| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,543,754 | T→C | 29.1% | T103A (ACG→GCG) | narU ← | nitrate/nitrite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,543,754 | 0 | T | C | 29.1% | 166.0 / 98.2 | 134 | T103A (ACG→GCG) | narU | nitrate/nitrite transporter |
| Reads supporting (aligned to +/- strand): ref base T (47/48); new base C (20/19); total (67/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAAGAGTTG > NC_000913/1543659‑1543850 | gataacgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCa > 1:726369/1‑99 (MQ=255) aacgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCgg < 1:621831/100‑1 (MQ=255) aacgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCgg < 1:1261500/100‑1 (MQ=255) acgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGc > 2:413861/1‑100 (MQ=255) cgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCg < 2:2623861/100‑1 (MQ=255) cgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCg > 2:3974219/1‑100 (MQ=255) cgataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCCAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCgg < 1:3506223/98‑1 (MQ=255) ataaATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTc > 1:199802/1‑100 (MQ=255) taaATATCCTAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTcc < 2:2216832/100‑1 (MQ=255) aaaTATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCa < 2:1056428/100‑1 (MQ=255) atatCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCAcc < 1:905721/100‑1 (MQ=255) tatCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCg < 2:4312942/100‑1 (MQ=255) tatCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCg < 2:3654849/100‑1 (MQ=255) tCCCAAAAGGAGTATTCGGATTTTTCACGGCAATTCGGAGTGAGACGCAAGCAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCAcc < 1:1067895/97‑1 (MQ=255) ccgaaaaGGAGTATTTGGATTTTGCACGGCAATTCCGAGCCATACGCAAGGAATAATCAGCATTCCAGTACTAAAAACCGTCCATCGCTGTCCACCGAat > 1:1916470/4‑100 (MQ=37) ccAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCCAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAata > 2:1795402/1‑100 (MQ=255) ccAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTTCACCGCata > 2:3084319/1‑100 (MQ=255) aaaaGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAAtata < 1:3975645/100‑1 (MQ=255) ggAGTATTCGGATTTTGCACGGCAATTCCGAGCGAGACGCAAGGAGTAATCAGGATTGCAGTACTAAAAGCCGTCCATCGGCGTCCACCGAATATAGGCa < 1:3755530/100‑1 (MQ=255) ggAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGAGTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCa < 1:3306726/100‑1 (MQ=255) gAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCAc > 2:2314625/1‑100 (MQ=255) aGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGGCCACCGAATATAGGCAc < 1:447244/99‑1 (MQ=255) gTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCa > 2:1352033/1‑100 (MQ=255) gTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCa > 1:2333524/1‑100 (MQ=255) tATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCAt < 1:3831582/100‑1 (MQ=255) tATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCAt > 2:3524512/1‑100 (MQ=255) tATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCAt > 2:2431587/1‑100 (MQ=255) tATTCGGATTTTGCACGGCAAGTTCGCGCCAGACGCAATGAATAATAACGATTGAAATACTAATAACCGTATAACGGAGTCCACAGaag < 1:612748/89‑2 (MQ=255) aTTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATa > 1:2835208/1‑100 (MQ=255) aTTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATa > 1:3136056/1‑100 (MQ=255) ttCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATaa > 2:498297/1‑100 (MQ=255) ttCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATaa > 2:3912012/1‑100 (MQ=255) ttCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATaa < 2:4332834/100‑1 (MQ=255) ttCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATaa > 2:3106219/1‑100 (MQ=255) tCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATaaa > 1:2501801/1‑100 (MQ=255) tCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATaaa < 2:3707591/100‑1 (MQ=255) tCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATaaa < 1:3058490/100‑1 (MQ=255) ggATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAgg < 1:156627/100‑1 (MQ=255) ggATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAgg > 2:3907296/1‑100 (MQ=255) ggATTGTGCACGGCAATTCAGAGCGAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAgg < 1:1225239/100‑1 (MQ=255) aTTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGCATGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGa > 1:1952285/1‑99 (MQ=255) aTTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAg < 2:3145033/100‑1 (MQ=255) ttGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAg < 2:1251015/100‑1 (MQ=255) gCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAggg < 2:2215642/100‑1 (MQ=255) cGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAAGCGTCCATAGGCGTCCACAAAATATAGGCCACATAAAGGAGTAGGGAac > 1:1053284/1‑100 (MQ=38) cGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGaa < 1:646398/99‑1 (MQ=255) cGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGaa > 1:888788/1‑99 (MQ=255) ggCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAaca < 1:3486741/100‑1 (MQ=255) ggCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAaca > 2:3985315/1‑100 (MQ=255) cAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCAACGAATATTGGCACGATAACGGAGTAGGGAACACg > 1:2463855/1‑100 (MQ=37) aaTTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGc < 2:872897/100‑1 (MQ=255) aTTCCGAGCCAGACGCACGGAATAATCAGGATTGCAGTACTAAAAACCGTCCAACGGCGTGCACCGAATATACGCACCATAAAGGAGGAGTGAgcac > 1:957260/1‑97 (MQ=255) aTTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGc < 1:4166466/99‑1 (MQ=255) ccGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCaata > 1:1265301/1‑100 (MQ=255) ccGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCaata > 2:2452749/1‑100 (MQ=255) ccGAACCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATAGGCGTCAACCGAATATAGGCACCATAAAGGAGTAGGGAAAACGCaata > 1:1991310/1‑100 (MQ=37) gAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCaataat > 2:4372252/1‑100 (MQ=255) aGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGcc > 1:3157981/1‑100 (MQ=255) aCGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAg < 2:635040/100‑1 (MQ=255) cGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGCACATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGa > 1:2357409/1‑100 (MQ=255) cAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGaaa > 2:1671559/1‑100 (MQ=255) cAAGGAATAATCAGGATTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGaaa > 2:2282700/1‑100 (MQ=255) aGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACg < 1:2100452/100‑1 (MQ=255) ggAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACgg < 1:393626/100‑1 (MQ=255) ggAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACgg < 2:2501814/100‑1 (MQ=255) gAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGa > 2:1370360/1‑100 (MQ=255) aataatCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAg > 2:2941774/1‑100 (MQ=255) ataatCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAgg < 2:1953360/100‑1 (MQ=255) tCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAggg > 1:3761272/1‑97 (MQ=255) aTTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCgg < 2:709482/100‑1 (MQ=255) aTTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCgg < 2:2936342/100‑1 (MQ=255) aTTGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCgg < 1:2611498/100‑1 (MQ=255) tGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGtt < 2:3395075/100‑1 (MQ=255) tGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGt < 1:1863101/99‑1 (MQ=255) tGCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGtt < 2:2833291/100‑1 (MQ=255) gCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTta < 1:4079863/100‑1 (MQ=255) gCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTta < 2:374603/100‑1 (MQ=255) gCAGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTta > 2:4234201/1‑100 (MQ=255) aGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTtaat < 2:451519/100‑1 (MQ=255) aGTACTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTtaat < 2:3395938/100‑1 (MQ=255) gTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTtaata > 2:3274821/1‑100 (MQ=255) gTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTtaata > 1:2428040/1‑100 (MQ=255) cTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATaaaa < 1:1048529/100‑1 (MQ=255) cTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATaaaa > 2:729154/1‑100 (MQ=255) cTAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATaaaa > 2:14370/1‑100 (MQ=255) tAAAAACCGTCGATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACTCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATaaaaa < 1:3287434/100‑1 (MQ=255) tAAAAACCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATaaaaa > 2:778734/1‑100 (MQ=255) aaaaaCCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAGTGCGCCAGAAACTGCGGGTAATGCGGTTAATCAAAag > 2:1885284/1‑100 (MQ=255) aaaaaCCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAag < 2:2563475/100‑1 (MQ=255) aaaaaCCGCCGATCGGCGTCCACCAAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAag < 1:3473508/100‑1 (MQ=255) aaaaaCCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAag > 1:772907/1‑100 (MQ=255) aaaaaCCATCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAag > 1:3396001/1‑100 (MQ=255) aaaaCCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAaga > 1:467944/1‑100 (MQ=255) aaaaCCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGGAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAaga > 2:1882516/1‑100 (MQ=255) aaaaCCGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAaga > 1:3830211/1‑100 (MQ=255) aaaCCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAagag < 1:2080795/100‑1 (MQ=255) aaaCCGCCCATCGTCGTTCAGCGAATATAGGCAGCACAAAGGAGTAGGGAACCCGCAATAATGCGCCAGAAACGGAGGGTAATGCGGtt > 1:2982918/1‑89 (MQ=255) aaCCGCCCATCGGCGTCCACCGAATATAGGCACCATCAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAAGAGt < 1:2431576/100‑1 (MQ=255) ccGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAAGAGTTg < 1:3191231/100‑1 (MQ=255) ccGCCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGCACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAAGAGTTg > 1:3786393/1‑100 (MQ=255) | GATAACGATAAATATCCCAAAAGGAGTATTCGGATTTTGCACGGCAATTCCGAGCCAGACGCAAGGAATAATCAGGATTGCAGTACTAAAAACCGTCCATCGGCGTCCACCGAATATAGGCACCATAAAGGAGTAGGGAACACGCAATAATGCGCCAGAAACGGAGGGTAATGCGGTTAATAAAAAGAGTTG > NC_000913/1543659‑1543850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |