‑100 (MQ=255)
                                                   tCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGa                                                 >  1:554251/1‑100 (MQ=255)
                                                         gTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACgg                                           <  1:4008789/100‑1 (MQ=255)
                                                              tCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGAc                                      >  2:3313375/1‑100 (MQ=255)
                                                              tCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGAc                                      <  1:1646781/100‑1 (MQ=255)
                                                              tCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGAc                                      >  2:4058999/1‑100 (MQ=255)
                                                                  acataTCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATg                                  <  1:319336/100‑1 (MQ=255)
                                                                   cataTCACAAAATACAAAGGCCGGTTAAACCGACGTTTTACTCGTTCTTTCGCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATg                                  <  1:1357706/99‑1 (MQ=255)
                                                                   cataTCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGc                                 <  2:3139377/100‑1 (MQ=255)
                                                                   cataTCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGc                                 >  1:489833/1‑100 (MQ=255)
                                                                   cataTCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGc                                 <  2:611206/100‑1 (MQ=255)
                                                                      atCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGc                              <  1:4253580/100‑1 (MQ=255)
                                                                      atCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGc                              >  2:3619045/1‑100 (MQ=255)
                                                                      atCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGc                              <  2:497096/100‑1 (MQ=255)
                                                                       tCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGcc                             >  2:1485096/1‑100 (MQ=255)
                                                                        cacaAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCt                            <  1:3121563/100‑1 (MQ=255)
                                                                        agaacgagtaaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCt                            >  2:2129694/10‑100 (MQ=37)
                                                                         acaAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCtt                           >  1:2634582/1‑100 (MQ=255)
                                                                            cgagtaaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGc                        >  1:2441513/6‑100 (MQ=38)
                                                                            aaaTAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGc                        <  2:3850287/100‑1 (MQ=255)
                                                                              aTAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCCGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTc                      >  2:241504/1‑100 (MQ=255)
                                                                              aTAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTc                      <  2:3546148/100‑1 (MQ=255)
                                                                              aTAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTc                      <  2:1782595/100‑1 (MQ=255)
                                                                               tAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCa                     <  2:3062705/100‑1 (MQ=255)
                                                                               gtaaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCa                     >  2:1830120/3‑100 (MQ=39)
                                                                               gtaaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCa                     >  1:3141533/3‑100 (MQ=38)
                                                                               ataaaaGGTCGGTTTAACCGGCCTCTTACTCGTTCTTTCTCTTCGCCCATCAAGCGGTAAAACAATCATCGACTACGGAAGACAATGCGGCCTTTGCTCa                     >  1:1702857/3‑100 (MQ=255)
                                                                                 aaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAgg                   >  2:2111925/1‑100 (MQ=255)
                                                                                 aaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAgg                   >  2:4093566/1‑100 (MQ=255)
                                                                                 aaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAgg                   >  2:2464541/1‑100 (MQ=255)
                                                                                 aaaaGGTCGGTTTAACCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAgg                   >  1:1144183/1‑100 (MQ=255)
                                                                                 aaaaGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAAACAATGCGGCCTTTGCTCAgg                   >  2:2570343/1‑100 (MQ=255)
                                                                                 aaaaGGCCGGTTAAACCGACCTTTTACTCGTTCTTGCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAgg                   <  1:173488/100‑1 (MQ=255)
                                                                                  aaaGGTCGGTTTAACCTGCCTTTTACTCGTTCTTTCTTTTCGCCTATCAGGCGGTAAAACAATTAGCAACTACGGAAGACCATGCGGCCTTTGCTCAgg                   >  1:1957867/1‑99 (MQ=255)
                                                                                  aaaGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGt                  <  2:3492514/100‑1 (MQ=255)
                                                                                   aacgCCAGTTCAACCGACCTTTTAATCGATCTTTCTATTCGCACATCAGGCGGTACAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTc                 <  1:3678117/97‑1 (MQ=255)
                                                                                   aaGGCCGGTTAAACCGACTTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGc                        <  2:3675976/93‑1 (MQ=255)
                                                                                   aaGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTc                 >  2:3971902/1‑100 (MQ=255)
                                                                                     ggCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGt               >  1:697830/1‑100 (MQ=255)
                                                                                      gCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTa              <  1:2472777/100‑1 (MQ=255)
                                                                                       ccGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTAc             <  2:1402904/100‑1 (MQ=255)
                                                                                          gTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACggg          <  2:2333048/100‑1 (MQ=255)
                                                                                          gTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACgg           <  1:1033495/99‑1 (MQ=255)
                                                                                           ttAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACgggg         <  1:4259203/100‑1 (MQ=255)
                                                                                           ttAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACgggg         <  1:1006700/100‑1 (MQ=255)
                                                                                             tctccGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTc       <  2:2407898/97‑1 (MQ=255)
                                                                                              aaCCGGCCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTc       <  2:1700468/99‑1 (MQ=255)
                                                                                               aCCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAg     <  1:1769531/100‑1 (MQ=255)
                                                                                                ccGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGt    >  2:70613/1‑100 (MQ=255)
                                                                                                  gACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTc  <  2:2617162/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
TAAACAAGTTGTGCAGTATATCTACATCGAGACAAGTTACGGACTTATACTTCCAAAGTACTTCATACATATCACAAAATAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTC  >  NC_000913/926081‑926278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: