BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	284,372	Δ1 bp	coding (1172/1968 nt)	yagF →	CP4‑6 prophage; dehydratase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	284,370	0	G	.	100.0%	469.2 / NA	99	coding (1170/1968 nt)	yagF	CP4‑6 prophage; dehydratase family protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (44/55); total (44/55)

Only 100 of 105 total aligned reads displayed.

GCGCCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGAT  >  NC_000913/284273‑284465

gcgcCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTggc                                                                                               >  2:2594542/1‑99 (MQ=255)

gcgcCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTggc                                                                                               >  1:2745979/1‑99 (MQ=255)

 cgcCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTggcg                                                                                              <  2:1958093/100‑3 (MQ=255)

   ccTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTggcgag                                                                                            >  2:570043/1‑96 (MQ=255)

        cTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGTCGGT‑GGCGAGAACCt                                                                                      >  1:3345414/1‑100 (MQ=255)

         tCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCtt                                                                                     <  1:161580/100‑1 (MQ=255)

          cgcgGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTg                                                                                    <  1:963042/100‑1 (MQ=255)

          cgcgGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTg                                                                                    <  2:2795885/100‑1 (MQ=255)

          cgcgGGCGGCGTGCCGGAGGTGATGCTCCACCCGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTg                                                                                    >  1:3221005/1‑100 (MQ=255)

            cgggcggCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGaa                                                                                  >  2:1330208/1‑100 (MQ=255)

             gggcggCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAt                                                                                 <  1:1676770/100‑1 (MQ=255)

             gggcggCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAt                                                                                 <  2:2628544/100‑1 (MQ=255)

              ggcggcGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAtg                                                                                <  2:3345401/100‑1 (MQ=255)

               gcggcgTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAtgg                                                                               <  1:2873763/100‑1 (MQ=255)

                 ggcgTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAtggtg                                                                             <  2:1739781/100‑1 (MQ=255)

                 ggcgTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAtggtg                                                                             <  2:2039056/100‑1 (MQ=255)

                  gcgTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAAtggtgg                                                                            >  2:3244231/1‑100 (MQ=255)

                      gCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAgg                                                                        <  1:3248522/100‑1 (MQ=255)

                      gCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAgg                                                                        <  1:3255259/100‑1 (MQ=255)

                      gCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAgg                                                                        <  1:1119569/100‑1 (MQ=255)

                      gCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAgg                                                                        <  2:658196/100‑1 (MQ=255)

                      gCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAgg                                                                        <  2:355087/100‑1 (MQ=255)

                            ggTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCg                                                                  >  2:692268/1‑100 (MQ=255)

                              tGATGTTCCACCTGCGCGACCTCGGCCTGCTGCATCTGTACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAg                                                                <  1:184087/100‑1 (MQ=255)

                              tGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAg                                                                >  2:3171544/1‑100 (MQ=255)

                               gATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAgc                                                               >  2:349671/1‑100 (MQ=255)

                                aTGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAgcg                                                              <  2:2745969/100‑1 (MQ=255)

                                aTGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAgcg                                                              <  1:2939934/100‑1 (MQ=255)

                                 tGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAgcg                                                              >  2:2335636/1‑99 (MQ=255)

                                   cTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCg                                                           >  1:1618574/1‑100 (MQ=255)

                                    tCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCgg                                                          >  1:195322/1‑100 (MQ=255)

                                    tCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCgg                                                          >  2:2934079/1‑100 (MQ=255)

                                    tCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCgg                                                          >  2:2506488/1‑100 (MQ=255)

                                     ccACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCggg                                                         >  2:1740926/1‑100 (MQ=255)

                                        ccTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgc                                                      >  1:2831531/1‑100 (MQ=255)

                                        ccTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgc                                                      <  1:1330211/100‑1 (MQ=255)

                                        ccTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgc                                                      >  1:1205805/1‑100 (MQ=255)

                                         cTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgcg                                                     >  2:1364951/1‑100 (MQ=255)

                                         cTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgcg                                                     <  1:1427850/100‑1 (MQ=255)

                                         cTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgcg                                                     >  1:1906715/1‑100 (MQ=255)

                                          tGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGgcgcgc                                                    <  1:349672/100‑1 (MQ=255)

                                           gcgcGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCt                                                   <  1:1021489/100‑1 (MQ=255)

                                                aCCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGc                                              >  2:3002699/1‑100 (MQ=255)

                                                 ccTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGcc                                             <  2:1738048/100‑1 (MQ=255)

                                                 ccTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGcc                                             >  2:1672346/1‑100 (MQ=255)

                                                 ccTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGcc                                             <  2:1150593/100‑1 (MQ=255)

                                                   tCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAg                                           <  1:794811/100‑1 (MQ=255)

                                                       ccTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGcc                                       <  1:2847073/100‑1 (MQ=255)

                                                       ccTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGcc                                       <  1:3301622/100‑1 (MQ=255)

                                                          gctgcATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTgc                                    >  2:1202057/1‑100 (MQ=255)

                                                            tgcATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTgcgc                                  >  2:725154/1‑100 (MQ=255)

                                                             gcATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGcgcg                                 <  2:448406/100‑1 (MQ=255)

                                                             gcATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGcgcg                                 <  2:448334/100‑1 (MQ=255)

                                                             gcATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGcgcg                                 >  2:1808641/1‑100 (MQ=255)

                                                              cATCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGa                                <  2:2775690/100‑1 (MQ=255)

                                                                tCTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGc                              <  1:1202060/100‑1 (MQ=255)

                                                                 cTGGACGCCATGGCCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGc                              <  1:2519334/99‑1 (MQ=255)

                                                                 cTGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCa                             >  2:503009/1‑100 (MQ=255)

                                                                  tGGACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATAGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAg                            <  2:2507147/100‑1 (MQ=255)

                                                                   ggACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAgg                           >  2:1537254/1‑100 (MQ=255)

                                                                   ggACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAgg                           >  2:1536064/1‑100 (MQ=255)

                                                                   ggACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAgg                           >  2:2592870/1‑100 (MQ=255)

                                                                    gACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGa                          >  1:1671401/1‑100 (MQ=255)

                                                                    gACGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGa                          >  2:1564690/1‑100 (MQ=255)

                                                                     aCGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGAc                         >  1:410444/1‑100 (MQ=255)

                                                                     aCGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGAc                         <  2:2462552/100‑1 (MQ=255)

                                                                     aCGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGAc                         <  1:2594550/100‑1 (MQ=255)

                                                                     aCGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGAc                         <  2:2024782/100‑1 (MQ=255)

                                                                      cGCCATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACg                        >  1:1993886/1‑100 (MQ=255)

                                                                        ccATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGc                      >  1:3107019/1‑100 (MQ=255)

                                                                        ccATGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGc                      >  1:2001705/1‑100 (MQ=255)

                                                                          aTGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGt                    <  1:993479/100‑1 (MQ=255)

                                                                          aTGACCGTGACCGGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGt                    >  1:209626/1‑100 (MQ=255)

                                                                           tgaccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTa                   <  1:480153/100‑1 (MQ=255)

                                                                           tgaccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTa                   >  2:1877237/1‑100 (MQ=255)

                                                                            gaccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTag                  >  1:896940/1‑100 (MQ=255)

                                                                            gaccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTag                  <  1:1289739/100‑1 (MQ=255)

                                                                            gaccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTag                  <  2:112859/100‑1 (MQ=255)

                                                                             accgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTaga                 <  1:1503691/100‑1 (MQ=255)

                                                                              ccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTagag                <  2:1899141/100‑1 (MQ=255)

                                                                              ccgtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTagag                <  1:3229412/100‑1 (MQ=255)

                                                                                gtgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGcc              >  2:1265930/1‑100 (MQ=255)

                                                                                 tgaccgGCCAGGCGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCg             >  2:485908/1‑100 (MQ=255)

                                                                                 tgaccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCg             <  1:692268/100‑1 (MQ=255)

                                                                                   accgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGa           >  1:2898614/1‑100 (MQ=255)

                                                                                   accgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGa           <  1:1142605/100‑1 (MQ=255)

                                                                                   accgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGa           <  2:556550/100‑1 (MQ=255)

                                                                                    ccgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGAt          >  1:1566600/1‑100 (MQ=255)

                                                                                     cgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATg         <  2:3220992/100‑1 (MQ=255)

                                                                                     cgGCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATg         >  2:2564114/1‑100 (MQ=255)

                                                                                      ggCCAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGa        >  2:400365/1‑100 (MQ=255)

                                                                                      ggCCAGACGGT‑GGCGAGAACCTTGAAGGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGa        >  1:2075892/1‑100 (MQ=255)

                                                                                        ccAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACg      <  2:744683/100‑1 (MQ=255)

                                                                                         cAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGt     <  2:1662451/100‑1 (MQ=255)

                                                                                         cAGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGt     >  2:2344402/1‑100 (MQ=255)

                                                                                          aGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTg    <  2:3192269/100‑1 (MQ=255)

                                                                                          aGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTg    <  2:753920/100‑1 (MQ=255)

                                                                                          aGACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTg    <  2:797181/100‑1 (MQ=255)

                                                                                           gACGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGa   <  1:1770898/100‑1 (MQ=255)

                                                                                            aCGGT‑GGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGAt  <  2:1612330/100‑1 (MQ=255)

GCGCCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGAT  >  NC_000913/284273‑284465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`